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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2013
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/------------------------------------------------------------------- PDK_30s1058241g001 [Phoenix dactylifera] (1) | |------------------------------------------------------------------- XP_010933179.1 [Elaeis guineensis] (81) | | /---------- Zpz_sc00418.1.g00380.1.sm.mk [Zoysia pacifica] (2) | | | /-100+ /----- Zmw_sc02266.1.g00080.1 [Zoysia matrella] (29) | | \-100+ | | \----- Zjn_sc00007.1.g00390.1.sm.mk [Zoysia japonica] (43) | | | /--93-+ /----- Zjn_sc00066.1.g00390.1.am.mk [Zoysia japonica] (42) | | | /-100+ | | | | \----- Zmw_sc04154.1.g00020.1 [Zoysia matrella] (48) | | \-100+ | /-88-+ | /----- Zmw_sc04540.1.g00030.1 [Zoysia matrella] (72) | | | \-100+ | | | \----- Zpz_sc00911.1.g00260.1.sm.mk [Zoysia pacifica] (75) | | | | | \--------------------- Oropetium_20150105_04704A [Oropetium thomaeum] (58) | | | /-70-+ /----- Pavir.1KG549600.1.p [Panicum virgatum] (25) | | | /-93-+ | | | | \----- Pavir.1NG550900.1.p [Panicum virgatum] (82) | | | /-100+ | | | | \---------- Pahal.A03950.1 [Panicum hallii] (51) | | \----100---+ | | | /----- Sevir.1G379400.1.p [Setaria viridis] (41) | | \---100---+ | | \----- Seita.1G372800.1.p [Setaria italica] (49) | | | | /---------- Sobic.004G351700.1.p [Sorghum bicolor] (4) | | | | |---------100--------+ /----- GRMZM2G038291_P01 [Zea mays] (18) | | \-100+ | | \----- GRMZM2G140033_P01 [Zea mays] (26) | | | | /----- ONIVA02G40650.1 [Oryza nivara] (8) | | | | /-55-+ |----- LOC_Os02g57790.1 [Oryza sativa japonica] (24) | | | | | | | |----- ORGLA02G0331100.1 [Oryza glaberrima] (35) | | | /-100+ | | | | |----- BGIOSGA005334-PA [Oryza sativa indica] (52) | | | | | | | | | |----- OGLUM02G39020.1 [Oryza glumaepatula] (60) | | | /-72-+ | | | | | | \----- ORUFI02G39400.1 [Oryza rufipogon] (73) | | | | | | | | /--97-+ \---------- OPUNC02G35060.1 [Oryza punctata] (77) | | | | | | | | /-100+ \--------------- OMERI02G35680.1 [Oryza meridionalis] (47) | /-97-+ | | | | | | | | \--------------------- LPERR02G31310.1 [Leersia perrieri] (17) | | | | | | | | | | /----- Traes_6DL_88DFCF552.1 [Triticum aestivum] (9) | | | | |---------100--------+ | | | \-50-+ \----- Traes_6AL_3DEF1B023.1 [Triticum aestivum] (19) | | | | | | | |-------------------------- Brast04G053900.1.p [Brachypodium stacei] (13) | | | | | | | | /----- PH01000021G0290 [Phyllostachys heterocycla] (39) | | | \---------100--------+ | /-91-+ | \----- PH01000140G0830 [Phyllostachys heterocycla] (55) | | | | | | | \------------------------------------ MLOC_29808.1 [Hordeum vulgare] (85) | | | | | | /----- Sevir.4G304100.1.p [Setaria viridis] (6) | | | /-100+ | | | | \----- Seita.4G291500.1.p [Setaria italica] (69) | | | /-100+ | | | | | /----- Pahal.D00284.1 [Panicum hallii] (20) | | | | \-100+ | | \-----------100-----------+ \----- Pavir.5NG224600.1.p [Panicum virgatum] (78) | | | | | | /----- GRMZM2G307402_P01 [Zea mays] (27) | | \---100---+ + | \----- Sobic.010G279600.1.p [Sorghum bicolor] (40) | | | | /---------- ONIVA04G01780.1 [Oryza nivara] (3) | | | | | |---------- BGIOSGA015871-PA [Oryza sativa indica] (31) | | /-69-+ | | | | /----- ORGLA04G0015300.1 [Oryza glaberrima] (33) | | | \-94-+ | /--74-+ | \----- OBART04G02090.1 [Oryza barthii] (59) | | | | | | | /--59-+ /----- OGLUM08G21100.1 [Oryza