PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Camelina sativa
AP2 FamilyPhylogenetic tree for domain ? help Back to Top |
---|
/------------------------------------------------------------------ Csa12g022440.1/272-296 (1) | |------------------------------------------------------------------ Csa12g022440.1/143-193 (40) | | /---------------------- Csa11g019080.1/181-231 (2) | | | | /---------------- Csa11g019070.1/48-97 (29) | /-87-+ | | | | | /----------- Csa11g019080.1/53-102 (48) | | | | | | | \--69-+-88-+ /----- Csa17g016820.1/216-266 (82) | | | \-100-+ | | | \----- Csa17g016820.1/29-79 (85) | | | | /--52-+ \---------------- Csa11g019070.1/224-273 (130) | | | | | | /----- Csa05g092310.1/171-220 (20) | | | /----93----+ | | | | \----- Csa05g092310.1/70-119 (24) | | | | | | \----68----+ /----- Csa06g038270.1/174-201 (38) | | | /--61-+ | | | | \----- Csa06g038270.1/45-94 (121) | /-100+ \-63-+ | | | | /----- Csa16g041380.1/112-162 (60) | | | \-100-+ | | | \----- Csa16g041380.1/44-95 (150) | | | | | | /----- Csa11g083670.1/69-118 (35) | | | /-100-+ | | | | \----- Csa11g083670.1/165-214 (53) | | | | | /-------65-------+ \---------100---------+ /----- Csa16g055760.1/323-371 (58) | | | | | | | | | |----- Csa16g055760.1/92-140 (79) | | | \-100-+ | | | |----- Csa07g064370.1/91-139 (112) | | | | | | | \----- Csa07g064370.1/187-235 (128) | | | | | | /----- Csa19g048440.1/249-316 (62) | | \---------------100--------------+ | | \----- Csa19g048440.1/83-133 (93) | | | | /----------- Csa10g003350.1/285-341 (3) | | | | | /----90----+ /----- Csa16g037880.1/236-289 (26) | | | | | | | | \--53-+----- Csa09g077150.1/233-289 (43) | | | | | | | \----- Csa16g035260.1/231-287 (92) | | | | | | /----- Csa20g025580.1/198-253 (9) | | | | | | |-------67-------+----- Csa13g020200.1/210-266 (37) | | | | | | | \----- Csa08g009620.1/307-363 (123) | | /-90-+ | | | | /----- Csa08g054010.1/279-335 (15) | | | | /--99-+ | | | | | \----- Csa20g015840.1/275-331 (45) | | | | | | | | | |----------- Csa11g102540.1/226-283 (32) | | | | /-96-+ | | | | | |----------- Csa18g039070.1/236-293 (70) | | | | | | | | | | | \----------- Csa02g074260.1/165-222 (114) | | /--70-+ \--76-+ | | | | | /----- Csa03g058080.1/189-245 (39) | | | | | | | | | | \----82----+----- Csa18g030400.1/203-259 (122) | | | | | | | | | \----- Csa02g061860.1/200-256 (127) | | | | | | | | /----- Csa15g031200.1/180-246 (71) | | | | /-100-+ | | /-72-+ | | \----- Csa19g028820.1/177-243 (119) | | | | \-------67------+ | | | | \----------- Csa14g059520.1/189-256 (88) | | | | | | | | /----- Csa11g003790.1/252-311 (69) | | | |-------------91------------+ | | | | \----- Csa12g003630.1/285-344 (190) | | | | | | | \--------------------------------- Csa11g090950.1/202-261 (81) | | | | | /-100-+ /----- Csa06g047660.1/72-105 (8) | | | | /--93-+ | | | | | \----- Csa04g056170.1/72-105 (33) | | | | /-57-+ | | | | | \----------- Csa05g009930.1/116-172 (80) | | | | | | | | | /--91-+ /----- Csa17g021650.1/54-110 (10) | | | | | | | | | | | | \----100---+----- Csa03g019870.1/53-109 (49) | | | \-------91------+ | | | | | \----- Csa14g020190.1/53-109 (131) | | | | | | | \---------------------- Csa06g028810.1/66-125 (75) | | | | | | /----- Csa05g014000.1/106-155 (11) + | | /--99-+ | | /-95-+ | \----- Csa04g053240.1/104-153 (97) | | | | | | | | | |----------- Csa09g065810.1/114-163 (51) | | | | /-55-+ | | | | | |----------- Csa04g041170.1/120-169 (57) | | | | | | | | | | | \----------- Csa06g029500.1/120-169 (67) | | | | | | | | | |---------------- Csa05g036990.1/152-201 (25) | | | | | | | | | |---------------- Csa12g004190.1/114-163 (30) | | | | | | | | | |---------------- Csa07g015990.1/145-194 (36) | | | | | | | | | | /----- Csa02g067000.1/157-206 (64) | | | | | | | | | \------------100------------+----66----+----- Csa18g033410.1/158-207 (84) | | | | | | | | | \----- Csa11g094020.1/158-207 (170) | | | | | | | |---------------- Csa11g103760.1/103-152 (83) | | | | | | | |---------------- Csa10g003930.1/43-71 (95) | | | | | | | |---------------- Csa16g016570.1/133-182 (99) | | | | | | | |---------------- Csa11g004440.1/198-247 (160) | | | | | | | \---------------- Csa02g075520.1/97-146 (125) | | | | | | /---------------- Csa16g037880.1/321-366 (4) | | | | | | | |---------------- Csa03g058080.1/290-339 (13) | | | | | | | |---------------- Csa09g077150.1/332-383 (14) | | | | | | | |---------------- Csa16g035260.1/330-381 (16) | | | | | | | | /----------- Csa08g009620.1/406-457 (18) | | | | | | | | | | /----- Csa11g003790.1/354-405 (55) | | | | | | | /-100+-100-+ | |--89-+----- Csa12g003630.1/387-438 (89) | | | | | | | | | | | |-63-+ \----- Csa10g003350.1/384-435 (118) | | | | | | | | | | | |----------- Csa20g025580.1/296-347 (63) | | | | | | | | | | | |----------- Csa14g059520.1/301-356 (74) | | | | | | | | | | | \----------- Csa13g020200.1/309-360 (116) | | | | | | | | | /--96-+---------------- Csa15g031200.1/291-340 (22) | | | | | | | | | | | |---------------- Csa01g023920.1/300-349 (27) | | | | | | | | | | | |---------------- Csa17g089940.1/218-267 (31) | | | | | | | | | | | | /----- Csa13g012280.1/407-458 (44) | | | | | | | | | | | | | |----- Csa08g054010.1/378-429 (46) | | | | | | | | | | | | |----94----+----- Csa02g074260.1/266-315 (94) | | | | | | | | | | | | | |----- Csa20g015840.1/374-425 (100) | | | | | | | | | | | | | \----- Csa11g102540.1/354-403 (120) | | | | | | | | | | /-96-+ |---------------- Csa11g090950.1/306-355 (54) | | | | | | | | | | | | | |---------------- Csa18g030400.1/304-353 (56) | | | | | | | | | | | | | |---------------- Csa02g061860.1/301-350 (86) | | | | | | | | | | | | | \---------------- Csa19g028820.1/288-337 (110) | | | | | | | | | | | | /----- Csa04g040400.1/201-253 (23) | | | | | | | | | | | | | /----79----+----- Csa09g064030.1/215-267 (61) | | | | | | | | | | | | | | | \----- Csa06g028810.1/168-220 (73) | | | | | | | | | | | | | | /----------- Csa07g058830.1/76-127 (47) | | | | | \--99-+ | | | | \---------100---------+ | |----------- Csa09g093970.1/76-127 (52) | | | | | | | | | | | | /----- Csa14g020190.1/152-203 (76) | | | | \-76-+ | | | | | |--94-+----- Csa17g021650.1/153-204 (110) | | | | | | | | | | | \----- Csa03g019870.1/152-203 (180) | | | | | | | | | \----------- Csa16g049360.1/76-127 (111) | | | | | | | | /---------------- Csa10g003930.1/189-239 (34) | | | | | | | | | |---------------- Csa12g004190.1/206-256 (50) | | | | | | | | | | /----------- Csa11g103760.1/195-252 (65) | | | | | | \--96-+ | \----100---+-100+ /----- Csa18g040290.1/173-223 (66) | | | \--94-+ | | | \----- Csa02g075520.1/189-239 (120) | | | | | |---------------- Csa11g004440.1/290-340 (91) | | | | | \---------------- Csa16g016570.1/225-274 (130) | | | | /----- Csa06g054060.1/51-99 (5) | |-----------------------100-----------------------+ | | \----- Csa06g054060.1/124-172 (117) | | | | /----- Csa18g020670.1/75-124 (6) | |-----------------------100-----------------------+ | | \----- Csa18g020670.1/229-278 (41) | | | | /----- Csa05g002870.1/163-206 (7) | | /-100-+ | | | \----- Csa05g002870.1/56-106 (77) | |---------------------50--------------------+ | | | /----- Csa20g026950.1/36-84 (113) | | \-100-+ | | \----- Csa20g026950.1/157-205 (115) | | | | /----- Csa19g033650.1/161-212 (17) | |------------------------97-----------------------+ | | \----- Csa19g033650.1/19-70 (19) | | | | /----- Csa05g021640.1/185-234 (21) | |------------------------95-----------------------+ | | \----- Csa05g021640.1/70-119 (90) | | | | /----- Csa06g005470.1/147-195 (28) | |-----------------------100-----------------------+ | | \----- Csa06g005470.1/443-491 (42) | | | | /----- Csa11g097420.1/111-138 (59) | | /-100-+ | | | \----- Csa11g097420.1/140-181 (124) | | | | | | /----- Csa11g082690.1/235-285 (68) | | |--50-+ | |--------------------100--------------------+ \----- Csa18g022000.1/237-287 (72) | | | | | |----------- Csa18g022000.1/77-100 (87) | | | | | \----------- Csa11g082690.1/53-103 (129) | | | | /----- Csa17g088380.1/224-273 (78) | |-----------------------100-----------------------+ | | \----- Csa17g088380.1/30-79 (98) | | | | /----- Csa02g051510.1/159-209 (96) | \-----------------------100-----------------------+ | \----- Csa02g051510.1/347-382 (140) | | /----- Csa16g057110.1/392-442 (12) \--------------------------100-------------------------+ \----- Csa16g057110.1/138-188 (126) |
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 141: /----- Csa02g074260.1 (2) /-59-+ | \----- Csa18g039070.1 (56) /-100+ | \---------- Csa11g102540.1 (38) | /----100---+ /----- Csa20g015840.1 (45) | | /-72-+ | | | \----- Csa13g012280.1 (75) | \-100+ | \---------- Csa08g054010.1 (57) | | /----- Csa11g003790.1 (6) | /-53-+ | | \----- Csa10g003350.1 (21) | /-100+ | | \---------- Csa12g003630.1 (74) | | |----59----+ /----- Csa16g037880.1 (25) | | /-88-+ | | | \----- Csa16g035260.1 (73) | \-100+ | \---------- Csa09g077150.1 (37) | | /---------- Csa19g028820.1 (11) /-----------100-----------+ | | | /-100+ /----- Csa01g023920.1 (46) | | | \-82-+ | | | \----- Csa15g031200.1 (66) | | /-100-+ | | | | /----- Csa03g058080.1 (14) | | | | | | | | \---100---+----- Csa14g059520.1 (48) | | | | | |-93-+ \----- Csa17g089940.1 (77) | | | | | | /----- Csa08g009620.1 (17) | | | /-88-+ | | | | \----- Csa20g025580.1 (34) | | \----100---+ | | \---------- Csa13g020200.1 (64) | | | | /---------- Csa11g090950.1 (20) | | | | \------100------+ /----- Csa18g030400.1 (65) | \-100+ | \----- Csa02g061860.1 (72) | | /------------------------------------ Csa06g005470.1 (3) | | | | /----- Csa16g057110.1 (8) | | /------------76-----------+ | | | \----- Csa12g022440.1 (42) | | | | | | /----- Csa11g019080.1 (13) | /-50-+ | /-100+ | | | | | \----- Csa11g019070.1 (28) | | | | /-100+ | | | | | \---------- Csa17g016820.1 (61) | | | | | /-100+ | | | /--78-+ /----- Csa16g055760.1 (23) | | | | | | | /-100+ | | | \-76-+ | | | \----- Csa07g064370.1 (76) | | | | | \-100+ | | | | /-66-+ \---------- Csa11g083670.1 (35) | | | | | | | | | | | | /----- Csa06g038270.1 (32) | | | |-100+ \-------76------+ | | | | | \----- Csa05g092310.1 (71) | | | | | | | | | \-------------------------- Csa16g041380.1 (22) | | | | | | | \------------------------------- Csa06g054060.1 (70) | | | | | | /----- Csa18g020670.1 (5) | | /-100+ /------100------+ | | | | | \----- Csa05g021640.1 (59) | | | | | | | | | | /--------------- Csa19g033650.1 (7) | | | |---------70--------+ | | | | | | | /---------- Csa11g097420.1 (33) | | | | | | | | | | | | |-51-+ /----- Csa02g051510.1 (54) | | | | \--76-+ \-56-+ | | | | | \----- Csa05g002870.1 (58) | | | | | | | | | | /----- Csa18g022000.1 (40) | | | | \---100---+ | | | | \----- Csa11g082690.1 (53) | | | | | | | |----------------------------------------- Csa19g048440.1 (16) | | | | | | | |----------------------------------------- Csa20g026950.1 (18) | | | | | | | \----------------------------------------- Csa17g088380.1 (36) | \-100-+ | | /----- Csa05g014000.1 (4) | | /---100---+ /-100+ | | \----- Csa04g053240.1 (67) | | | | | | | /-100-+ /---------- Csa09g065810.1 (15) | | | | | | | | | | \-100+ /----- Csa06g029500.1 (24) | | | | \-82-+ | | | | \----- Csa04g041170.1 (29) | | | | | | | /-71-+ /----- Csa02g075520.1 (9) | | | | | /-59-+ | | | | | | \----- Csa11g103760.1 (10) | | | | | /-100+ | | | | | | \---------- Csa18g040290.1 (62) | | | | | | | | | | \-100-+ /----- Csa10g003930.1 (41) | | | | | /-50-+ | | | | | | \----- Csa12g004190.1 (60) | | \--------100--------+ \-100+ | | | \---------- Csa11g004440.1 (47) | | | | | | /---------- Csa07g015990.1 (12) | | | | | | | /-100+ /----- Csa05g036990.1 (50) | | | | \-93-+ --100+ | | | \----- Csa16g016570.1 (55) | | | | | | \----72----+ /----- Csa18g033410.1 (27) | | | /-91-+ | | | | \----- Csa11g094020.1 (39) | | \-100+ | | \---------- Csa02g067000.1 (30) | | | | /---------- Csa06g028810.1 (26) | | | | | /-100+ /----- Csa04g040400.1 (52) | | | \-92-+ | | | \----- Csa09g064030.1 (63) | | | | \--------------------79-------------------+ /----- Csa06g047660.1 (31) | | /-60-+ | | | \----- Csa05g009930.1 (68) | \-100+ | \---------- Csa04g056170.1 (69) | | /----- Csa03g019870.1 (19) | /-88-+ | | \----- Csa14g020190.1 (51) \------------------------100------------------------+ \---------- Csa17g021650.1 (49) Root part of tree: /------------------------------------------------------------------- Csa07g058830.1 (1) | |------------------------------------------------------------------- Csa16g049360.1 (43) + | /--------------------------------- (141) \----------------57---------------+ \--------------------------------- Csa09g093970.1 (44) |