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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2012
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 144: /--------------- Traes_6BS_BD894AD26.1 [Triticum aestivum] (2) | | /----- Traes_6DS_F95C12EBB.1 [Triticum aestivum] (9) /--98-+ /-100+ | | | \----- EMT32630 [Aegilops tauschii] (51) | \-97-+ | | /----- Traes_6AS_10D92215D.2 [Triticum aestivum] (19) /-100+ \-100+ | | \----- TRIUR3_28948-P1 [Triticum urartu] (72) | | /-100+ \--------------------- MLOC_66152.2 [Hordeum vulgare] (78) | | | | /----- Brast04G290300.1.p [Brachypodium stacei] (63) | \---------100--------+ | \----- Bradi3g04920.1.p [Brachypodium distachyon] (73) | | /----- PH01000093G0670 [Phyllostachys heterocycla] (4) |-----------100-----------+ | \----- PH01000227G0020 [Phyllostachys heterocycla] (34) | | /----- Pavir.1KG067400.1.p [Panicum virgatum] (6) | /-97-+ | | \----- Pavir.1NG060500.1.p [Panicum virgatum] (62) | /-100+ /------51------+ | | /----- Pahal.J01514.1 [Panicum hallii] (20) | | | \-100+ | | /-100-+ \----- Pahal.A00415.1 [Panicum hallii] (37) | | | | | | | | /----- Sevir.1G075700.1.p [Setaria viridis] (50) | | | \---100---+ | | /-100+ \----- Seita.1G077200.1.p [Setaria italica] (54) | | | | | | | | /----- GRMZM2G028980_P01 [Zea mays] (8) | | | \------100------+ | | | \----- Sobic.004G051900.1.p [Sorghum bicolor] (58) | | | | | | /----- Zjn_sc00045.1.g03490.1.am.mkhc [Zoysia japonica] (13) | \-100+ /-100+ | | | \----- Zmw_sc03225.1.g00090.1 [Zoysia matrella] (76) | | /-65-+ | | | \---------- 462865345 [Eragrostis tef] (29) | | /--65-+ | | | \--------------- 462954133 [Eragrostis tef] (65) | \-100+ | \--------------------- Oropetium_20150105_14416A [Oropetium thomaeum] (25) /-100-+ | | /--------------- ORGLA02G0045800.1 [Oryza glaberrima] (3) | | | | | | /----- LOC_Os02g06910.1 [Oryza sativa japonica] (7) | | | | | | | /-100+----- ORUFI02G05060.1 [Oryza rufipogon] (14) | | | | | | | /-100-+-100+ \----- BGIOSGA007604-PA [Oryza sativa indica] (79) | | | | | | | | | \---------- ONIVA02G05150.1 [Oryza nivara] (68) | | | | | | /-70-+ |--------------- OGLUM02G04770.1 [Oryza glumaepatula] (52) | | | | | | | | | \--------------- OBART02G04960.1 [Oryza barthii] (81) | | /-100+ | | | | | \--------------------- KN539680.1_FGP001 [Oryza longistaminata] (21) | | | | | | /-100+ \-------------------------- OMERI02G05780.1 [Oryza meridionalis] (43) | | | | | | /-91-+ \------------------------------- OPUNC02G04120.1 [Oryza punctata] (83) | | | | | \-100+ \------------------------------------ OB02G14210.1 [Oryza brachyantha] (70) | | | \----------------------------------------- LPERR02G04280.1 [Leersia perrieri] (12) | | /---------- ORUFI06G26570.1 [Oryza rufipogon] (5) | | | |---------- KN539163.1_FGP009 [Oryza longistaminata] (41) /-96-+ | | | |---------- LOC_Os06g46410.1 [Oryza sativa japonica] (55) | | | | | /-100+---------- OBART06G24660.1 [Oryza barthii] (61) | | | | | | | | /----- BGIOSGA020682-PA [Oryza sativa indica] (66) | | | |-100+ | | /--97-+ | \----- ONIVA02G35510.1 [Oryza nivara] (71) | | | | | | | | | \---------- OGLUM06G26000.1 [Oryza glumaepatula] (82) | | /-100+ | | | | | \--------------- OMERI06G24880.1 [Oryza meridionalis] (45) | | | | | | /-92-+ \--------------------- OPUNC06G22430.1 [Oryza punctata] (60) | | | | | | /---100---+ \-------------------------- OB06G32420.1 [Oryza