PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for
Castanea mollissima
LBD Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- augustus_masked-scaffold08738-abinit-gene-0.0-mRNA-1/8-107   (1)
      |                                                                               
      |------------------------------------------------------------------- maker-scaffold18635-augustus-gene-0.2-mRNA-1/6-105           (40)
      |                                                                               
      |                                                   /--------------- augustus_masked-scaffold19545-abinit-gene-0.0-mRNA-1/8-107   (2)
      |                                                   |                           
      |                                            /--97--+       /------- augustus_masked-scaffold04045-abinit-gene-0.0-mRNA-1/21-99   (3)
      |                                            |      \---99--+                   
      |                                            |              \------- augustus_masked-scaffold00880-abinit-gene-0.0-mRNA-1/7-106   (24)
      |                                    /---82--+                                  
      |                                    |       |              /------- augustus_masked-scaffold09214-abinit-gene-0.1-mRNA-1/10-108  (4)
      |                                    |       \------100-----+                   
      |                             /--70--+                      \------- augustus_masked-scaffold01668-abinit-gene-0.6-mRNA-1/2-87    (14)
      |                             |      |                                          
      |                             |      \------------------------------ augustus_masked-scaffold00491-abinit-gene-0.11-mRNA-1/11-110 (35)
      |                             |                                                 
      |                             |                             /------- maker-scaffold01537-augustus-gene-0.26-mRNA-1/12-60          (5)
      |                             |--------------91-------------+                   
      |                             |                             \------- maker-scaffold01927-augustus-gene-0.11-mRNA-1/13-112         (36)
      |                             |                                                 
      |                             |                             /------- maker-scaffold07673-augustus-gene-0.9-mRNA-1/18-117          (6)
      |                             |-------------100-------------+                   
      |                             |                             \------- snap_masked-scaffold14478-abinit-gene-0.2-mRNA-1/42-141      (22)
      |                             |                                                 
      |                             |                             /------- augustus_masked-scaffold00060-abinit-gene-1.16-mRNA-1/14-113 (7)
      |                             |                     /---55--+                   
      |                             |                     |       \------- snap_masked-scaffold26818-abinit-gene-0.1-mRNA-1/10-109      (8)
      |                             |              /--62--+                           
      |                             |              |      |       /------- augustus_masked-scaffold15282-abinit-gene-0.2-mRNA-1/14-113  (9)
      |                             |              |      \--100--+                   
      |                             |              |              \------- augustus_masked-scaffold03750-abinit-gene-0.2-mRNA-1/23-122  (19)
      |                             |      /---80--+                                  
      |                             |      |       |              /------- augustus_masked-scaffold13176-abinit-gene-0.0-mRNA-1/8-103   (26)
      |                             |      |       |              |                   
      |                             |      |       \------60------+------- maker-scaffold02688-augustus-gene-0.23-mRNA-1/10-110         (32)
      |                             |--61--+                      |                   
      |                             |      |                      \------- augustus_masked-scaffold14956-abinit-gene-0.1-mRNA-1/16-65   (33)
      |                             |      |                                          
      |                             |      \------------------------------ maker-scaffold11791-augustus-gene-0.2-mRNA-1/14-111          (34)
      +                             |                                                 
      |                             |                             /------- maker-scaffold01438-augustus-gene-0.24-mRNA-1/4-107          (10)
      |                             |              /------99------+                   
      |                     /--100--+              |              \------- augustus_masked-scaffold01213-abinit-gene-0.9-mRNA-1/4-105   (16)
      |                     |       |              |                                  
      |                     |       |------100-----+              /------- maker-scaffold01188-augustus-gene-0.31-mRNA-1/2-103          (21)
      |                     |       |              |      /---51--+                   
      |                     |       |              |      |       \------- maker-scaffold01628-snap-gene-0.30-mRNA-1/35-136             (38)
      |                     |       |              \--72--+                           
      |                     |       |                     \--------------- maker-scaffold00779-augustus-gene-0.29-mRNA-1/2-117          (37)
      |                     |       |                                                 
      |                     |       |      /------------------------------ maker-scaffold00535-augustus-gene-0.30-mRNA-1/7-98           (12)
      |                     |       |      |                                          
      |                     |       |      |                      /------- maker-scaffold12796-snap-gene-0.5-mRNA-1/32-131              (17)
      |                     |       |      |              /---94--+                   
      |                     |       |      |              |       \------- maker-scaffold00879-augustus-gene-0.47-mRNA-1/7-106          (30)
      |                     |       |--100-+       /--100-+                           
      |                     |       |      |       |      \--------------- maker-scaffold03453-snap-gene-0.17-mRNA-1/33-132             (43)
