PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for
Castanea mollissima
HD-ZIP Family
Phylogenetic tree for domain ? help Back to Top

      /------------------------------------------------------------------- maker-scaffold00401-snap-gene-0.14-mRNA-1/57-110             (1)
      |                                                                               
      |------------------------------------------------------------------- maker-scaffold02578-augustus-gene-0.27-mRNA-1/54-106         (30)
      |                                                                               
      |                                   /------------------------------- maker-scaffold03027-augustus-gene-0.19-mRNA-1/21-75          (2)
      |                                   |                                           
      |                                   |                         /----- maker-scaffold00643-augustus-gene-0.33-mRNA-1/92-145         (4)
      |                                   |------------56-----------+                 
      |                                   |                         \----- maker-scaffold03543-augustus-gene-0.5-mRNA-1/86-139          (25)
      |                                   |                                           
      |                                   |                         /----- maker-scaffold00828-snap-gene-0.36-mRNA-1/112-167            (7)
      |                                   |                    /-69-+                 
      |                                   |                    |    \----- maker-scaffold01555-augustus-gene-0.23-mRNA-1/69-122         (12)
      |                                   |               /-89-+                      
      |                                   |               |    |    /----- maker-scaffold04853-augustus-gene-0.9-mRNA-1/142-196         (14)
      |         /------------53-----------+               |    \-72-+                 
      |         |                         |         /--78-+         \----- maker-scaffold02926-augustus-gene-0.23-mRNA-1/86-138         (20)
      |         |                         |         |     |                           
      |         |                         |    /-72-+     \--------------- augustus_masked-scaffold00571-abinit-gene-0.8-mRNA-1/181-235 (16)
      |         |                         |    |    |                                 
      |         |                         |-100+    \--------------------- maker-scaffold00261-snap-gene-0.32-mRNA-1/158-217            (23)
      |         |                         |    |                                      
      |         |                         |    \-------------------------- maker-scaffold06976-snap-gene-0.12-mRNA-1/87-141             (8)
      |         |                         |                                           
      +         |                         |------------------------------- snap_masked-scaffold00829-abinit-gene-0.14-mRNA-1/104-157    (13)
      |         |                         |                                           
      |         |                         \------------------------------- maker-scaffold03209-snap-gene-0.21-mRNA-1/30-84              (26)
      |         |                                                                     
      |         |                                                   /----- maker-scaffold01008-snap-gene-0.50-mRNA-1/73-124             (3)
      |         |               /----------------100----------------+                 
      |         |               |                                   \----- maker-scaffold01556-augustus-gene-0.16-mRNA-1/73-124         (15)
      |         |               |                                                     
      |         |               |         /------------------------------- maker-scaffold02811-augustus-gene-0.20-mRNA-1/100-155        (5)
      |         |               |         |                                           
      |    /-66-+               |         |               /--------------- maker-scaffold09435-augustus-gene-0.3-mRNA-1/86-141          (6)
      |    |    |               |         |               |                           
      |    |    |               |         |               |         /----- maker-scaffold07581-snap-gene-0.5-mRNA-1/59-114              (21)
      |    |    |          /-96-+         |         /--71-+    /-65-+                 
      |    |    |          |    |    /-99-+         |     |    |    \----- maker-scaffold05603-snap-gene-0.9-mRNA-1/61-116              (32)
      |    |    |          |    |    |    |         |     \-99-+                      
      |    |    |          |    |    |    |    /-57-+          \---------- maker-scaffold02779-augustus-gene-0.16-mRNA-1/19-74          (27)
      |    |    |          |    |    |    |    |    |                                 
      |    |    |          |    |    |    |    |    |               /----- maker-scaffold00215-augustus-gene-0.33-mRNA-2/89-152         (17)
      |    |    |          |    |    |    \-53-+    \-------97------+                 
      |    |    |          |    |    |         |                    \----- maker-scaffold14381-snap-gene-0.10-mRNA-1/47-102             (22)
      |    |    |          |    \-100+         |                                      
      |    |    |          |         |         \-------------------------- maker-scaffold00005-snap-gene-2.51-mRNA-1/1-39               (29)
      |    |    |    /--96-+         |                                                
      \-72-+    |    |     |         |                              /----- maker-scaffold11527-augustus-gene-0.6-mRNA-1/26-83           (9)
           |    |    |     |         |                         /-80-+                 
           |    |    |     |         |                         |    \----- maker-scaffold06251-augustus-gene-0.5-mRNA-1/5-63            (19)
           |    |    |     |         \-----------100-----------+                      
           |    |    |     |                                   |    /----- maker-scaffold04113-augustus-gene-0.9-mRNA-1/17-75           (11)
           |    \-96-+     |                                   \-51-+                 
           |         |     |                                        \----- maker-scaffold00306-augustus-gene-0.18-mRNA-1/17-75          (31)
           |         |     |                                                          
           |         |     \---------------------------------------------- maker-scaffold01546-augustus-gene-0.28-mRNA-1/35-89          (28)
           |         |                                                                
           |         \---------------------------------------------------- maker-scaffold07217-augustus-gene-0.12-mRNA-1/40-91          (10)
           |                                                                          
           |                                                        /----- maker-scaffold00245-snap-gene-0.26-mRNA-1/78-131             (18)