brachyantha] (64) | | | | | | | \------------------------------- LPERR06G20540.1 [Leersia perrieri] (30) | | | | | | /----- Brast07G208400.1.p [Brachypodium stacei] (10) | | | /---------100--------+ | | | | \----- Bradi1g32547.1.p [Brachypodium distachyon] (33) | | | | | | | | /---------- Traes_7BL_66296695F.1 [Triticum aestivum] (15) | | | | | | | | /-100+ /-100+ /----- TRIUR3_32597-P1 [Triticum urartu] (36) | | | | | | \-95-+ | | | | | /-100-+ \----- Traes_7AL_1415D04BF.1 [Triticum aestivum] (40) | \----99----+ | | | | | | | \-100+ \--------------- Traes_7DL_C89614A4D.1 [Triticum aestivum] (46) /-92-+ | /-98-+ | | | | | | \--------------------- MLOC_58330.2 [Hordeum vulgare] (18) | | | | | | | | | | /----- PH01000483G0220 [Phyllostachys heterocycla] (22) | | | | \-----------100-----------+ | | | | \----- PH01001555G0390 [Phyllostachys heterocycla] (28) | | | | | | | | /----- Pavir.4NG303000.1.p [Panicum virgatum] (11) | | | | /-100+ | | | | | \----- Pavir.4KG408000.1.p [Panicum virgatum] (85) | | | | /-100+ | | \-61-+ | \---------- Pahal.D00507.1 [Panicum hallii] (42) | | | /-100-+ | | | | | /----- Sevir.4G275100.1.p [Setaria viridis] (17) | | | | \---100---+ | | | /-100+ \----- Seita.4G262300.1.p [Setaria italica] (47) --92-+ | | | | | | | | | /----- GRMZM2G035405_P02 [Zea mays] (23) | | | | \------100------+ | | | | \----- Sobic.010G229000.1.p [Sorghum bicolor] (56) | | | | | | \---100---+ /----- 462860570 [Eragrostis tef] (26) | | | /-100+ | | | | \----- 462860572 [Eragrostis tef] (39) | | | /-100+ | | | | \---------- 462958810 [Eragrostis tef] (38) | | \----100---+ | | \--------------- Oropetium_20150105_15589A [Oropetium thomaeum] (31) | | | \--------------------------------------------------------- GSMUA_Achr1P08230_001 [Musa acuminata] (77) | \-------------------------------------------------------------- Aco008426.1 [Ananas comosus] (59) Root part of tree: /------------------------------------------------------------------- GSMUA_Achr6P19850_001 [Musa acuminata] (1) | | /-------- GSMUA_Achr5P00590_001 [Musa acuminata] (24) |----------------------------100---------------------------+ | \-------- GSMUA_Achr11P18520_001 [Musa acuminata] (32) | | /-------- (144) | /--------------------92-------------------+ | | \-------- Aco014831.1 [Ananas comosus] (35) | | | | /----------------- GSMUA_Achr5P02450_001 [Musa acuminata] (27) | | | + | /--100--+ /-------- PDK_30s840681g002 [Phoenix dactylifera] (53) | | | \---92---+ | | | \-------- XP_010923656.1 [Elaeis guineensis] (74) | /---76---+ /---66--+ | | | | | /-------- Spipo13G0044400 [Spirodela polyrhiza] (44) | | | | \-------69-------+ | | | /---69---+ \-------- Zosma39g00250.1 [Zostera marina] (49) | | | | | | | | | \--------------------------------- PEQU_03892 [Phalaenopsis equestris] (69) | | | | | | | |------------------------------------------ PDK_30s1185041g002 [Phoenix dactylifera] (48) | | \---69--+ \---97--+ | /-------- PDK_30s841991g001 [Phoenix dactylifera] (57) | | /---100--+ | | | \-------- XP_010908734.1 [Elaeis guineensis] (75) | \-----------64-----------+ | \----------------- XP_010941526.1 [Elaeis guineensis] (67) | | /-------- GSMUA_Achr5P26580_001 [Musa acuminata] (16) | /---100--+ | | \-------- GSMUA_Achr11P25770_001 [Musa acuminata] (84) \--------------------99-------------------+ \----------------- GSMUA_Achr3P23290_001 [Musa acuminata] (80) |