PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 0300010311
Common NameOt03g03110, OT_ostta03g03120
Organism
Ostreococcus tauri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family bZIP
Protein Properties Length: 172aa    MW: 18218.5 Da    PI: 9.9695
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
0300010311genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.8e-14113167155
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                 e+  k+ rrk++NRe+ArrsR+RK+ae +      ++L +eN +Lk+e+++l++e
  0300010311 113 EETTKKIRRKESNRESARRSRLRKQAEAADIGAQLEALREENAKLKEENQKLREE 167
                 6789************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-13109169No hitNo description
PfamPF001702.8E-12113167IPR004827Basic-leucine zipper domain
SMARTSM003383.1E-9113170IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.461115171IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.53E-9117168No hitNo description
CDDcd147022.39E-19118168No hitNo description
PROSITE patternPS000360120135IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MGAPTHEGSG LNWSVPSSGM GWTPNLQQYM NGVALAQAAA AAAAASAPKG HATVSEAPSP  60
SIMGPYPLLN LPQPIGVPQF GPTGFFQAPG FTGLPAPGFP PGLEGNHVVT KEEETTKKIR  120
RKESNRESAR RSRLRKQAEA ADIGAQLEAL REENAKLKEE NQKLREELGR R*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129135RRSRLRK
2129136RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003078222.11e-120Basic-leucine zipper domain
TrEMBLQ01CJ11e-119Q01CJ1_OSTTA; Basic-leucine zipper domain
STRINGQ01CJ11e-120(Ostreococcus tauri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4426911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.16e-12basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Derelle E, et al.
    Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.
    Proc. Natl. Acad. Sci. U.S.A., 2006. 103(31): p. 11647-52
    [PMID:16868079]