      |                     |       |      |       |                                  
      |                     |       |      |       |---------------------- maker-scaffold03453-snap-gene-0.16-mRNA-1/20-107             (18)
      |                     |       |      \---57--+                                  
      |              /--100-+       |              |      /--------------- maker-scaffold02148-augustus-gene-0.31-mRNA-1/37-138         (20)
      |              |      |       |              |      |                           
      |              |      |       |              \--86--+       /------- maker-scaffold03480-snap-gene-0.20-mRNA-1/10-110             (23)
      |              |      |       |                     \---95--+                   
      |              |      |       |                             \------- maker-scaffold04662-augustus-gene-0.23-mRNA-1/29-129         (39)
      |              |      |       |                                                 
      |              |      |       |                             /------- maker-scaffold00987-augustus-gene-0.34-mRNA-1/41-140         (13)
      |              |      |       |--------------92-------------+                   
      |              |      |       |                             \------- maker-scaffold00419-augustus-gene-0.36-mRNA-1/70-169         (28)
      |              |      |       |                                                 
      |              |      |       |                             /------- augustus_masked-scaffold14943-abinit-gene-0.0-mRNA-1/13-52   (25)
      |      /---76--+      |       |                             |                   
      |      |       |      |       \--------------77-------------+------- maker-scaffold02428-augustus-gene-0.19-mRNA-1/6-105          (29)
      |      |       |      |                                     |                   
      |      |       |      |                                     \------- maker-scaffold01193-augustus-gene-0.35-mRNA-1/6-105          (42)
      |      |       |      |                                                         
      |      |       |      |                                     /------- augustus_masked-scaffold00910-abinit-gene-0.9-mRNA-1/5-104   (15)
      |      |       |      \-----------------100-----------------+                   
      \--66--+       |                                            \------- augustus_masked-scaffold05732-abinit-gene-0.0-mRNA-1/5-104   (31)
             |       |                                                                
             |       |                                            /------- maker-scaffold02294-augustus-gene-0.23-mRNA-1/6-106          (11)
             |       \---------------------52---------------------+                   
             |                                                    \------- augustus_masked-scaffold02294-abinit-gene-0.5-mRNA-1/3-50    (41)
             |                                                                        
             |                                                    /------- maker-scaffold06382-augustus-gene-0.13-mRNA-1/6-105          (27)
             \-------------------------98-------------------------+                   
                                                                  \------- maker-scaffold23274-augustus-gene-0.3-mRNA-1/6-105           (44)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- augustus_masked-scaffold08738-abinit-gene-0.0-mRNA-1  (1)
      |                                                                               
      |------------------------------------------------------------------- maker-scaffold23274-augustus-gene-0.3-mRNA-1          (34)
      |                                                                               
      |                                                            /------ maker-scaffold02294-augustus-gene-0.23-mRNA-1         (11)
      |-----------------------------70-----------------------------+                  
      |                                                            \------ augustus_masked-scaffold02294-abinit-gene-0.5-mRNA-1  (38)
      |                                                                               
      |                                                            /------ maker-scaffold07673-augustus-gene-0.9-mRNA-1          (2)
      |                                    /----------100----------+                  
      |                                    |                       \------ snap_masked-scaffold14478-abinit-gene-0.2-mRNA-1      (5)
      |                                    |                                          
      |                                    |                 /------------ augustus_masked-scaffold14943-abinit-gene-0.0-mRNA-1  (7)
      |                                    |                 |                        
      |                                    |           /--91-+     /------ maker-scaffold02428-augustus-gene-0.19-mRNA-1         (15)
      |                             /--86--+           |     \--92-+                  
      |                             |      |           |           \------ maker-scaffold01193-augustus-gene-0.35-mRNA-1         (37)
      |                             |      |     /--90-+                              
      |                             |      |     |     |           /------ maker-scaffold01537-augustus-gene-0.26-mRNA-1         (32)
      |                             |      |     |     \----100----+                  
      |                             |      |     |                 \------ maker-scaffold01927-augustus-gene-0.11-mRNA-1         (39)
      |                             |      \--87-+                                    
      |                             |            |                 /------ maker-scaffold00987-augustus-gene-0.34-mRNA-1         (21)
      |                             |            |           /-100-+                  
      |                             |            |           |     \------ maker-scaffold00419-augustus-gene-0.36-mRNA-1         (22)
      |                             |            \----100----+                        
      |                             |                        \------------ maker-scaffold11791-augustus-gene-0.2-mRNA-1          (29)
      |                             |                                                 
