PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Arabidopsis thaliana
M-type_MADS FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------- AT2G24840.1/72-114 (1) | | /------- AT3G66656.1/11-57 (8) |----------------------------100----------------------------+ | \------- AT2G34440.1/12-57 (36) | | /------- AT1G72350.1/53-98 (39) |----------------------------100----------------------------+ | \------- AT1G17310.1/55-103 (62) | | /------- AT1G60920.1/11-49 (5) | /------85------+ | | \------- AT1G60880.1/11-49 (61) | | | | /------- AT5G49420.1/22-53 (10) | | /---57--+ | | | \------- AT5G49490.1/60-92 (29) | |--100-+ | | \--------------- AT5G38620.1/20-51 (26) |---------------------99---------------------+ | | /------- AT1G48150.1/28-66 (30) | |------100-----+ | | \------- AT5G27130.1/23-63 (41) | | | |---------------------- AT1G46408.1/12-49 (33) | | | \---------------------- AT5G04640.1/12-49 (42) | | /--------------- AT2G40210.1/11-51 (2) | | | /--------------88-------------+ /------- AT5G06500.1/11-59 (21) | | \---63--+ | | \------- AT2G28700.1/11-50 (49) | | | | /------- AT1G33070.1/4-24 (4) | | /---99--+ | | | \------- AT1G31640.1/13-50 (46) | | /--100-+ | | | \--------------- AT1G31630.1/10-51 (7) | | | | /--50--+ /---82--+ /------- AT5G26650.1/9-48 (17) | | | | | /---91--+ | | | | | | \------- AT5G27960.1/9-48 (35) | | | | \--99--+ | | | | \--------------- AT5G26580.1/11-50 (48) | | | /--50--+ | | | | | /------- AT5G48670.1/11-51 (12) | | | | | /---76--+ | | | | | | \------- AT5G27810.1/1-28 (37) | /---85--+ | | | | | | | \---72--+ \------65------+--------------- AT1G22590.2/11-50 (19) | | | | | | | | | \--------------- AT3G05860.1/11-50 (27) | | | | | | | | /------- AT1G65330.1/9-55 (18) | | | \-------------100-------------+ | | | \------- AT1G65300.1/10-53 (65) | | | | | \---------------------------------------------------- AT5G26630.1/10-50 (40) | | | | /--------------- AT5G65330.1/5-54 (15) + | | | | /--100-+ /------- AT4G02235.1/7-56 (24) | | | \---82--+ | | | \------- AT4G11250.1/5-53 (60) | | | | | | /------- AT5G40220.1/10-58 (16) | | | | | | | |------- AT5G41200.1/10-59 (23) | | /---75--+ | | | | | |------- AT5G40120.1/9-58 (34) | | | | /---81--+ | | | | | |------- AT5G39750.1/17-65 (51) | | | | | | | | | | | |------- AT5G39810.1/17-65 (55) |--99--+ | \--100-+ | | | | | \------- AT5G38740.1/18-67 (59) | | | | | | /--93--+ \--------------- AT5G37415.1/85-111 (38) | | | | | | | | /------- AT5G27944.1/27-76 (20) | | | | /------95------+ | | | | | \------- AT5G26880.1/241-279 (52) | | | | | | | | | | /------- AT5G27070.1/27-76 (22) | | | | | /---99--+ | | /--100--+ | | | \------- AT5G26950.1/27-76 (63) | | | | \--100--+--67--+ | | | | | \--------------- AT5G27090.1/27-75 (66) | | | | | | | | | |---------------------- AT5G27580.1/27-76 (53) | | | | | | |------80------+ | \---------------------- AT5G27050.1/1-32 (54) | | | | | | | \------------------------------------- AT3G18650.1/29-73 (50) | | | | | | /------- AT1G59810.1/22-62 (44) | | \-----------------100-----------------+ | | \------- AT1G60040.1/23-63 (64) | | | | /------- AT5G55690.1/10-51 (47) | \-------------------------100------------------------+ | \------- AT5G58890.1/10-51 (56) | | /------- AT5G60440.1/16-62 (6) | /---79--+ | | \------- AT4G36590.1/14-62 (45) | | |-------------------------84------------------------+--------------- AT1G65360.1/19-62 (14) | | | \--------------- AT1G01530.1/17-62 (28) | | /------------------------------------- AT2G26320.1/25-69 (3) | | | | /------- AT1G18750.1/9-54 (9) | | /---86--+ | | | \------- AT1G69540.1/11-53 (32) | |---------100---------+ | | \--------------- AT2G03060.2/10-53 (25) | | | | /------------------------------ AT3G04100.1/21-70 (11) \--------------57-------------+ | | | /---------------------- AT1G54760.1/19-44 (31) |--70--+ | | | | /------- AT1G28450.1/15-64 (43) | \--100--+ /---92--+ | | | \------- AT1G28460.1/15-64 (58) | \--52--+ | \--------------- AT1G29962.1/15-64 (57) | \------------------------------------- AT1G47760.1/9-57 (13) |