glumaepatula] (16) | | | | |----97---+ | | | | | \----- OPUNC04G02120.1 [Oryza punctata] (28) | | | | | | | | /-86-+ | /----- ORUFI04G02810.1 [Oryza rufipogon] (23) | | | | | \---100---+ | | | | | \----- LOC_Os04g08060.1 [Oryza sativa japonica] (37) | | | /-100+ | | | | | | \--------------------- OMERI04G02090.1 [Oryza meridionalis] (68) | | | | | | | | | \-------------------------- LPERR04G01360.1 [Leersia perrieri] (62) | | | /-94-+ | | | | | /---------- Traes_2BS_705DDDDC8.2 [Triticum aestivum] (10) | | | | | | | | | | \---------98---------+ /----- Bradi5g00530.2.p [Brachypodium distachyon] (38) | | | /-97-+ \-100+ | | | | | \----- Brast09G002000.1.p [Brachypodium stacei] (84) | /-60-+ | | | | | | | | | /----- PH01001035G0240 [Phyllostachys heterocycla] (57) | | | | | \--------------100-------------+ | | | \-100+ \----- PH01001442G0040 [Phyllostachys heterocycla] (61) | | | | | | | | /--------------- Oropetium_20150105_25655A [Oropetium thomaeum] (15) | | | | | | | | | | /----- Zjn_sc00057.1.g00250.1.am.mk [Zoysia japonica] (34) | | | \-----------100-----------+ /-100+ | | | | | \----- Zmw_sc00714.1.g00130.1 [Zoysia matrella] (53) | | | \-100+ | | | \---------- Zpz_sc01679.1.g00020.1.am.mk [Zoysia pacifica] (66) | | | | | | /----- Aco008896.1 [Ananas comosus] (12) | | | /-98-+ | | | | \----- Aco010240.1 [Ananas comosus] (32) | | | /-55-+ | | | | | /----- Aco009157.1 [Ananas comosus] (76) | | | | \-100+ | | \-----------------72-----------------+ \----- Aco021560.1 [Ananas comosus] (80) | | | | | \--------------- PEQU_05713 [Phalaenopsis equestris] (44) | | | | /----- PEQU_14971 [Phalaenopsis equestris] (5) | | /-100+ | | | \----- PEQU_14970 [Phalaenopsis equestris] (36) | | /-54-+ | | | \---------- PEQU_14967 [Phalaenopsis equestris] (65) | | /-100-+ | | | \--------------- PEQU_14966 [Phalaenopsis equestris] (64) | |-----------------87----------------+ | | \--------------------- PEQU_17487 [Phalaenopsis equestris] (50) | /-85-+ | | |--------------------------------------------------------- GSMUA_Achr1P01260_001 [Musa acuminata] (7) | | | | | | /----- GSMUA_AchrUn_randomP07580_001 [Musa acuminata] (11) | | | /-63-+ | | | | \----- GSMUA_Achr1P06720_001 [Musa acuminata] (79) | | | /-87-+ | | | | \---------- GSMUA_Achr10P06730_001 [Musa acuminata] (30) | | | | | | | | /----- XP_010940535.1 [Elaeis guineensis] (22) | | | | /-100+ | | | | | \----- PDK_30s669462g005 [Phoenix dactylifera] (63) | | |--------------------70-------------------+-100+ | | | | | /----- PDK_30s758801g007 [Phoenix dactylifera] (67) | | | | \-97-+ | | | | \----- XP_010935821.1 [Elaeis guineensis] (71) | | | | \-82-+ | \--------------- Spipo11G0058400 [Spirodela polyrhiza] (45) | | | |--------------------------------------------------------- PEQU_20819 [Phalaenopsis equestris] (14) | | | | /----- GSMUA_Achr1P03310_001 [Musa acuminata] (21) | |-------------------------76------------------------+ | | \----- Zosma31g00150.1 [Zostera marina] (54) | | | | /----- GSMUA_Achr11P02250_001 [Musa acuminata] (46) | | /-94-+ | | | \----- GSMUA_Achr8P12900_001 [Musa acuminata] (83) | |----------------------91----------------------+ | | \---------- GSMUA_Achr11P21920_001 [Musa acuminata] (74) | | | \--------------------------------------------------------- Zosma37g01300.1 [Zostera marina] (70) | \-------------------------------------------------------------- XP_010910785.1 [Elaeis guineensis] (56) |