PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Oryza sativa subsp. japonica
GRAS FamilyPhylogenetic tree for domain ? help Back to Top |
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Subtree rooted at node 115: /----- LOC_Os11g04570.1/71-350 (2) /-100+ | \----- LOC_Os12g04370.1/169-476 (43) /-51-+ | \---------- LOC_Os12g04370.1/20-127 (25) /--92-+ | | /----- LOC_Os11g04590.1/3-434 (41) | \---100---+ /-93-+ \----- LOC_Os12g04380.1/3-438 (64) | | | | /----- LOC_Os12g04370.1/529-966 (35) | \------100------+ | \----- LOC_Os11g04570.1/406-843 (39) /-95-+ | | /----- LOC_Os05g31380.1/127-506 (24) | | /-98-+ | | | \----- LOC_Os05g31420.1/157-558 (50) | \------100------+ | | /----- LOC_Os01g71970.1/50-437 (49) | \-100+ | \----- LOC_Os06g10900.1/29-167 (51) | /------70------+ /----- LOC_Os05g49930.1/78-454 (7) | | /-100+ | | | \----- LOC_Os01g45860.1/86-449 (52) | |---------100--------+ | | \---------- LOC_Os03g49990.1/241-621 (42) | | | | /----- LOC_Os06g03710.1/217-594 (17) | | | | | |----- LOC_Os07g16330.1/170-224 (18) | \------------98-----------+ | |----- LOC_Os04g37440.1/2-66 (32) | | | \----- LOC_Os03g37900.1/38-134 (62) | | /----- LOC_Os07g39820.1/193-601 (3) | /---100---+ | | \----- LOC_Os03g31880.1/189-602 (53) | | | /------100------+ /----- LOC_Os07g40020.1/77-470 (10) | | | /-100+ | | | | \----- LOC_Os05g42130.1/37-423 (28) | | \-95-+ | | \---------- LOC_Os03g29480.1/134-520 (21) | | | | /--------------- LOC_Os07g36170.1/202-570 (4) | | | | /----61---+ | /----- LOC_Os10g22430.1/171-540 (19) | | | /-100-+ /-100+ | | | | | | \----- LOC_Os03g09280.1/167-535 (63) | | | | \-93-+ | | | /-100+ \---------- LOC_Os07g39470.1/174-543 (45) | | | | | | | | | \--------------------- LOC_Os01g65900.1/184-553 (56) | | \-100+ | | | /---------- LOC_Os04g49110.1/262-619 (5) | | | | | | \------100------+ /----- LOC_Os02g45760.1/254-618 (26) | | \-99-+ | | \----- LOC_Os02g21685.1/63-116 (60) | | | | /----- LOC_Os11g04400.1/339-541 (8) | | /-55-+ | | | \----- LOC_Os12g04200.1/167-546 (20) | | /-98-+ | | | \---------- LOC_Os11g04400.1/199-346 (46) /--67-+ | /--52-+ | | | | | /----- LOC_Os11g47910.1/216-585 (22) | |-55-+ | \---100---+ | | | | \----- LOC_Os11g47920.1/214-583 (34) | | | | | | | | /---------- LOC_Os11g47870.1/304-682 (27) | | | /-52-+ | | | | | |----100---+ /----- LOC_Os11g11600.1/3-120 (40) | | | | | \-100+ | | | | | \----- LOC_Os11g47890.1/258-633 (59) | | | /-52-+ | | | | | | \--------------------- LOC_Os11g47900.1/264-638 (37) | | | | | | | | | \-------------------------- LOC_Os12g38490.1/358-730 (55) | | | | | | | | /---------- LOC_Os03g48450.1/356-727 (13) | | | | | | | | /-92-+---------81---------+ /----- LOC_Os03g40080.1/434-663 (58) | | | | | \-66-+ | | | | | \----- LOC_Os03g40080.1/360-429 (66) | | | | | | | | | |------------------------------- LOC_Os04g50060.1/262-634 (23) | | \-51-+ | | | | \------------------------------- LOC_Os01g62460.1/444-813 (36) /-58-+ | | | | | | /----- LOC_Os01g67670.1/72-274 (9) | | | \--------------100-------------+ | | | \----- LOC_Os01g67650.1/157-531 (44) | | | | | | /----- LOC_Os12g02870.1/293-653 (12) | | | /-100+ | | | | \----- LOC_Os11g03110.1/284-644 (33) | | | /-100+ | | | | \---------- LOC_Os07g38030.1/69-434 (29) | | |--------------100-------------+ | | | \--------------- LOC_Os05g40710.1/117-484 (16) | | | | | | /----- LOC_Os02g10360.1/41-420 (14) /-100+ | |-------------------100------------------+ | | | | \----- LOC_Os06g40780.1/276-662 (48) | | | | | | | |---------------------------------------------- LOC_Os03g51330.1/209-578 (15) | | | | | | | |---------------------------------------------- LOC_Os11g31100.1/401-771 (30) | | | | | | | \---------------------------------------------- LOC_Os04g35250.1/86-495 (31) | | | --97-+ | \---------------------------------------------------- LOC_Os03g15680.1/132-525 (54) | | | | /----- LOC_Os12g06540.1/308-459 (6) | | | | \-------------------------69------------------------+----- LOC_Os12g06540.1/175-306 (38) | | | \----- LOC_Os11g06180.1/48-391 (61) | \-------------------------------------------------------------- LOC_Os06g01620.1/126-479 (11) Root part of tree: /------------------------------------------------------------------- LOC_Os04g46860.1/354-710 (1) | | /--------------------------------- LOC_Os02g44370.1/357-714 (47) |---------------100---------------+ + \--------------------------------- LOC_Os02g44360.1/351-708 (65) | | /--------------------------------- (115) \---------------100---------------+ \--------------------------------- LOC_Os10g40390.1/36-369 (57) |
