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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Castanea mollissima
C3H FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------- maker-scaffold00229-snap-gene-0.48-mRNA-1/127-147 (1) | | /-------------------------------------------------- maker-scaffold07117-augustus-gene-0.11-mRNA-1/158-182 (2) | | | |-------------------------------------------------- maker-scaffold00547-augustus-gene-0.26-mRNA-1/402-428 (4) | | | |-------------------------------------------------- maker-scaffold00547-augustus-gene-0.26-mRNA-1/223-244 (5) | | | | /-------- maker-scaffold01681-snap-gene-0.23-mRNA-1/85-110 (8) | | | | | |-------- maker-scaffold05639-augustus-gene-0.8-mRNA-1/52-77 (10) | |--------------------74-------------------+ | | |-------- maker-scaffold01951-augustus-gene-0.34-mRNA-1/53-77 (29) | | | | | \-------- maker-scaffold11466-snap-gene-0.6-mRNA-1/34-54 (30) | | | | /-------- maker-scaffold01681-snap-gene-0.23-mRNA-1/368-392 (14) | | /---80---+ | | | \-------- maker-scaffold00547-augustus-gene-0.26-mRNA-1/451-473 (40) | | /---72--+ | | | \----------------- maker-scaffold00088-augustus-gene-1.42-mRNA-1/266-292 (54) | | /---91--+ | | | \------------------------- maker-scaffold05639-augustus-gene-0.8-mRNA-1/375-398 (36) | | /---99---+ | | | \--------------------------------- maker-scaffold01951-augustus-gene-0.34-mRNA-1/349-370 (70) | |---97--+ | | \------------------------------------------ maker-scaffold07117-augustus-gene-0.11-mRNA-1/259-283 (28) | | | |-------------------------------------------------- maker-scaffold01951-augustus-gene-0.34-mRNA-1/97-123 (16) | | | |-------------------------------------------------- maker-scaffold00547-augustus-gene-0.26-mRNA-1/176-198 (17) | | | /---80---+-------------------------------------------------- maker-scaffold06955-augustus-gene-0.10-mRNA-1/42-60 (19) | | | | | |-------------------------------------------------- snap_masked-scaffold00506-abinit-gene-0.17-mRNA-1/18-39 (24) | | | | | |-------------------------------------------------- maker-scaffold01681-snap-gene-0.23-mRNA-1/172-194 (26) | | | | | |-------------------------------------------------- maker-scaffold07117-augustus-gene-0.11-mRNA-1/210-236 (27) | | | | | |-------------------------------------------------- maker-scaffold02226-augustus-gene-0.29-mRNA-1/244-263 (31) | | | | | |-------------------------------------------------- maker-scaffold01951-augustus-gene-0.34-mRNA-1/300-326 (37) | | | | | |-------------------------------------------------- maker-scaffold07117-augustus-gene-0.11-mRNA-1/336-361 (39) | | | | | | /-------- maker-scaffold05639-augustus-gene-0.8-mRNA-1/144-169 (41) | | |--------------------94-------------------+ | | | \-------- maker-scaffold01951-augustus-gene-0.34-mRNA-1/144-169 (68) | | | | | |-------------------------------------------------- maker-scaffold05639-augustus-gene-0.8-mRNA-1/328-352 (48) | | | | | |-------------------------------------------------- maker-scaffold00088-augustus-gene-1.42-mRNA-1/220-246 (55) | | | | | |-------------------------------------------------- maker-scaffold01681-snap-gene-0.23-mRNA-1/134-149 (58) | | | | | |-------------------------------------------------- maker-scaffold06955-augustus-gene-0.10-mRNA-1/91-114 (61) | | | | | |-------------------------------------------------- maker-scaffold00547-augustus-gene-0.26-mRNA-1/267-291 (67) | | | | | |-------------------------------------------------- maker-scaffold01681-snap-gene-0.23-mRNA-1/325-350 (71) | | | | | \-------------------------------------------------- maker-scaffold05639-augustus-gene-0.8-mRNA-1/99-123 (72) | | | | /-------- maker-scaffold02933-snap-gene-0.14-mRNA-1/273-297 (3) | | /-------97-------+ | | | \-------- maker-scaffold02593-augustus-gene-0.19-mRNA-1/262-286 (43) | | | | | | /-------- maker-scaffold02933-snap-gene-0.14-mRNA-1/39-62 (6) | | | /---98---+ | | | | \-------- maker-scaffold02593-augustus-gene-0.19-mRNA-1/35-58 (74) | | |---89--+ | | | \----------------- snap_masked-scaffold07695-abinit-gene-0.16-mRNA-1/163-188 (75) | | | + | | /-------- maker-scaffold00818-augustus-gene-0.56-mRNA-1/82-106 (9) | | |-------59-------+ | | | \-------- maker-scaffold11770-snap-gene-0.5-mRNA-1/237-257 (33) | | | | | | /-------- maker-scaffold07695-snap-gene-0.19-mRNA-1/321-339 (11) | | |-------100------+ | | | \-------- snap_masked-scaffold07695-abinit-gene-0.16-mRNA-1/224-249 (50) | | | | | | /-------- augustus_masked-scaffold04468-abinit-gene-0.6-mRNA-1/141-161 (15) | | | | | | | /---53---+-------- augustus_masked-scaffold01690-abinit-gene-0.5-mRNA-1/127-147 (56) | | | | | | | | | \-------- augustus_masked-scaffold06090-abinit-gene-0.2-mRNA-1/88-108 (73) | | | | |---97--+ | |----------------- augustus_masked-scaffold10368-abinit-gene-0.2-mRNA-1/279-299 (20) | | | | | | |---63--+----------------- augustus_masked-scaffold00485-abinit-gene-0.10-mRNA-1/270-290 (22) | | | | | | | |----------------- augustus_masked-scaffold02781-abinit-gene-0.0-mRNA-1/127-147 (52) | | | | | |----------------54---------------+ | /-------- augustus_masked-scaffold00079-abinit-gene-1.8-mRNA-1/278-298 (66) | | | \---97---+ | | | \-------- augustus_masked-scaffold00481-abinit-gene-0.5-mRNA-1/314-334 (69) | | | | | |------------------------- augustus_masked-scaffold07720-abinit-gene-0.1-mRNA-1/135-160 (18) | | | | | | /-------- maker-scaffold02933-snap-gene-0.14-mRNA-1/106-131 (21) | | |-------92-------+ | | | \-------- maker-scaffold02593-augustus-gene-0.19-mRNA-1/100-124 (25) | | | | | |------------------------- maker-scaffold03602-snap-gene-0.18-mRNA-1/307-328 (23) | | | | | |------------------------- maker-scaffold04505-augustus-gene-0.13-mRNA-1/268-293 (34) | | | | | |------------------------- maker-scaffold00818-augustus-gene-0.56-mRNA-1/225-249 (38) | | | | | |------------------------- maker-scaffold02226-augustus-gene-0.29-mRNA-1/398-425 (44) | | | | | |------------------------- maker-scaffold00818-augustus-gene-0.56-mRNA-1/147-166 (46) | | | | | |------------------------- maker-scaffold11466-snap-gene-0.6-mRNA-1/143-165 (47) | | | | | |------------------------- snap_masked-scaffold07695-abinit-gene-0.16-mRNA-1/89-113 (51) | | | | | |------------------------- maker-scaffold01795-snap-gene-0.38-mRNA-1/92-119 (53) | | | | | |------------------------- augustus_masked-scaffold01775-abinit-gene-0.7-mRNA-1/307-331 (60) | | | | | \------------------------- augustus_masked-scaffold01775-abinit-gene-0.7-mRNA-1/270-294 (64) | | | |----------------------------------------------------------- maker-scaffold18790-augustus-gene-0.4-mRNA-1/542-562 (7) | | | |----------------------------------------------------------- maker-scaffold04863-augustus-gene-0.19-mRNA-1/59-81 (12) | | | | /-------- maker-scaffold00818-snap-gene-0.59-mRNA-1/85-106 (13) | | /---100--+ | | | \-------- maker-scaffold00700-augustus-gene-0.43-mRNA-1/148-170 (49) | | | | | | /-------- maker-scaffold11466-snap-gene-0.6-mRNA-1/3-26 (45) | |--------------------54-------------------+---72---+ | | | \-------- maker-scaffold11770-snap-gene-0.5-mRNA-1/298-320 (59) | | | | | \----------------- maker-scaffold00669-augustus-gene-0.35-mRNA-1/169-188 (57) | | | | /-------- maker-scaffold05349-augustus-gene-0.22-mRNA-1/201-226 (35) | |------------------------100-----------------------+ | | \-------- snap_masked-scaffold12258-abinit-gene-0.3-mRNA-1/198-223 (62) | | | |----------------------------------------------------------- maker-scaffold11770-snap-gene-0.5-mRNA-1/175-197 (42) | | | \----------------------------------------------------------- maker-scaffold02961-snap-gene-0.26-mRNA-1/1559-1582 (63) | | /-------- maker-scaffold07229-snap-gene-0.10-mRNA-1/142-163 (32) \----------------------------97----------------------------+ \-------- maker-scaffold07150-snap-gene-0.5-mRNA-1/161-182 (65) |