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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Linum usitatissimum
B3 FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------ Lus10025388/161-252 (1) | |------------------------------------------------------------------ Lus10015266/222-320 (59) | | /---------------------- Lus10026234/344-430 (2) | | | | /----- Lus10026265/158-255 (11) | | /-100-+ | | | \----- Lus10042406/155-252 (42) | | /-100+ | | | \----------- Lus10026264/153-253 (129) | | | | /------------93------------+--95-+---------------- Lus10026921/107-186 (72) | | | | | | | \---------------- Lus10026234/210-301 (83) | | | | | | /----- Lus10026265/301-388 (63) | | | /--89-+ | | | | \----- Lus10026264/297-386 (139) | | \----89----+ | | \----------- Lus10026921/265-350 (120) | | | | /----------- Lus10012039/11-105 (3) | | | | | /-100+ /----- Lus10012045/11-92 (26) | | | \--83-+ | | | \----- Lus10027942/12-100 (96) | | | | | | /----- Lus10027940/8-89 (38) | | | /--97-+ | | | | \----- Lus10012041/8-86 (80) | | /--72-+-100+ | | | | \----------- Lus10023844/8-97 (113) | | | | | | | | /----- Lus10023843/16-104 (55) | | | | /--97-+ | | | | | \----- Lus10021007/17-104 (89) | | | \-100+ | |------------65------------+ | /----- Lus10014528/16-101 (88) | | | \--94-+ | | | \----- Lus10032159/16-102 (98) | | | | | | /----- Lus10041961/6-96 (52) | | | /-100-+ | | | | \----- Lus10017970/6-96 (60) | | \----100---+ | | \----------- Lus10008529/10-99 (119) | | | | /----------- Lus10021006/8-99 (4) | | | | |-----------------100-----------------+ /----- Lus10027940/250-340 (34) | | \-100-+ | | \----- Lus10012041/248-338 (154) | | | | /----- Lus10038189/179-255 (5) | |--------------------100--------------------+ | | \----- Lus10025913/179-261 (21) | | | | /----- Lus10012572/120-219 (6) | | /----100---+ | | | \----- Lus10041521/123-222 (91) | | | | | /-100-+ /----- Lus10022820/225-321 (7) | | | | /-100-+ | | | | | \----- Lus10011888/557-655 (20) | | | \-84-+ | | | \----------- Lus10015428/126-211 (127) | | | | | /-100+ /----- Lus10011245/669-768 (19) | | | | | | | | | /----100---+----- Lus10018440/333-432 (76) | | | | | | | | | | | \----- Lus10011245/332-431 (81) | | | | | | | | \-100-+ /----- Lus10025226/332-432 (66) | | | | /--50-+ | | | | | \----- Lus10025142/332-431 (118) | | | \-95-+ | | /--66-+ \----------- Lus10022741/295-394 (153) | | | | | | | | /----------- Lus10034276/47-150 (30) | | | | | | | | | /-98-+ /----- Lus10004226/37-153 (95) | | | | | \--99-+ | | | |----84----+ \----- Lus10021326/78-179 (117) | |-------80------+ | | | | | | \---------------- Lus10026212/36-129 (78) | | | | | | | \--------------------------- Lus10016091/108-209 (70) | | | | | | /----- Lus10011114/54-155 (120) | | \------------100------------+ | | \----- Lus10043234/72-175 (125) | | | | /----- Lus10010759/29-120 (8) | | /--58-+ | | | \----- Lus10035637/41-132 (130) | | | | | /-62-+----------- Lus10010756/33-118 (44) | | | | | | | \----------- Lus10002425/20-111 (122) | | | | | |---------------- Lus10025669/44-127 (18) | |---------------97---------------+ | | | /----------- Lus10027943/155-248 (22) | | | | | | | | /----- Lus10012038/91-182 (56) | | \-100+--68-+ | | | \----- Lus10012046/153-245 (90) | | | | | \----------- Lus10012040/52-139 (160) | | | | /----- Lus10017434/147-237 (9) | | /-------100------+ | | | \----- Lus10007522/181-271 (151) | | | | | | /----------- Lus10035416/71-160 (28) | | /-96-+ | | | | | /-100+ /----- Lus10019354/442-526 (36) | | | | | \--94-+ | | | \--95-+ \----- Lus10031022/53-130 (99) | | | | | | /--96-+ \---------------- Lus10019873/111-200 (141) | | | | | | | | /----- Lus10014044/130-219 (54) | | | | /--99-+ | | | | | \----- Lus10019870/129-218 (75) | | | \------100------+ | | | | /----- Lus10009764/133-216 (180) | | | \-100-+ | | /-95-+ \----- Lus10006483/156-228 (128) | | | | | | | | /----- Lus10019871/114-203 (57) | | | | /-100-+ | | | | | \----- Lus10014043/23-99 (143) | | /--91-+ |----------94---------+ | | | | | \----------- Lus10019872/106-196 (159) + | | | | | | | | \--------------------------------- Lus10032098/82-171 (137) | |-96-+ | | | | \-------------------------------------- Lus10032098/262-350 (111) | | | | | | /----- Lus10024689/146-231 (45) | | \------------------100-----------------+ | | \----- Lus10032315/465-541 (124) | | | | /---------------- Lus10032871/291-374 (10) | | | | | | /----- Lus10016286/200-280 (13) | |---------------99---------------+ /-100-+ | | | | \----- Lus10023691/244-328 (94) | | \-98-+ | | | /----- Lus10016285/360-442 (25) | | \-100-+ | | \----- Lus10032873/363-446 (148) | | | | /----- Lus10025507/197-292 (12) | | /-100-+ | | | \----- Lus10026724/166-250 (65) | /--57-+ | | | | /----100---+----------- Lus10025533/722-805 (27) | | | | | | | | | \----------- Lus10025505/100-182 (58) | | | | | | |------------52------------+ /----- Lus10022473/229-321 (51) | | | | /----100---+ | | | | | \----- Lus10016777/255-345 (62) | | | | | | | | \--87-+ /----- Lus10009214/20-80 (82) | | | | /--61-+ | | | | | \----- Lus10009688/243-336 (150) | | | \-100+ | | | \----------- Lus10036045/245-338 (190) | | | | | | /----------- Lus10000750/144-212 (14) | | | | | | |-----------------100-----------------+ /----- Lus10000747/268-347 (43) | | | \--79-+ | | | \----- Lus10000748/144-217 (71) | | | | | | /----- Lus10015248/145-222 (15) | | |--------------------100--------------------+ | | | \----- Lus10015266/441-525 (146) | | | | | | /----- Lus10023079/15-99 (16) | | | /---------100---------+ | | | | \----- Lus10032389/16-98 (64) | | | | | | | | /---------------- Lus10009688/24-118 (33) | | | | | | | | /--72-+ | /----- Lus10025507/16-111 (97) | | | | | /--82-+ /-100-+ | | | | | | | | \----- Lus10025534/17-110 (100) | | | | | | \-100+ | | | | \-100+ \----------- Lus10025506/13-109 (132) | | |-------86------+ | | | | | \---------------------- Lus10036045/32-120 (77) | | | | | | | | /----- Lus10014359/20-122 (116) | | | \------------100------------+ | | | \----- Lus10026067/19-120 (152) | | | | | | /----- Lus10023843/295-387 (17) | | | /-100-+ | | | | \----- Lus10019977/44-137 (145) | | | /-52-+ | | | | \----------- Lus10040408/41-138 (130) | | | /-100-+ | | | | | /----- Lus10014528/304-393 (144) | | | | \----100---+ | | |------------75------------+ \----- Lus10032159/285-379 (157) | | | | | | | | /----- Lus10012039/174-272 (46) | | | \-------100------+ | | | \----- Lus10027942/174-266 (47) | | | | | | /----- Lus10000748/19-92 (23) | | | /-100-+ | | | | \----- Lus10000747/148-226 (135) | | |-----------------100-----------------+ | | | \----------- Lus10000750/23-102 (138) | | | | | |------------------------------------------------- Lus10039303/536-625 (24) | | | | | | /----- Lus10016286/2-73 (29) | | | /--98-+ | | | | \----- Lus10023691/45-119 (32) | | | /-63-+ | | | | \----------- Lus10032749/5-68 (170) | | | /--80-+ | | | | | /----- Lus10016285/47-130 (31) | | | | \----100---+ | | |------------97------------+ \----- Lus10032873/27-112 (85) | | | | | /-100+ | \---------------------- Lus10032871/35-114 (49) | | | | | | | | /----- Lus10008460/15-114 (35) | | | |---------------------98--------------------+ | | | | \----- Lus10003313/15-103 (121) | | | | | | | | /----- Lus10032748/231-311 (37) | | | |--------------------100--------------------+ | | | | \----- Lus10032748/443-534 (160) | | | | | | | |------------------------------------------------- Lus10012521/3-74 (39) | | | | | | | | /----- Lus10039303/31-116 (41) | | | | /-100-+ | | | | | \----- Lus10027543/2-89 (79) | | | |------------------93-----------------+ | | | | \----------- Lus10015266/25-109 (142) | | | | | | | | /----------- Lus10010759/210-313 (48) | | | | | | | | | /-50-+ /----- Lus10010756/206-309 (73) | | | | | \--88-+ | | | | | \----- Lus10035637/487-592 (126) | | | | | | | | |---------------79---------------+---------------- Lus10025669/303-384 (61) | | | | | | | | | |---------------- Lus10002426/5-92 (68) | | | | | | | | | \---------------- Lus10035637/232-318 (156) | | | | | | | | /----- Lus10026265/17-92 (50) | | | | /--84-+ | | | | | \----- Lus10042406/17-92 (53) | | | | /-96-+ | | | | | \----------- Lus10026264/18-87 (136) | | | |---------------100--------------+ | | | | \---------------- Lus10026234/68-143 (69) | | | | | | | | /----- Lus10022473/44-99 (74) | | | | /-100-+ \-100-+ | | | \----- Lus10016777/29-114 (114) | | |------------------59-----------------+ | | | \----------- Lus10010080/12-121 (110) | | | | | | /----- Lus10041961/183-262 (84) | | |--------------------100--------------------+ | | | \----- Lus10017970/183-262 (147) | | | | | |------------------------------------------------- Lus10023079/139-223 (86) | | | | | | /----- Lus10014359/150-243 (87) | | |--------------------100--------------------+ | | | \----- Lus10026067/150-240 (155) | | | | | |------------------------------------------------- Lus10002934/45-110 (92) | | | | | |------------------------------------------------- Lus10004924/20-107 (93) | | | | | |------------------------------------------------- Lus10037323/211-289 (110) | | | | | |------------------------------------------------- Lus10026425/126-219 (140) | | | | | |------------------------------------------------- Lus10012046/330-415 (150) | | | | | | /----- Lus10025913/10-105 (112) | | |--------------------100--------------------+ | | | \----- Lus10038189/10-105 (149) | | | | | |------------------------------------------------- Lus10010080/232-315 (115) | | | | | | /----- Lus10000746/15-100 (131) | | \--------------------100--------------------+ | | \----- Lus10019652/6-84 (158) | | | \------------------------------------------------------- Lus10002934/257-358 (140) | | /----------- Lus10000368/126-220 (40) | | | | /----- Lus10039303/197-297 (67) | |-100-+ \-----------------------74-----------------------+ \----- Lus10027543/192-275 (133) | | /----- Lus10027543/375-456 (123) \-100-+ \----- Lus10039303/370-471 (134) |
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 185: /---------- Lus10008529 (2) | /--------------100-------------+ /----- Lus10017970 (11) | \-100+ | \----- Lus10041961 (43) | | /----- Lus10025505 (6) | /------89------+ | | \----- Lus10025533 (100) | | | | /---------- Lus10025534 (23) | /-89-+ | | | | /-63-+ /----- Lus10025507 (26) | | | | \-100+ | | \-98-+ \----- Lus10026724 (120) | | | | /-57-+ \--------------- Lus10025506 (41) | | | | | | /----- Lus10009214 (7) | | | /-70-+ | | | | \----- Lus10009688 (31) | /--89-+ \------100-----+ | | | \---------- Lus10036045 (34) | | | | | | /----- Lus10016777 (22) | | \-----------100----------+ |-54-+ \----- Lus10022473 (55) | | | | /----- Lus10003313 (52) | | /-100+ | | | \----- Lus10008460 (170) | \------------83-----------+ | | /----- Lus10032389 (60) | \-100+ | \----- Lus10023079 (66) | |----------------------------------------- Lus10012521 (8) | | /----- Lus10026067 (9) |----------------100----------------+ | \----- Lus10014359 (51) | | /----- Lus10023843 (10) | /-100+ | | \----- Lus10021007 (21) | /-50-+ | | \---------- Lus10019977 (45) | /-97-+ | | | /----- Lus10014528 (73) | | \---100---+ | /-98-+ \----- Lus10032159 (83) | | | | | \-------------------- Lus10040408 (37) | /----93----+ | | | /---------- Lus10027942 (44) | | | | /-57-+ | \------100-----+ /----- Lus10012045 (46) | | | \-99-+ | | | \----- Lus10012039 (59) | | | | | | /----- Lus10010759 (19) | | | /-95-+ | | | | \----- Lus10035637 (53) | |-78-+ /-95-+ | | | | \---------- Lus10010756 (38) | | | /-88-+ | | | | \--------------- Lus10002425 (130) | | | /-50-+ | | | | \-------------------- Lus10002426 (97) | | | /-86-+ | | | | \------------------------- Lus10025669 (54) | | | | | | | | /---------- Lus10027943 (69) | | \--90-+ | | | | /-100+ /----- Lus10012046 (77) | | | | \-100+ | | \------100-----+ \----- Lus10012038 (93) | | | | | \--------------- Lus10012040 (150) | | | | /----- Lus10039303 (14) | | /---100---+ | | | \----- Lus10027543 (65) | | | | | /-91-+ /----- Lus10015266 (24) | | | | /-95-+ | | | | | \----- Lus10015248 (92) | |---------70---------+ \-95-+ | | | \---------- Lus10025388 (96) | | | | | \-------------------- Lus10002934 (78) | | | |----------------------------------------- Lus10004924 (16) | | | |----------------------------------------- Lus10026425 (17) | | | |----------------------------------------- Lus10010080 (35) /-56-+ | | | | /----- Lus10025913 (56) | | |----------------100----------------+ | | | \----- Lus10038189 (72) | | | | | | /----- Lus10027940 (58) | | | /-100+ | | | | \----- Lus10012041 (86) | | | /-100+ | | | | \---------- Lus10023844 (91) | | | /-92-+ | | | | \--------------- Lus10021006 (160) | | \---------52---------+ | | \-------------------- Lus10037323 (79) | | | | /----- Lus10016285 (3) | | /-100+ | | | \----- Lus10032873 (4) | | /-72-+ | | | | /----- Lus10023691 (42) | | | \-100+ | | /-60-+ \----- Lus10016286 (95) | | | | | |------------97-----------+ \--------------- Lus10032871 (25) /-59-+ | | | | | \-------------------- Lus10032749 (40) | | | | | | /--------------- Lus10026234 (18) | | | | | | | /-100+ /---------- Lus10026264 (33) | | | | | | | | | | \-100+ /----- Lus10042406 (67) | | | | \-100+ | | | | \----- Lus10026265 (99) | | |------------66-----------+ | | | | /----- Lus10000747 (80) | | | | /-87-+ | | | | | \----- Lus10000748 (110) | | | \----98---+ | | | \---------- Lus10000750 (98) | | | | | \---------------------------------------------- Lus10032748 (89) | | | | /----- Lus10000746 (12) | |---------------------100---------------------+ | | \----- Lus10019652 (61) | | | \--------------------------------------------------- Lus10026921 (76) | | /----- Lus10031022 (15) | | | /-92-+----- Lus10035416 (68) | | | | /----75---+ \----- Lus10019354 (88) | | | | | \---------- Lus10019873 (39) /-65-+ | | | | /----- Lus10024689 (27) | | /-71-+ /-100+ | | | | | \----- Lus10032315 (57) | | | | /-100+ | | | | | \---------- Lus10032098 (140) | | | | | | | | \-95-+ /----- Lus10014043 (48) | | | | /-100+ | | | | | \----- Lus10019871 (82) | | | \-95-+ | | | \---------- Lus10019872 (71) | |--------------70--------------+ | | | /----- Lus10019870 (28) | | | /-100+ | | | | \----- Lus10014044 (62) | | |------99------+ | | | | /----- Lus10009764 (36) | | | \-100+ --89-+ | | \----- Lus10006483 (63) | | | | | | /----- Lus10007522 (70) | | \--------100--------+ | | \----- Lus10017434 (75) | | | | /----- Lus10011114 (29) | |------------------------100-----------------------+ | | \----- Lus10043234 (90) | | | |-------------------------------------------------------- Lus10000368 (85) | | | \-------------------------------------------------------- Lus10016091 (94) | | /----- Lus10004226 (5) | /-83-+ | | \----- Lus10021326 (87) | /-76-+ | | \---------- Lus10034276 (13) \----------------------90---------------------+ \--------------- Lus10026212 (74) Root part of tree: /------------------------------------------------------------------ Lus10011888 (1) | |------------------------------------------------------------------ Lus10022820 (84) | | /-------------------------------------- (185) | | | | /--------- Lus10025226 (20) | | /---100---+ | /---90---+ | \--------- Lus10025142 (64) + | | /---100--+ | | | | \------------------- Lus10022741 (81) | | \---100---+ | | | /--------- Lus10011245 (47) | /----94---+ \--------100-------+ | | | \--------- Lus10018440 (49) | | | | | | /--------- Lus10041521 (30) \---100--+ \-----------------100-----------------+ | \--------- Lus10012572 (32) | \--------------------------------------------------------- Lus10015428 (50) |