      |                       /--80-+                              /------ augustus_masked-scaffold09214-abinit-gene-0.1-mRNA-1  (3)
      |                       |     |                  /----100----+                  
      |                       |     |                  |           \------ augustus_masked-scaffold01668-abinit-gene-0.6-mRNA-1  (23)
      |                       |     |                  |                              
      |                       |     |                  |------------------ augustus_masked-scaffold00491-abinit-gene-0.11-mRNA-1 (12)
      |                       |     |            /--99-+                              
      |                       |     |            |     |           /------ augustus_masked-scaffold04045-abinit-gene-0.0-mRNA-1  (25)
      |                       |     |            |     |     /--99-+                  
      |                       |     |            |     |     |     \------ augustus_masked-scaffold00880-abinit-gene-0.0-mRNA-1  (40)
      |                       |     |            |     \-100-+                        
      |                       |     |            |           \------------ augustus_masked-scaffold19545-abinit-gene-0.0-mRNA-1  (41)
      |                       |     |            |                                    
      +                       |     \-----80-----+     /------------------ maker-scaffold00535-augustus-gene-0.30-mRNA-1         (4)
      |                       |                  |     |                              
      |                       |                  |     |           /------ maker-scaffold00879-augustus-gene-0.47-mRNA-1         (9)
      |                       |                  |     |     /--99-+                  
      |                       |                  |     |     |     \------ maker-scaffold12796-snap-gene-0.5-mRNA-1              (28)
      |                       |                  |     |-100-+                        
      |                       |                  |     |     \------------ maker-scaffold03453-snap-gene-0.17-mRNA-1             (24)
      |                       |                  \-100-+                              
      |                       |                        |           /------ maker-scaffold04662-augustus-gene-0.23-mRNA-1         (17)
      |                       |                        |----100----+                  
      |                       |                        |           \------ maker-scaffold03480-snap-gene-0.20-mRNA-1             (44)
      |                 /--78-+                        |                              
      |                 |     |                        |------------------ maker-scaffold03453-snap-gene-0.16-mRNA-1             (27)
      |                 |     |                        |                              
      |                 |     |                        \------------------ maker-scaffold02148-augustus-gene-0.31-mRNA-1         (43)
      |                 |     |                                                       
      |                 |     |                                    /------ maker-scaffold02688-augustus-gene-0.23-mRNA-1         (8)
      |                 |     |                              /--98-+                  
      |                 |     |                              |     \------ augustus_masked-scaffold13176-abinit-gene-0.0-mRNA-1  (26)
      |                 |     |                              |                        
      |                 |     |                              |     /------ snap_masked-scaffold26818-abinit-gene-0.1-mRNA-1      (20)
      |                 |     |--------------97--------------+--57-+                  
      |                 |     |                              |     \------ augustus_masked-scaffold00060-abinit-gene-1.16-mRNA-1 (33)
      |                 |     |                              |                        
      |                 |     |                              |     /------ augustus_masked-scaffold03750-abinit-gene-0.2-mRNA-1  (30)
      |           /--72-+     |                              \--99-+                  
      |           |     |     |                                    \------ augustus_masked-scaffold15282-abinit-gene-0.2-mRNA-1  (35)
      |           |     |     |                                                       
      |           |     |     |                              /------------ maker-scaffold01628-snap-gene-0.30-mRNA-1             (13)
      |           |     |     |                              |                        
      |           |     |     |                        /--89-+     /------ maker-scaffold01188-augustus-gene-0.31-mRNA-1         (16)
      |           |     |     |                        |     \--93-+                  
      |           |     |     |                        |           \------ maker-scaffold00779-augustus-gene-0.29-mRNA-1         (36)
      |           |     |     \-----------100----------+                              
      |     /--63-+     |                              |           /------ maker-scaffold01438-augustus-gene-0.24-mRNA-1         (18)
      |     |     |     |                              \-----95----+                  
      |     |     |     |                                          \------ augustus_masked-scaffold01213-abinit-gene-0.9-mRNA-1  (42)
      |     |     |     |                                                             
      |     |     |     |                                          /------ augustus_masked-scaffold05732-abinit-gene-0.0-mRNA-1  (14)
      |     |     |     \--------------------100-------------------+                  
      \--56-+     |                                                \------ augustus_masked-scaffold00910-abinit-gene-0.9-mRNA-1  (19)
            |     |                                                                   
            |     \------------------------------------------------------- augustus_masked-scaffold14956-abinit-gene-0.1-mRNA-1  (31)
            |                                                                         
            |------------------------------------------------------------- maker-scaffold06382-augustus-gene-0.13-mRNA-1         (6)
            |                                                                         
            \------------------------------------------------------------- maker-scaffold18635-augustus-gene-0.2-mRNA-1          (10)