           \---------------------------100--------------------------+                 
                                                                    \----- maker-scaffold04568-augustus-gene-0.12-mRNA-1/77-129         (24)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- maker-scaffold14381-snap-gene-0.10-mRNA-1            (1)
      |                                                                               
      |------------------------------------------------------------------- maker-scaffold00215-augustus-gene-0.33-mRNA-2        (7)
      |                                                                               
      |                                                            /------ maker-scaffold01555-augustus-gene-0.23-mRNA-1        (2)
      |                                                      /--53-+                  
      |                                                      |     \------ augustus_masked-scaffold00571-abinit-gene-0.8-mRNA-1 (25)
      |                                                      |                        
      |                                                      |------------ maker-scaffold02926-augustus-gene-0.23-mRNA-1        (5)
      |                                                      |                        
      |                       /--------------100-------------+     /------ maker-scaffold06976-snap-gene-0.12-mRNA-1            (19)
      |                       |                              |-100-+                  
      |                       |                              |     \------ maker-scaffold00261-snap-gene-0.32-mRNA-1            (23)
      |                       |                              |                        
      |                       |                              |     /------ maker-scaffold00828-snap-gene-0.36-mRNA-1            (29)
      |                       |                              \--78-+                  
      |                       |                                    \------ maker-scaffold04853-augustus-gene-0.9-mRNA-1         (32)
      |                       |                                                       
      |                       |                                    /------ maker-scaffold00643-augustus-gene-0.33-mRNA-1        (3)
      |                       |                  /-------100-------+                  
      |                       |                  |                 \------ maker-scaffold03543-augustus-gene-0.5-mRNA-1         (30)
      |                       |                  |                                    
      |                       |                  |                 /------ maker-scaffold00245-snap-gene-0.26-mRNA-1            (6)
      |                 /-100-+            /--92-+           /-100-+                  
      |                 |     |            |     |           |     \------ maker-scaffold04568-augustus-gene-0.12-mRNA-1        (21)
      |                 |     |            |     |     /--86-+                        
      |                 |     |            |     |     |     \------------ snap_masked-scaffold00829-abinit-gene-0.14-mRNA-1    (15)
      |                 |     |            |     \--71-+                              
      +                 |     |            |           |           /------ maker-scaffold00401-snap-gene-0.14-mRNA-1            (14)
      |                 |     |            |           \----100----+                  
      |                 |     |     /--93--+                       \------ maker-scaffold02578-augustus-gene-0.27-mRNA-1        (24)
      |                 |     |     |      |                                          
      |                 |     |     |      |                       /------ maker-scaffold01556-augustus-gene-0.16-mRNA-1        (4)
      |                 |     |     |      |                 /-100-+                  
      |                 |     |     |      |                 |     \------ maker-scaffold01008-snap-gene-0.50-mRNA-1            (27)
      |           /-100-+     |     |      |                 |                        
      |           |     |     \--59-+      \-------100-------+------------ maker-scaffold01546-augustus-gene-0.28-mRNA-1        (17)
      |           |     |           |                        |                        
      |           |     |           |                        \------------ maker-scaffold07217-augustus-gene-0.12-mRNA-1        (28)
      |           |     |           |                                                 
      |           |     |           |                              /------ maker-scaffold03209-snap-gene-0.21-mRNA-1            (22)
      |           |     |           \--------------85--------------+                  
      |           |     |                                          \------ maker-scaffold03027-augustus-gene-0.19-mRNA-1        (31)
      |           |     |                                                             
      |           |     |                                          /------ maker-scaffold00306-augustus-gene-0.18-mRNA-1        (9)
      |           |     |                                    /--99-+                  
      |           |     |                                    |     \------ maker-scaffold04113-augustus-gene-0.9-mRNA-1         (12)
      |     /--97-+     \-----------------100----------------+                        
      |     |     |                                          |     /------ maker-scaffold11527-augustus-gene-0.6-mRNA-1         (18)
      |     |     |                                          \-100-+                  
      |     |     |                                                \------ maker-scaffold06251-augustus-gene-0.5-mRNA-1         (20)
      |     |     |                                                                   
      |     |     |                                          /------------ maker-scaffold09435-augustus-gene-0.3-mRNA-1         (8)
      |     |     |                                          |                        
      |     |     |--------------------100-------------------+     /------ maker-scaffold02779-augustus-gene-0.16-mRNA-1        (16)
      \-100-+     |                                          \-100-+                  
            |     |                                                \------ maker-scaffold00005-snap-gene-2.51-mRNA-1            (26)
            |     |                                                                   
            |     |                                                /------ maker-scaffold05603-snap-gene-0.9-mRNA-1             (10)
            |     \-----------------------100----------------------+                  
            |                                                      \------ maker-scaffold07581-snap-gene-0.5-mRNA-1             (11)
            |                                                                         
            \------------------------------------------------------------- maker-scaffold02811-augustus-gene-0.20-mRNA-1        (13)