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 119: /--------------- AT2G26320.1 (2) | | /----- AT1G69540.1 (5) /---------87---------+ /-100+ | | | \----- AT2G03060.2 (20) | \-100+ | \---------- AT1G18750.1 (56) | | /----- AT1G60880.1 (3) | /------100------+ | | \----- AT1G60920.1 (44) | | | | /----- AT5G49420.1 (12) | /-100+ /-79-+ | | | | \----- AT5G38620.1 (57) | | | /-100+ | | | | \---------- AT5G49490.1 (48) | | \--59-+ | /-100+ | /----- AT1G46408.1 (26) | | | \----90---+ /---100---+ | | \----- AT5G04640.1 (50) | | | | | | | | /----- AT1G48150.1 (8) | | | \---------100--------+ | | | \----- AT5G27130.1 (16) | | | | | | /----- AT1G28450.1 (7) | | | /-72-+ | | | | \----- AT1G28460.1 (10) | | | /-100+ | | | | | /----- AT1G54760.1 (33) | | | | \-99-+ | | |------100------+ \----- AT1G29962.1 (36) | | | | | | | \--------------- AT3G04100.1 (39) | | | | \-99-+ /--------------------- AT2G24840.1 (22) | | | | | | /----- AT1G65360.1 (40) | | | /-100+ | | /-95-+ | \----- AT1G01530.1 (60) | | | | /-59-+ | | | | | \---------- AT5G60440.1 (65) | | | \-100-+ | |-51-+ \--------------- AT4G36590.1 (49) | | | | | | /----- AT1G17310.1 (27) | | \---------100--------+ | | \----- AT1G72350.1 (63) | | | | /----- AT3G66656.1 (52) | |-----------100-----------+ | | \----- AT2G34440.1 (59) /--99-+ | | | \------------------------------- AT1G47760.1 (62) | | | | /----- AT2G28700.1 (11) | | /---100---+ | | | \----- AT3G05860.1 (32) | | | | | /----70----+ /---------- AT5G26630.1 (17) | | | | | | | | \-52-+ /----- AT5G27810.1 (35) | | | \-100+ | | | \----- AT5G48670.1 (53) | | | | | | /----- AT5G27960.1 (23) | | | /-95-+ | | /-96-+ | \----- AT5G26650.1 (46) | | | | /-100+ | | | | | \---------- AT5G26580.1 (31) | | | | | | | | | /--99-+ /---------- AT1G31640.1 (29) /-100+ | | | | | | | | | | | | \-100+ /----- AT1G33070.1 (38) | | | | | | \-100+ | | | /-72-+ \-95-+ \----- AT1G31630.1 (64) | | | | | | | | | | | | /----- AT1G65300.1 (54) | | | | | \------100------+ | | | | | \----- AT1G65330.1 (58) | | | /-64-+ | | | | | | | /----- AT5G06500.1 (41) | | | | | \-----------100-----------+ | | | | | \----- AT2G40210.1 (66) | | \-77-+ | | | | \------------------------------------ AT1G22590.2 (51) | | | | | | /----- AT5G58890.1 (13) | | \----------------100----------------+ /-78-+ | \----- AT5G55690.1 (34) | | | | | | /----- AT1G60040.1 (4) | | \----------------------100---------------------+ | | \----- AT1G59810.1 (55) | | | | /--------------- AT5G27944.1 (9) | | | | | | /----- AT5G27070.1 (14) | | /--98-+ /-100+ | | | | | \----- AT5G26950.1 (43) | | | \-91-+ --100+ | /-63-+ \---------- AT5G27090.1 (61) | | | | | | /-82-+ \--------------------- AT5G27580.1 (15) | | | | | \-----------100-----------+ \-------------------------- AT5G26880.1 (47) | | | \------------------------------- AT5G27050.1 (28) | |-------------------------------------------------------------- AT3G18650.1 (6) | | /---------- AT4G02235.1 (19) | | \------------------------100------------------------+ /----- AT5G65330.1 (21) \-95-+ \----- AT4G11250.1 (45) Root part of tree: /------------------------------------------------------------------- AT5G40220.1 (1) | |------------------------------------------------------------------- AT5G41200.1 (25) | | /--------------------------------- (119) | | + | /----------- AT5G39750.1 (30) | /-----95----+ /----68----+ | | | | \----------- AT5G39810.1 (37) | | \----100---+ | /----100---+ \---------------------- AT5G37415.1 (42) | | | \----100---+ \--------------------------------------------- AT5G38740.1 (24) | \-------------------------------------------------------- AT5G40120.1 (18) |