Phylogenetic tree for protein ? help Back to Top |
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/------------------------------------------------------------------- LOC_Os12g38490.1 (1) | | /------- LOC_Os07g39470.1 (2) | /---52--+ | | \------- LOC_Os07g36170.1 (52) | /--100-+ | | | /------- LOC_Os03g09280.1 (9) | | \--100--+ | /---66--+ \------- LOC_Os10g22430.1 (28) | | | | | \---------------------- LOC_Os01g65900.1 (38) | /--100-+ | | | /--------------- LOC_Os04g49110.1 (10) | | | | | | \------100-----+ /------- LOC_Os02g45760.1 (12) | | \--100--+ | | \------- LOC_Os02g21685.1 (48) | /------55------+ | | | /------- LOC_Os07g39820.1 (11) | | | /------100-----+ | | | | \------- LOC_Os03g31880.1 (33) | | | | | | \------100-----+ /------- LOC_Os07g40020.1 (23) | | | /--100--+ | | | | \------- LOC_Os05g42130.1 (42) | | \--98--+ | | \--------------- LOC_Os03g29480.1 (41) | | | | /------- LOC_Os05g31380.1 (3) | | /----------99----------+ | | | \------- LOC_Os05g31420.1 (50) | | | | | | /------- LOC_Os01g71970.1 (14) | | /--100-+ /------100-----+ | | | | | \------- LOC_Os06g10900.1 (60) | | | | | | | | \---56--+ /------- LOC_Os11g04570.1 (17) | | | | /--100--+ | | | | | \------- LOC_Os12g04370.1 (30) | | | \--100-+ | | | | /------- LOC_Os12g04380.1 (26) | | /---53--+ \--100--+ | /---97--+ | | \------- LOC_Os11g04590.1 (40) | | | | | | | | | | /------- LOC_Os11g03110.1 (13) | | | | | /--100--+ | | | | | | \------- LOC_Os12g02870.1 (21) | | | | | /--100-+ | | | | | | \--------------- LOC_Os07g38030.1 (27) | | | | \------100-----+ | | | | \---------------------- LOC_Os05g40710.1 (51) | | | | | | | | /------- LOC_Os04g35250.1 (4) | | | |------------------83-----------------+ | | | | \------- LOC_Os04g37440.1 (5) | | | | + | | | /------- LOC_Os01g45860.1 (6) | | | | /--100--+ | | | | | \------- LOC_Os05g49930.1 (32) | | | | /--100-+ | | | | | \--------------- LOC_Os03g49990.1 (15) | | | |----------70----------+ | | | | \---------------------- LOC_Os11g31100.1 (31) | | | | | | | | /--------------- LOC_Os03g15680.1 (7) | | | | | | | | | /----------75---------+ /------- LOC_Os12g06540.1 (29) | | \--56--+ | \--100--+ | | | | \------- LOC_Os11g06180.1 (58) | | | | | | | | /--------------- LOC_Os04g46860.1 (34) |--78--+ |---54--+ | | | | | /--100-+ /------- LOC_Os02g44360.1 (36) | | | | | \--100--+ | | | | /---51--+ \------- LOC_Os02g44370.1 (43) | | | | | | | | | \--100-+ \---------------------- LOC_Os10g40390.1 (55) | | | | | | | \------------------------------ LOC_Os06g01620.1 (45) | | | | | | /------- LOC_Os03g37900.1 (8) | | | /---68--+ | | | | \------- LOC_Os07g16330.1 (59) | | |--------------69-------------+ | | | \--------------- LOC_Os06g03710.1 (19) | | | | | | /------- LOC_Os06g40780.1 (16) | | | /--100--+ | | | | \------- LOC_Os02g10360.1 (47) | | |-------------100-------------+ | | | \--------------- LOC_Os03g51330.1 (24) | | | | | | /------- LOC_Os01g67670.1 (25) | | \-----------------100-----------------+ | | \------- LOC_Os01g67650.1 (39) | | | | /--------------- LOC_Os01g62460.1 (44) | | | | | /--97--+ /------- LOC_Os03g40080.1 (49) | | | \--100--+ | \------------------95-----------------+ \------- LOC_Os03g48450.1 (56) | | | \---------------------- LOC_Os04g50060.1 (53) | | /------- LOC_Os11g04400.1 (18) | /--100--+ | | \------- LOC_Os12g04200.1 (37) | /------86------+ | | | /------- LOC_Os11g47910.1 (20) | | \---99--+ | | \------- LOC_Os11g47920.1 (35) | | \-----------------78-----------------+ /------- LOC_Os11g47890.1 (22) | /---99--+ | | \------- LOC_Os11g11600.1 (57) | /--99--+ | | \--------------- LOC_Os11g47870.1 (46) \--100--+ \---------------------- LOC_Os11g47900.1 (54) |