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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Coffea canephora
bHLH FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------ Cc01_g04410/365-410 (1) | |------------------------------------------------------------------ Cc02_g27520/256-301 (60) | | /------- Cc02_g39830/234-279 (2) | /--100--+ | | \------- Cc08_g16790/256-301 (81) | /--94--+ | | \--------------- Cc08_g02790/513-558 (87) | /-------------97-------------+ | | | /------- Cc02_g39470/439-485 (59) | | \------68------+ | | \------- Cc01_g18590/324-370 (120) | | | | /------- Cc04_g17160/10-59 (3) | | /---55--+ | | | \------- Cc11_g13270/19-59 (98) | | /--59--+ | | | \--------------- Cc07_g03240/22-58 (96) | |-------------100------------+ | | \---------------------- Cc04_g17060/14-53 (85) | | | | /------- Cc10_g04630/135-181 (4) | | /--100--+ | | | \------- Cc07_g06130/152-198 (21) | | /--83--+ | | | | /------- Cc00_g02210/249-295 (36) | | | \--100--+ | | | \------- Cc02_g24640/305-351 (116) | |-------------100------------+ | | | /--------------- Cc05_g00300/346-392 (19) | | | | | | \--53--+ /------- Cc01_g17430/345-391 (39) | | \---95--+ | | \------- Cc02_g35910/448-494 (50) | | | | /------- Cc05_g07310/15-62 (5) | | /---62--+ | | | \------- Cc05_g07300/14-62 (90) | | /--100-+ | | | \--------------- Cc05_g07290/15-62 (57) | | /--100-+ | | | \---------------------- Cc05_g07320/15-62 (130) | | | | | | /------- Cc04_g13690/16-65 (24) | | /--100--+ /---57--+ | | | | | \------- Cc04_g13700/15-65 (46) | | | | /--100-+ | | | | | \--------------- Cc00_g31280/16-64 (70) | | | \--69--+ | | | \---------------------- Cc02_g13460/12-59 (110) | | | | | | /--------------- Cc02_g03670/138-190 (12) | | | | | | | /--87--+ /------- Cc08_g13700/65-116 (18) | | /--72--+ | \--100--+ | | | | | \------- Cc08_g13690/75-123 (34) | | | | /--67--+ | | | | | |---------------------- Cc02_g28190/92-143 (37) | | | | | | | | | |--100--+ \---------------------- Cc02_g03660/99-149 (119) | |--59--+ | | | | | | \----------------------------- Cc02_g28210/96-147 (25) | | | | | | | \------------------------------------- Cc11_g14670/15-91 (49) | | | | | \-------------------------------------------- Cc06_g19110/65-117 (160) | | | |--------------------------------------------------- Cc02_g26300/261-307 (6) | | | | /--------------- Cc07_g15720/101-147 (7) | | | | | /------64-----+ /------- Cc10_g08770/125-171 (13) | | | \--100--+ | | | \------- Cc10_g08760/34-80 (41) | | | | | | /------- Cc02_g34070/165-210 (54) | | | /---76--+ | | | | \------- Cc02_g34040/45-90 (79) | | | | | |----------82---------+ |--------------- Cc02_g34100/167-212 (58) | | | | | | | |--------------- Cc02_g34000/165-210 (86) | | | /--89--+ | | | | |--------------- Cc02_g34020/159-204 (97) | | | | | | | | | |--------------- Cc00_g24080/105-150 (99) | | \--64--+ | | | | \--------------- Cc02_g34090/138-183 (111) | | | | | \---------------------- Cc02_g20420/158-205 (122) | | | | /----------------------------- Cc02_g11750/81-135 (8) | | | | | | /------- Cc04_g16930/39-88 (9) | | | /--100--+ | | | | \------- Cc07_g03280/31-63 (88) | | | /--76--+ | |---------100---------+ | | /------- Cc02_g16520/57-106 (82) | | | | \---66--+ | | |--51--+ \------- Cc07_g10760/35-69 (84) | | | | | | | \---------------------- Cc05_g13180/78-125 (94) | | | | | \----------------------------- Cc03_g05370/87-134 (20) | | | | /------- Cc11_g09940/152-199 (10) | | /--100--+ | | | \------- Cc00_g29370/57-104 (150) | | | | | |--------------- Cc06_g16420/200-247 (31) | | | | | | /------- Cc11_g13820/165-212 (45) | | |---97--+ | | | \------- Cc04_g16030/160-207 (51) | | | | | |--------------- Cc10_g07710/4-32 (62) | | | | | /--100-+--------------- Cc03_g09600/282-329 (67) | | | | | | | |--------------- Cc11_g11360/369-417 (75) + | | | | | | | /------- Cc07_g09660/147-194 (80) | /---96--+ | |---53--+ | | | | | \------- Cc02_g17440/241-288 (180) | | | /--68--+ | | | | | | |--------------- Cc01_g16390/322-369 (115) | | | | | | | | | | | \--------------- Cc04_g09420/204-251 (120) | | | | | | | |----------89---------+ | /------- Cc00_g20690/153-197 (11) | | | | \------97------+ | | | | \------- Cc01_g18880/162-206 (69) | | | | | | | \----------------------------- Cc06_g15180/231-276 (74) | | | | | | /---------------------- Cc06_g17490/44-86 (14) | | | | | | | /--66--+ /--------------- Cc00_g07200/49-93 (38) | | | | | | | | | | \--87--+ /------- Cc00_g16650/48-92 (66) | | | /---56--+ \--100--+ | | | | | \------- Cc00_g27610/49-92 (93) | | | | | | | | /--62--+ \----------------------------- Cc02_g11910/50-89 (52) | | | | | | | | | \------------------------------------- Cc01_g16050/342-385 (83) | | | | | | | | /------- Cc07_g14500/98-149 (15) | | | | /--100--+ | | | | | \------- Cc10_g06580/137-188 (42) | | | | /--95--+ | | | | | \--------------- Cc02_g33760/119-170 (64) | | | | /--88--+ | | | | | \---------------------- Cc08_g02950/108-159 (47) | | | | /---68--+ | | | | | \----------------------------- Cc03_g07740/203-254 (27) | | |--68--+--100-+ | | | | | /------- Cc02_g01870/115-166 (29) | | | | \--------------95-------------+ | | | | \------- Cc03_g03160/2-49 (92) | | | | | | | |-------------------------------------------- Cc01_g10310/127-169 (17) | | | | | | | | /--------------- Cc08_g01730/89-131 (56) | | | | | | | | | | /------- Cc07_g07810/193-236 (77) | | | | /--100-+--100--+ | | | | | | \------- Cc10_g08200/145-188 (114) | | | | | | | | | \----------96---------+ \--------------- Cc00_g12270/440-482 (89) | | | | | | | \---------------------- Cc04_g12140/391-435 (63) | | | | | | /--------------- Cc07_g08110/241-283 (16) | | | | | | | /--89--+ /------- Cc10_g05680/292-332 (32) | | | | \---91--+ | | | /--67--+ \------- Cc02_g19780/325-365 (53) | | | | | | | | /---55--+ \---------------------- Cc06_g01040/42-84 (35) |--100-+ | | | | | | | \----------------------------- Cc00_g30020/167-207 (78) | | | | | | | |------------------------------------- Cc04_g02340/333-373 (91) | | |------79-----+ | | | | /------- Cc05_g05320/212-252 (112) | | | |--------------71-------------+ | | | | \------- Cc02_g35090/180-224 (113) | | | | | | | \------------------------------------- Cc09_g09510/187-223 (117) | | | | | |--------------------------------------------------- Cc01_g19690/165-213 (22) | | | | | |--------------------------------------------------- Cc01_g19570/513-559 (23) | | | | | | /------- Cc06_g10030/197-235 (26) | | | /---53--+ | | | | \------- Cc04_g02910/212-250 (140) | | | /--68--+ | | | | \--------------- Cc07_g09990/306-345 (170) | | | /--90--+ | | | | \---------------------- Cc10_g02500/332-370 (110) | | | /---65--+ | | | | \----------------------------- Cc05_g12920/367-405 (48) | | | /--50--+ | | | | \------------------------------------- Cc02_g11950/360-397 (65) | | |--100-+ | | | | /------- Cc02_g08220/6-45 (68) | | | \-----------------86-----------------+ | | | \------- Cc03_g14090/41-73 (100) | | | | | | /------- Cc02_g14830/79-126 (28) | | | /---67--+ | | | | \------- Cc02_g06200/79-125 (71) | | | | | | | |--------------- Cc07_g14210/52-98 (33) | | | | | | |-----------------69----------------+--------------- Cc11_g10650/134-180 (40) | | | | | | | |--------------- Cc05_g08220/61-107 (44) | | | | | | | \--------------- Cc06_g19820/73-100 (72) | | | | | |--------------------------------------------------- Cc08_g14790/445-491 (30) | | | | | | /------- Cc03_g04820/90-138 (43) | | |---------------------83--------------------+ | | | \------- Cc06_g11520/361-405 (73) | | | | | | /------- Cc04_g08190/261-312 (95) | | | /---66--+ | | | | \------- Cc07_g04540/27-59 (121) | | |----------------100----------------+ | | | \--------------- Cc11_g11510/46-95 (190) | | | | | \--------------------------------------------------- Cc02_g18940/95-138 (118) | | | \----------------------------------------------------------- Cc10_g10020/210-255 (61) | | /------- Cc03_g10250/305-350 (55) \----------------------------88----------------------------+ \------- Cc06_g16390/349-394 (76) |
Phylogenetic tree for protein ? help Back to Top |
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/------------------------------------------------------------------ Cc06_g10030 (1) | |------------------------------------------------------------------ Cc04_g02910 (10) | | /----- Cc10_g08200 (2) | /-100-+ | | \----- Cc07_g07810 (53) | /------------99------------+ | | | /----- Cc00_g12270 (6) | | \-100-+ | | \----- Cc08_g01730 (115) | | | | /----- Cc02_g34090 (7) | | /--95-+ | | | \----- Cc02_g34070 (79) | | | | | |----------- Cc02_g20420 (15) | | | | | | /----- Cc10_g08770 (24) | | |-100-+ | | | \----- Cc10_g08760 (94) | | | | | |----------- Cc02_g34040 (25) | |------------58------------+ | | |----------- Cc02_g34020 (47) | | | | | |----------- Cc02_g34000 (56) | | | | | |----------- Cc02_g34100 (65) | | | | | |----------- Cc07_g15720 (71) | | | | | \----------- Cc00_g24080 (74) | | | |-------------------------------------- Cc02_g26300 (9) | | | | /----------- Cc02_g33760 (11) | | | | | /-76-+ /----- Cc07_g14500 (86) | | | \--84-+ | | /--80-+ \----- Cc10_g06580 (170) | | | | | | | \---------------- Cc08_g02950 (70) | |-------99------+ | | | /----------- Cc03_g07740 (63) | | | | | | \----99----+ /----- Cc03_g03160 (77) | | \-100-+ | | \----- Cc02_g01870 (121) | | | | /----------- Cc00_g07200 (12) | | | | | /-74-+ /----- Cc00_g27610 (60) | | | \--98-+ | | /-100-+ \----- Cc00_g16650 (130) | | | | | |-------65------+ \---------------- Cc06_g17490 (64) | | | | | \---------------------- Cc01_g10310 (150) | | | | /----- Cc01_g18590 (13) | | /----100---+ | | | \----- Cc02_g39470 (35) | | | | | /-100-+ /----- Cc08_g16790 (43) | | | | /-100-+ | | | | | \----- Cc02_g39830 (88) | | | \-89-+ | |-------71------+ \----------- Cc08_g02790 (180) | | | | | | /----- Cc01_g19570 (51) | | \-------100------+ | | \----- Cc08_g14790 (119) | | | | /----- Cc07_g03240 (14) | | | | | /--62-+----- Cc04_g17060 (69) | | | | | |------------100-----------+ \----- Cc11_g13270 (120) | /--70-+ | | | | \----------- Cc04_g17160 (55) | | | | | | /---------------------- Cc02_g13460 (16) | | | | | | | | /----- Cc05_g07310 (29) | | | | /-100-+ | | | /-95-+ | \----- Cc05_g07290 (99) | | | | | /-98-+ | | | | | | \----------- Cc05_g07300 (160) | | | | \-100-+ | | | /--63-+ \---------------- Cc05_g07320 (90) | | | | | | | | | | /----------- Cc04_g13700 (76) | | | | | | | | | | \------100------+ /----- Cc00_g31280 (190) | | | | \--72-+ | | | | \----- Cc04_g13690 (122) | | | | | | | |--------------------------------- Cc06_g19110 (18) | | | | | | | | /----- Cc08_g13690 (20) | | |-67-+ /--93-+ | | | | | \----- Cc08_g13700 (73) | | | | | | | | | |----------- Cc02_g03670 (37) | | | |----------98---------+ | | | | | /----- Cc02_g28190 (39) | | | | | | | | | | \-100-+----- Cc02_g03660 (61) | | | | | | | | | \----- Cc02_g28210 (87) | | | | | | | \--------------------------------- Cc11_g14670 (96) | | | + | |-------------------------------------- Cc03_g04820 (21) | | | | | | /----- Cc07_g03280 (23) | | | /--99-+ | | | | \----- Cc04_g16930 (82) | | | /-82-+ | | | | \----------- Cc02_g16520 (75) | | | | | | | |---------------- Cc07_g10760 (48) | | |----------72---------+ | | | | /----- Cc05_g13180 (58) | | | | /--93-+ | | | | | \----- Cc02_g11750 (78) | | | \-99-+ | | | \----------- Cc03_g05370 (59) | | | | | |-------------------------------------- Cc02_g11910 (27) | | | | | |-------------------------------------- Cc06_g11520 (41) | | | | | | /----- Cc07_g14210 (42) | | | | | | | |----- Cc11_g10650 (46) | | | /--65-+ | | | | |----- Cc02_g06200 (72) | | | | | | | |------------89------------+ \----- Cc06_g19820 (98) | | | | | | | | /----- Cc05_g08220 (95) | | | \--99-+ | | | \----- Cc02_g14830 (112) | | | | | |-------------------------------------- Cc04_g12140 (44) | | | | | |-------------------------------------- Cc02_g18940 (85) | | | | | \-------------------------------------- Cc01_g16050 (111) | | | | /----- Cc06_g16390 (3) | | | | | /--95-+----- Cc01_g04410 (17) | /-87-+ | | | | | /-88-+ \----- Cc02_g27520 (54) | | | | | | | |-------------87------------+ \----------- Cc03_g10250 (100) | | | | | | | \---------------- Cc10_g10020 (8) | | | | | | /--------------------------- Cc10_g07710 (4) | | | | | | | | /----- Cc03_g09600 (22) | | | | /-------100------+ | | | | | \----- Cc01_g16390 (33) | | | | | | | | | | /----------- Cc06_g16420 (34) | | | |-80-+ | | | | | | /-81-+ /----- Cc11_g13820 (81) | | | | | | \-100-+ | | | | \--51-+ \----- Cc04_g16030 (91) | | |-------61-------+ | | | | | \---------------- Cc11_g11360 (38) | | | | | | | |--------------------------- Cc04_g09420 (45) | | | | | | | |--------------------------- Cc07_g09660 (67) | | | | | | | | /----- Cc00_g29370 (68) | | | |---------100---------+ | | | | \----- Cc11_g09940 (92) | | | | | | | \--------------------------- Cc02_g17440 (117) | | | | | | /----- Cc01_g18880 (19) | | | /-100-+ | | | | \----- Cc00_g20690 (30) | | |---------------93---------------+ | | | \----------- Cc06_g15180 (32) | | | | | | /----- Cc00_g30020 (26) | | | /--76-+ | /--60-+ | | \----- Cc04_g02340 (116) | | | |---------------80---------------+ | | | | \----------- Cc06_g01040 (28) | | | | | | | | /----- Cc10_g04630 (31) | | | | /----100---+ | | | | | \----- Cc07_g06130 (52) | | | | | | | | | /--86-+ /----------- Cc02_g35910 (49) | | | | | | | | | | | | \-96-+ /----- Cc01_g17430 (62) | | | | | \-100-+ | | | |----------85---------+ \----- Cc05_g00300 (110) | | | | | | | | | | /----- Cc00_g02210 (80) | | | | \-------100------+ | | | | \----- Cc02_g24640 (114) | | | | | | | | /----- Cc02_g35090 (36) | | | |------------------76------------------+ | /-68-+ | | \----- Cc05_g05320 (113) | | | | | | | | | | /----- Cc02_g19780 (40) | | | | |------------------91------------------+ | | | | | \----- Cc10_g05680 (84) | | | | | | | | | | /----- Cc07_g04540 (50) | | | | | | | | | | |------------------99------------------+----- Cc04_g08190 (89) | | | | | | | | | | | \----- Cc11_g11510 (93) | | | | | | | | | |-------------------------------------------- Cc01_g19690 (57) | | | | | \--91-+ | | |-------------------------------------------- Cc09_g09510 (66) | | | | | | | \-------------------------------------------- Cc07_g08110 (120) | | | | | \------------------------------------------------- Cc02_g08220 (118) | | | \------------------------------------------------------- Cc03_g14090 (83) | | /----- Cc07_g09990 (5) |--------------------------91--------------------------+ | \----- Cc10_g02500 (97) | | /----- Cc05_g12920 (110) \--------------------------100-------------------------+ \----- Cc02_g11950 (140) |