PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP5228
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Subtree rooted at node 114: /-------------------------- Sobic.002G182701.1.p [Sorghum bicolor] (2) | | /---------- Pahal.B02509.1 [Panicum hallii] (3) | | | /-100+ /----- Pavir.2NG307100.1.p [Panicum virgatum] (54) /-98-+ | \-100+ | | | \----- Pavir.2KG327500.1.p [Panicum virgatum] (60) | | /--93-+ | | | | /----- Sevir.2G194400.1.p [Setaria viridis] (15) | | | \---100---+ | \-94-+ \----- Seita.2G186800.1.p [Setaria italica] (41) | | | \--------------------- Do011026.1 [Dichanthelium oligosanthes] (48) /-100+ | | /----- Zjn_sc00018.1.g05750.1.sm.mk [Zoysia japonica] (10) | | /-72-+ | | | \----- Zmw_sc00180.1.g00450.1 [Zoysia matrella] (20) | | /-100+ | | | | /----- Zmw_sc02496.1.g00090.1 [Zoysia matrella] (34) | | | \-100+ /-93-+ \------100------+ \----- Zpz_sc00511.1.g00270.1.sm.mk [Zoysia pacifica] (39) | | | | | \--------------- Oropetium_20150105_05911A [Oropetium thomaeum] (19) | | | | /----- Bradi4g28883.1.p [Brachypodium distachyon] (4) | | /-100+ | | | \----- Brast05G108300.1.p [Brachypodium stacei] (37) | \------------90-----------+ | \---------- LPERR09G05130.1 [Leersia perrieri] (13) | | /----- GSMUA_Achr9P25450_001 [Musa acuminata] (14) | /-100+ /-94-+ | \----- GSMUA_Achr6P29730_001 [Musa acuminata] (58) | | /-100+ | | | \---------- XP_010935456.1 [Elaeis guineensis] (22) | | /-------63------+ | | | | /----- PEQU_11163 [Phalaenopsis equestris] (27) | | | \----97---+ | | | \----- Spipo2G0051500 [Spirodela polyrhiza] (56) | | | | | | /----- PEQU_06169 [Phalaenopsis equestris] (17) | | | /-99-+ | | | | \----- PEQU_14392 [Phalaenopsis equestris] (43) | \----85---+ /-------90------+ | | | \---------- PEQU_11792 [Phalaenopsis equestris] (18) | | | | | | /----- XP_010913026.1 [Elaeis guineensis] (28) | | | /-100+ | | | | \----- PDK_30s671651g002 [Phoenix dactylifera] (59) | | | /-100+ | \-82-+ | \---------- XP_010924994.1 [Elaeis guineensis] (33) | | /-100-+ | | | \--------------- GSMUA_Achr3P25850_001 [Musa acuminata] (52) | |-86-+ /--99-+ | \--------------------- XP_010913035.1 [Elaeis guineensis] (36) | | | | | \-------------------------- Spipo7G0016700 [Spirodela polyrhiza] (38) | | | | /----- Pavir.6NG119800.1.p [Panicum virgatum] (5) | | /-95-+ | | | \----- Pahal.F02723.1 [Panicum hallii] (30) | | /----88----+ | | | \---------- Do014979.1 [Dichanthelium oligosanthes] (21) | | | | | | /---------- AC217910.3_FGP006 [Zea mays] (40) | | /-89-+ | | | | | /-100+ /----- GRMZM2G079768_P01 [Zea mays] (42) | | | | | \-100+ | | | \-100-+ \----- GRMZM2G095982_P01 [Zea mays] (47) | | /-86-+ | | | | | \--------------- Sobic.007G122600.1.p [Sorghum bicolor] (51) | | | | | | | | /----- Seita.6G138500.1.p [Setaria italica] (11) | | | \---------100--------+ | | | \----- Sevir.6G143600.1.p [Setaria viridis] (24) | | | | \------94------+ /----- Zpz_sc00392.1.g00260.1.am.mk [Zoysia pacifica] (6) | | /-100+ | | | \----- Zjn_sc00015.1.g00350.1.am.mk [Zoysia japonica] (35) | | | /-100+ | /-100+---------- Zmw_sc02607.1.g00080.1 [Zoysia matrella] (7) | | | | | | | | | \---------- Zmw_sc00319.1.g00140.1 [Zoysia matrella] (57) | | \-------73------+ | | | /----- 462943921 [Eragrostis tef] (23) | | \----87---+ | | \----- Pavir.J298200.1.p [Panicum virgatum] (45) | | | | /----- ORGLA08G0122300.1 [Oryza glaberrima] (8) | | /-100+ | | | \----- OBART08G13930.1 [Oryza barthii] (61) | | /-99-+ | | | | /----- ONIVA08G14880.1 [Oryza nivara] (44) | | | \-99-+ | | /-100-+ \----- BGIOSGA028630-PA [Oryza sativa indica] (46) | | | | /-100+ | | | /----- ORUFI08G15760.1 [Oryza rufipogon] (16) | | | | \---100---+ | | | /-100+ \----- LOC_Os08g31080.1 [Oryza sativa japonica] (49) | | | | | | | | | |--------------------- OGLUM08G14700.1 [Oryza glumaepatula] (9) | | | /-100+ | | | | | | \--------------------- KN540177.1_FGP004 [Oryza longistaminata] (53) | | | | | | | | /-72-+ \-------------------------- OPUNC08G12580.1 [Oryza punctata] (26) --91-+ | | | | | | \------100------+ \------------------------------- OB08G21740.1 [Oryza brachyantha] (29) | | | | | \------------------------------------ LPERR08G11550.1 [Leersia perrieri] (31) | | | | /----- Bradi3g35280.1.p [Brachypodium distachyon] (50) | \------------------------100------------------------+ | \----- Brast03G221100.1.p [Brachypodium stacei] (55) | \-------------------------------------------------------------- TRAES3BF113300120CFD_t1 [Triticum aestivum] (32) Root part of tree: /------------------------------------------------------------------- EMT03825 [Aegilops tauschii] (1) | |------------------------------------------------------------------- TRIUR3_30753-P1 [Triticum urartu] (12) + | /--------------------------------- (114) \----------------90---------------+ \--------------------------------- MLOC_81908.1 [Hordeum vulgare] (25) |