PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Castanea mollissima
NAC FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------- maker-scaffold09484-snap-gene-0.17-mRNA-1/10-138 (1) | | /--------------- maker-scaffold02829-snap-gene-0.27-mRNA-1/13-140 (2) | | | | /----- maker-scaffold15610-augustus-gene-0.4-mRNA-1/10-137 (16) | /---------91---------+ /-100+ | | | | \----- maker-scaffold12065-snap-gene-0.6-mRNA-1/16-143 (46) | | \-81-+ | | | /----- maker-scaffold08573-augustus-gene-0.8-mRNA-1/20-142 (31) | | \-100+ | | \----- augustus_masked-scaffold03666-abinit-gene-0.5-mRNA-1/20-143 (59) | | | | /----- maker-scaffold00745-snap-gene-0.42-mRNA-1/8-133 (3) | | /-------87------+ | | | \----- maker-scaffold03032-augustus-gene-0.24-mRNA-1/1-98 (48) | | | | | | /---------- maker-scaffold04107-augustus-gene-0.9-mRNA-1/15-143 (32) | | | | | | | /-78-+ /----- augustus_masked-scaffold02790-abinit-gene-0.8-mRNA-1/8-137 (63) | | | | \-81-+ | | /-100+--89-+ \----- maker-scaffold00018-augustus-gene-0.30-mRNA-1/15-143 (89) | | | | | | | | | \--------------- maker-scaffold08294-augustus-gene-0.4-mRNA-1/12-141 (84) | | | | | | | |--------------------- maker-scaffold00057-snap-gene-0.53-mRNA-1/36-164 (72) | | | | | | | \--------------------- maker-scaffold02656-augustus-gene-0.15-mRNA-1/7-136 (74) | | | | | | /---------- maker-scaffold04399-augustus-gene-0.11-mRNA-1/16-143 (4) | | | | | |----54---+ /-56-+ /----- maker-scaffold01655-augustus-gene-0.20-mRNA-1/16-142 (37) | | | | \-99-+ | | | | \----- maker-scaffold04981-augustus-gene-0.2-mRNA-1/16-142 (38) | | | | | | | /--85-+ /---------- maker-scaffold01684-snap-gene-0.33-mRNA-1/18-174 (8) | | | | | | | | | | | | /----- augustus_masked-scaffold12148-abinit-gene-0.2-mRNA-1/28-155 (18) | | | | \-89-+-100+ | | | | | \----- maker-scaffold00345-augustus-gene-0.38-mRNA-1/5-131 (82) | | \-95-+ | | | | \---------- augustus_masked-scaffold02867-abinit-gene-0.1-mRNA-1/14-142 (70) | | | | | | /----- augustus_masked-scaffold00534-abinit-gene-0.10-mRNA-1/10-138 (13) | | \------100------+ | | \----- maker-scaffold02959-augustus-gene-0.14-mRNA-1/11-135 (45) | | | | /----- maker-scaffold01061-augustus-gene-0.30-mRNA-1/8-128 (5) | | /-76-+ | | | \----- maker-scaffold04069-snap-gene-0.18-mRNA-1/8-116 (92) | | /----100---+ | | | \---------- maker-scaffold02784-augustus-gene-0.30-mRNA-1/13-131 (15) | | | | | /----51---+ /--------------- maker-scaffold02433-augustus-gene-0.7-mRNA-1/14-139 (11) | | | | | | | | | | /----- maker-scaffold00983-snap-gene-0.43-mRNA-1/2-98 (75) | | | \--52-+ /-79-+ | | | | | \----- maker-scaffold00002-augustus-gene-1.34-mRNA-1/7-131 (83) | | | \-99-+ | | | \---------- maker-scaffold00830-augustus-gene-0.42-mRNA-1/7-131 (85) | | | | | | /----- snap_masked-scaffold08253-abinit-gene-0.10-mRNA-1/50-108 (10) | | | | | | | /-59-+----- snap_masked-scaffold08253-abinit-gene-0.10-mRNA-1/11-53 (62) | |-59-+ | | | | | | \----- snap_masked-scaffold12800-abinit-gene-0.4-mRNA-1/16-94 (88) | | | /-57-+ | | | | |---------- maker-scaffold05469-snap-gene-0.9-mRNA-1/60-116 (49) | | | | | | | | /--80-+ \---------- maker-scaffold05469-snap-gene-0.9-mRNA-1/12-59 (93) | | | | | | | | /-80-+ \--------------- maker-scaffold02824-augustus-gene-0.20-mRNA-1/9-134 (81) | | | | | | | | | \--------------------- maker-scaffold00890-augustus-gene-0.33-mRNA-1/8-143 (76) | | \-72-+ | | | /----- maker-scaffold16464-augustus-gene-0.2-mRNA-1/15-142 (25) | | \---------72---------+ | | \----- maker-scaffold02306-augustus-gene-0.21-mRNA-1/12-139 (87) | | | | /----- maker-scaffold23714-snap-gene-0.3-mRNA-1/69-204 (9) | | /----72---+ | /-55-+ | \----- maker-scaffold09059-snap-gene-0.18-mRNA-1/55-194 (94) | | | | | | | | /----- maker-scaffold06646-augustus-gene-0.12-mRNA-1/14-96 (50) | | |---------100--------+ | | | | | /-94-+----- augustus_masked-scaffold01826-abinit-gene-0.0-mRNA-1/48-188 (57) | | | | | | | | | \-94-+ \----- maker-scaffold22384-snap-gene-0.5-mRNA-1/62-116 (90) | | | | | | | \---------- maker-scaffold03973-snap-gene-0.12-mRNA-1/46-188 (91) | | | | | |------------------------------------ maker-scaffold09973-snap-gene-0.11-mRNA-1/181-306 (12) | | | | | | /--------------- maker-scaffold09786-augustus-gene-0.7-mRNA-1/6-133 (14) | | | | | | | | /----- maker-scaffold03016-augustus-gene-0.16-mRNA-1/6-133 (34) + | |---------93---------+ /-100+ | | | | | \----- maker-scaffold13838-snap-gene-0.5-mRNA-1/6-153 (96) | | | \-99-+ | | | \---------- maker-scaffold00005-augustus-gene-0.28-mRNA-1/6-133 (61) | | | | | | /---------- augustus_masked-scaffold00498-abinit-gene-0.4-mRNA-1/20-146 (17) | | | | | | | /-80-+ /----- maker-scaffold00860-augustus-gene-0.36-mRNA-1/16-146 (67) | | | | \-100+ | | | /-100-+ \----- maker-scaffold04103-augustus-gene-0.16-mRNA-1/19-149 (79) | | | | | | | | /-59-+ \--------------- maker-scaffold02751-augustus-gene-0.20-mRNA-1/20-148 (55) | | | | | | | | /-100+ \--------------------- augustus_masked-scaffold00033-abinit-gene-2.0-mRNA-1/15-142 (24) | | | | | | | | | \-------------------------- augustus_masked-scaffold10669-abinit-gene-0.0-mRNA-1/15-141 (28) | | |-85-+ | | | | /---------- maker-scaffold02051-augustus-gene-0.10-mRNA-1/17-143 (23) | | | | | | | | \---------95---------+ /----- maker-scaffold14402-augustus-gene-0.4-mRNA-1/4-135 (27) | | | \-100+ | | | \----- maker-scaffold08043-augustus-gene-0.8-mRNA-1/5-138 (58) | | | | | | /--------------- augustus_masked-scaffold04550-abinit-gene-0.6-mRNA-1/77-201 (19) | | | | | | | | /----- maker-scaffold09973-snap-gene-0.10-mRNA-1/60-185 (22) | | | | /-87-+ | /-83-+ | | | \----- maker-scaffold04550-snap-gene-0.24-mRNA-1/125-252 (35) | | | | |-86-+ | | | |---------59---------+ \---------- maker-scaffold04550-snap-gene-0.25-mRNA-1/108-234 (43) | | | | | | | | | | /----- maker-scaffold14907-augustus-gene-0.3-mRNA-1/250-375 (29) | | | | |---100---+ | | | | | \----- maker-scaffold14907-augustus-gene-0.3-mRNA-1/58-184 (41) | | | | | | | | | \--------------- maker-scaffold04550-snap-gene-0.24-mRNA-1/343-469 (36) | | | | | | | | /---------- maker-scaffold03547-augustus-gene-0.16-mRNA-1/15-137 (20) | | | | | | | | |------------58-----------+ /----- maker-scaffold06450-augustus-gene-0.17-mRNA-1/14-138 (54) | | | | \-78-+ | | | | \----- augustus_masked-scaffold13692-abinit-gene-0.0-mRNA-1/15-60 (69) | | | | | | | |------------------------------------ snap_masked-scaffold08322-abinit-gene-0.9-mRNA-1/29-75 (21) | | | | | | | |------------------------------------ augustus_masked-scaffold00906-abinit-gene-0.7-mRNA-1/15-141 (26) | | | | | | | | /----- maker-scaffold04583-augustus-gene-0.13-mRNA-1/215-352 (33) | | | |--------------100-------------+ | | | | \----- maker-scaffold04583-augustus-gene-0.13-mRNA-1/6-148 (44) | | | | | | | |------------------------------------ maker-scaffold09973-snap-gene-0.11-mRNA-1/387-445 (53) | | | | | | | |------------------------------------ maker-scaffold09973-snap-gene-0.11-mRNA-1/16-82 (64) | /--87-+ | | | | | | |------------------------------------ maker-scaffold02799-augustus-gene-0.20-mRNA-1/54-134 (68) | | | | | | | | | |------------------------------------ maker-scaffold01789-snap-gene-0.35-mRNA-1/19-158 (78) | | | | | | | | | \------------------------------------ maker-scaffold00873-snap-gene-0.35-mRNA-1/9-84 (95) | | | | | | | | /----- maker-scaffold04312-snap-gene-0.20-mRNA-1/9-136 (30) | | | | /-----------100-----------+ | | | | | \----- maker-scaffold04312-snap-gene-0.21-mRNA-1/9-136 (71) | | | | | | | | | | /----- maker-scaffold07067-augustus-gene-0.6-mRNA-1/9-172 (47) | | | | | /-56-+ | | | | | | \----- maker-scaffold13586-augustus-gene-0.8-mRNA-1/9-150 (65) | | | | | /-100+ | /-88-+ | \---100---+ | \---------- maker-scaffold16081-augustus-gene-0.6-mRNA-1/9-150 (80) | | | | | /-100-+ | | | | | | | /----- maker-scaffold10692-snap-gene-0.12-mRNA-1/9-150 (66) | | | | | | \----99---+ | | | | | /-100+ \----- maker-scaffold07067-augustus-gene-0.6-mRNA-1/545-686 (77) | | | | | | | | | | | | | \--------------------- maker-scaffold17927-snap-gene-0.8-mRNA-1/8-149 (86) | | | | \-85-+ | /-100+ | | | /----- maker-scaffold05403-augustus-gene-0.18-mRNA-1/47-172 (51) | | | | | \---------99---------+ | | | | | \----- maker-scaffold08297-augustus-gene-0.5-mRNA-1/8-164 (52) | | | | | | | | | \---------------------------------------------- maker-scaffold07459-snap-gene-0.9-mRNA-1/11-137 (42) | | | | | | | \---------------------------------------------------- maker-scaffold03703-augustus-gene-0.17-mRNA-1/11-143 (7) |-100+ | | | \--------------------------------------------------------- maker-scaffold08188-augustus-gene-0.7-mRNA-1/9-137 (60) | | | | /----- maker-scaffold08137-snap-gene-0.8-mRNA-1/462-574 (6) | | /-100+ | | | \----- snap_masked-scaffold08137-abinit-gene-0.4-mRNA-1/15-143 (73) | \------------------------100------------------------+ | \---------- maker-scaffold08137-snap-gene-0.8-mRNA-1/15-145 (56) | | /----- maker-scaffold01636-snap-gene-0.46-mRNA-1/10-164 (39) \------------------------------51-----------------------------+ \----- snap_masked-scaffold13705-abinit-gene-0.5-mRNA-1/11-88 (40) |
Phylogenetic tree for protein ? help Back to Top |
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/------------------------------------------------------------------- maker-scaffold06450-augustus-gene-0.17-mRNA-1 (1) | |------------------------------------------------------------------- augustus_masked-scaffold13692-abinit-gene-0.0-mRNA-1 (68) | | /------- maker-scaffold01655-augustus-gene-0.20-mRNA-1 (2) | /--100--+ | | \------- maker-scaffold04981-augustus-gene-0.2-mRNA-1 (48) | /------78------+ | | \--------------- maker-scaffold04399-augustus-gene-0.11-mRNA-1 (63) | | | | /------- augustus_masked-scaffold12148-abinit-gene-0.2-mRNA-1 (25) | /--55--+ /---84--+ | | | | \------- maker-scaffold00345-augustus-gene-0.38-mRNA-1 (77) | | | /--58--+ | | | | \--------------- augustus_masked-scaffold02867-abinit-gene-0.1-mRNA-1 (61) | | \---64--+ | /------56------+ \---------------------- maker-scaffold01684-snap-gene-0.33-mRNA-1 (34) | | | | | |------------------------------------- maker-scaffold02799-augustus-gene-0.20-mRNA-1 (10) | | | | | | /------- maker-scaffold02959-augustus-gene-0.14-mRNA-1 (19) | | \--------------99-------------+ | | \------- augustus_masked-scaffold00534-abinit-gene-0.10-mRNA-1 (79) | | | | /------- maker-scaffold14402-augustus-gene-0.4-mRNA-1 (3) | | /--100--+ | | | \------- maker-scaffold08043-augustus-gene-0.8-mRNA-1 (65) | | /----------66---------+ | | | \--------------- maker-scaffold02051-augustus-gene-0.10-mRNA-1 (4) | | | | | | /--------------- augustus_masked-scaffold00498-abinit-gene-0.4-mRNA-1 (6) | | | | | |------53------+ /--91--+ /------- maker-scaffold00860-augustus-gene-0.36-mRNA-1 (57) | | | | \--100--+ | | | /--100--+ \------- maker-scaffold04103-augustus-gene-0.16-mRNA-1 (70) | | | | | | | | | \---------------------- maker-scaffold02751-augustus-gene-0.20-mRNA-1 (16) | | \--100-+ | | | /------- augustus_masked-scaffold00033-abinit-gene-2.0-mRNA-1 (31) | | \----------100---------+ | | \------- augustus_masked-scaffold10669-abinit-gene-0.0-mRNA-1 (42) | | | |---------------------------------------------------- maker-scaffold01789-snap-gene-0.35-mRNA-1 (5) | | | | /--------------- maker-scaffold04550-snap-gene-0.25-mRNA-1 (7) | | | | |-----------------92-----------------+ /------- maker-scaffold04550-snap-gene-0.24-mRNA-1 (9) | | \---57--+ | | \------- maker-scaffold09973-snap-gene-0.10-mRNA-1 (51) | | | | /--------------- maker-scaffold02829-snap-gene-0.27-mRNA-1 (8) | | | | |-----------------55-----------------+ /------- maker-scaffold12065-snap-gene-0.6-mRNA-1 (50) | | \--100--+ | | \------- maker-scaffold15610-augustus-gene-0.4-mRNA-1 (52) | | | | /---------------------- maker-scaffold03973-snap-gene-0.12-mRNA-1 (11) | | | | | /---87--+ /--------------- maker-scaffold06646-augustus-gene-0.12-mRNA-1 (26) | | | | | | | | \--92--+ /------- maker-scaffold22384-snap-gene-0.5-mRNA-1 (67) | | | \---80--+ | |---------100---------+ \------- augustus_masked-scaffold01826-abinit-gene-0.0-mRNA-1 (72) | | | | | | /------- maker-scaffold23714-snap-gene-0.3-mRNA-1 (22) | | \----------99----------+ | | \------- maker-scaffold09059-snap-gene-0.18-mRNA-1 (84) + | | | /------- maker-scaffold08573-augustus-gene-0.8-mRNA-1 (12) | |---------------------100--------------------+ | | \------- augustus_masked-scaffold03666-abinit-gene-0.5-mRNA-1 (39) | | | | /------- maker-scaffold00005-augustus-gene-0.28-mRNA-1 (13) | | /---68--+ | | | \------- maker-scaffold13838-snap-gene-0.5-mRNA-1 (27) | |-----------------91-----------------+ | | \--------------- maker-scaffold03016-augustus-gene-0.16-mRNA-1 (17) | | | | /------- snap_masked-scaffold13705-abinit-gene-0.5-mRNA-1 (15) | | | | | /---99--+------- maker-scaffold01636-snap-gene-0.46-mRNA-1 (46) | | | | | | | \------- maker-scaffold09484-snap-gene-0.17-mRNA-1 (55) | | /--99--+ | | | | /------- snap_masked-scaffold08137-abinit-gene-0.4-mRNA-1 (53) | | | \--100--+ | | | \------- maker-scaffold08137-snap-gene-0.8-mRNA-1 (81) | |--------------70-------------+ | | | /------- maker-scaffold07459-snap-gene-0.9-mRNA-1 (35) | | | /---84--+ | | | | \------- maker-scaffold03703-augustus-gene-0.17-mRNA-1 (82) | | \--74--+ | | \--------------- maker-scaffold08188-augustus-gene-0.7-mRNA-1 (78) | /---86--+ | | |---------------------------------------------------- maker-scaffold09973-snap-gene-0.11-mRNA-1 (18) | | | | | | /------- maker-scaffold02784-augustus-gene-0.30-mRNA-1 (20) | | | /---56--+ | | | | \------- maker-scaffold04069-snap-gene-0.18-mRNA-1 (76) | | |-----------------100----------------+ | | | \--------------- maker-scaffold01061-augustus-gene-0.30-mRNA-1 (60) | | | | | | /------- maker-scaffold00018-augustus-gene-0.30-mRNA-1 (21) | | | /--100--+ | | | | \------- maker-scaffold04107-augustus-gene-0.9-mRNA-1 (37) | | | /--64--+ | | | | \--------------- maker-scaffold08294-augustus-gene-0.4-mRNA-1 (30) | | | /--100--+ | | | | \---------------------- augustus_masked-scaffold02790-abinit-gene-0.8-mRNA-1 (24) | | | | | | | | /--------------- maker-scaffold00745-snap-gene-0.42-mRNA-1 (45) | | |---------100---------+ | | | | | /--87--+ /------- maker-scaffold03032-augustus-gene-0.24-mRNA-1 (80) | | | | | \--100--+ | | | \---99--+ \------- maker-scaffold02656-augustus-gene-0.15-mRNA-1 (86) | | | | | | | \---------------------- maker-scaffold00057-snap-gene-0.53-mRNA-1 (71) | | | | | | /------- maker-scaffold16464-augustus-gene-0.2-mRNA-1 (23) | | | /----------95----------+ | | | | \------- maker-scaffold02306-augustus-gene-0.21-mRNA-1 (87) | | | | | | |----------91---------+ /---------------------- maker-scaffold00890-augustus-gene-0.33-mRNA-1 (47) | | | | | | | | \---95--+ /--------------- maker-scaffold02824-augustus-gene-0.20-mRNA-1 (56) | | | | | | | | \--96--+ /------- snap_masked-scaffold08253-abinit-gene-0.10-mRNA-1 (66) | | | \--100--+ | | | \------- snap_masked-scaffold12800-abinit-gene-0.4-mRNA-1 (85) | | | | | | /------- maker-scaffold05403-augustus-gene-0.18-mRNA-1 (28) | | | /-------------100-------------+ | | | | \------- maker-scaffold08297-augustus-gene-0.5-mRNA-1 (62) \--82--+ | | | | | /------- maker-scaffold13586-augustus-gene-0.8-mRNA-1 (29) | | | /--100--+ | | /---66--+ | \------- maker-scaffold07067-augustus-gene-0.6-mRNA-1 (38) | | | | /--100-+ | | | | | \--------------- maker-scaffold16081-augustus-gene-0.6-mRNA-1 (41) | | | | /--100--+ | | | | | \---------------------- maker-scaffold10692-snap-gene-0.12-mRNA-1 (40) | |--100-+ \--100-+ | | | \------------------------------ maker-scaffold17927-snap-gene-0.8-mRNA-1 (49) | | | | | | /------- maker-scaffold04312-snap-gene-0.21-mRNA-1 (32) | | \-----------------100-----------------+ | | \------- maker-scaffold04312-snap-gene-0.20-mRNA-1 (74) | | | | /------- maker-scaffold00983-snap-gene-0.43-mRNA-1 (33) | | /---98--+ | | | \------- maker-scaffold00002-augustus-gene-1.34-mRNA-1 (75) | |-----------------100----------------+ | | \--------------- maker-scaffold00830-augustus-gene-0.42-mRNA-1 (36) | | | |---------------------------------------------------- augustus_masked-scaffold00906-abinit-gene-0.7-mRNA-1 (43) | | | |---------------------------------------------------- maker-scaffold02433-augustus-gene-0.7-mRNA-1 (44) | | | |---------------------------------------------------- maker-scaffold00873-snap-gene-0.35-mRNA-1 (54) | | | |---------------------------------------------------- augustus_masked-scaffold04550-abinit-gene-0.6-mRNA-1 (58) | | | |---------------------------------------------------- snap_masked-scaffold08322-abinit-gene-0.9-mRNA-1 (59) | | | |---------------------------------------------------- maker-scaffold04583-augustus-gene-0.13-mRNA-1 (64) | | | |---------------------------------------------------- maker-scaffold09786-augustus-gene-0.7-mRNA-1 (69) | | | |---------------------------------------------------- maker-scaffold05469-snap-gene-0.9-mRNA-1 (73) | | | \---------------------------------------------------- maker-scaffold14907-augustus-gene-0.3-mRNA-1 (83) | \------------------------------------------------------------ maker-scaffold03547-augustus-gene-0.16-mRNA-1 (14) |