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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP3950
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Subtree rooted at node 116: /--------------- GRMZM2G346920_P01 [Zea mays] (3) | | /----- Sevir.6G192200.1.p [Setaria viridis] (21) /--54-+ /-100+ | | | \----- Seita.6G185900.1.p [Setaria italica] (33) | \-78-+ | \---------- Sobic.007G160400.1.p [Sorghum bicolor] (43) | /-100+ /----- Pavir.6NG277200.1.p [Panicum virgatum] (37) | | /-100+ | | | \----- Pavir.6NG285900.1.p [Panicum virgatum] (54) | | /-53-+ | | | \---------- Pavir.6KG318100.1.p [Panicum virgatum] (47) | \-100-+ | \--------------- Pahal.F01666.1 [Panicum hallii] (56) /--------------100-------------+ | | /----- Zmw_sc00136.1.g00550.1 [Zoysia matrella] (5) | | /-51-+ | | | \----- Zjn_sc00106.1.g00890.1.am.mk [Zoysia japonica] (18) | | /-100+ | | | | /----- Zpz_sc04211.1.g00010.1.am.mk [Zoysia pacifica] (59) | | | \-100+ | \----100---+ \----- Zmw_sc00322.1.g00280.1 [Zoysia matrella] (67) | | | \--------------- Oropetium_20150105_20378A [Oropetium thomaeum] (45) | | /---------- LOC_Os09g29130.1 [Oryza sativa japonica] (6) | | | |---------- OMERI09G10380.1 [Oryza meridionalis] (16) | | | |---------- ORUFI09G14280.1 [Oryza rufipogon] (17) | | | | /----- ONIVA09G13780.1 [Oryza nivara] (22) | /-88-+-99-+ | | | \----- BGIOSGA029617-PA [Oryza sativa indica] (32) | | | | | |---------- ORGLA09G0100600.1 [Oryza glaberrima] (42) | | | | /--86-+ |---------- LPERR09G09620.1 [Leersia perrieri] (61) | | | | | | | \---------- OGLUM09G13770.1 [Oryza glumaepatula] (69) | /-----------93-----------+ | | | | \--------------- OPUNC09G11630.1 [Oryza punctata] (23) | | | | | \--------------------- OB09G19830.1 [Oryza brachyantha] (51) | | | | /---------- GSMUA_Achr3P20390_001 [Musa acuminata] (7) | | | | | /-64-+ /----- GSMUA_Achr7P19060_001 [Musa acuminata] (26) | | | \-84-+ | | /--88-+ \----- PEQU_07241 [Phalaenopsis equestris] (31) | | | | | | /-71-+ \--------------- GSMUA_Achr10P30290_001 [Musa acuminata] (15) | | | | | | | \--------------------- GSMUA_Achr6P02170_001 [Musa acuminata] (29) | | /-82-+ /-51-+ | | | /----- GSMUA_AchrUn_randomP03390_001 [Musa acuminata] (30) | | | | \---------96---------+ | | | /-79-+ \----- GSMUA_Achr5P05500_001 [Musa acuminata] (50) | | | | | | | | | \------------------------------- XP_010939727.1 [Elaeis guineensis] (46) | | | /-53-+ | | | | | /----- Aco002750.1 [Ananas comosus] (11) | | | | \--------------94--------------+ | | |-63-+ \----- Aco001263.1 [Ananas comosus] (44) | | | | | | | | /----- Zosma450g00040.1 [Zostera marina] (24) | | | \----------------100----------------+ | | | \----- Zosma6g02050.1 [Zostera marina] (55) | | | | | | /---------- Zmw_sc00591.1.g00300.1 [Zoysia matrella] (8) | | | | | | | /-100+ /----- Zjn_sc00018.1.g03080.1.am.mk [Zoysia japonica] (9) | | | | \-100+ | | |--------------100-------------+ \----- Zpz_sc01405.1.g00120.1.am.mk [Zoysia pacifica] (34) | | | | | | /--97-+ \--------------- Zmw_sc00549.1.g00200.1 [Zoysia matrella] (20) | | | | | | | | /----- MLOC_65058.1 [Hordeum vulgare] (12) | | | | /-100+ | | | | | \----- Traes_5BL_93F0F3F5D.1 [Triticum aestivum] (27) | | | |-----------------64----------------+ | | | | | /----- Bradi4g32580.1.p [Brachypodium distachyon] (41) | | | | \-93-+ | | | | \----- Brast05G152000.1.p [Brachypodium stacei] (49) | | | | | | | | /--------------- Oropetium_20150105_05637A [Oropetium thomaeum] (14) | | | | | | | | | | /----- Zjn_sc00039.1.g00740.1.am.mk [Zoysia japonica] (38) --100+ | | | /-100-+ /-100+ | | | | | | | \----- Zmw_sc04183.1.g00100.1 [Zoysia matrella] (48) | | | | | \-100+ | | | | /-73-+ \---------- Zpz_sc00119.1.g00380.1.am.mk [Zoysia pacifica] (65) | | | | | | | | | | | | /----- Sobic.002G231100.1.p [Sorghum bicolor] (40) | | | | | \-------82------+ | \-68-+ | | \----- GRMZM2G389379_P01 [Zea mays] (68) | | | | | | | | /----- Pavir.2KG368100.1.p [Panicum virgatum] (35) | | | |---------80---------+ | | |---------53--------+ \----- Pavir.2NG362800.1.p [Panicum virgatum] (53) | | | | | | | |-------------------------- Do019488.1 [Dichanthelium oligosanthes] (39) | | | | | | | |-------------------------- Pahal.B03141.1 [Panicum hallii] (52) | | | | | | | | /----- Sevir.2G246600.1.p [Setaria viridis] (57) | | | \---------100--------+ | | | \----- Seita.2G236300.1.p [Setaria italica] (66) | | | | | | /----- XP_010912536.1 [Elaeis guineensis] (25) | | \-------------------69-------------------+ | | \----- Spipo4G0101000 [Spirodela polyrhiza] (58) | | | | /----- Brast03G256800.1.p [Brachypodium stacei] (36) | \----------------------100---------------------+ | \----- Bradi3g38430.1.p [Brachypodium distachyon] (60) | | /----- PH01004504G0130 [Phyllostachys heterocycla] (10) |---------------------------96---------------------------+ | \----- OB08G25340.1 [Oryza brachyantha] (13) | \-------------------------------------------------------------- LPERR08G15140.1 [Leersia perrieri] (63) Root part of tree: /------------------------------------------------------------------- ORGLA08G0158100.1 [Oryza glaberrima] (1) | |------------------------------------------------------------------- ONIVA08G20290.1 [Oryza nivara] (19) | |------------------------------------------------------------------- OGLUM08G19140.1 [Oryza glumaepatula] (28) | + /--------------------------------- (116) |---------------100---------------+ | \--------------------------------- OPUNC08G16150.1 [Oryza punctata] (64) | | /--------------------------------- BGIOSGA026798-PA [Oryza sativa indica] (2) | | \----------------93---------------+--------------------------------- LOC_Os08g37400.1 [Oryza sativa japonica] (4) | \--------------------------------- ORUFI08G20390.1 [Oryza rufipogon] (62) |