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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2005
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 156: /---------- Zjn_sc00006.1.g03280.1.sm.mk [Zoysia japonica] (3) | |---------- Zmw_sc01908.1.g00010.1 [Zoysia matrella] (15) /-61-+ | | /----- Zpz_sc00239.1.g00180.1.sm.mk [Zoysia pacifica] (34) | \-100+ /-100-+ \----- Zmw_sc00968.1.g00170.1 [Zoysia matrella] (83) | | | | /----- Zpz_sc00239.1.g00170.1.am.mk [Zoysia pacifica] (10) | \---100---+ | \----- Zmw_sc00968.1.g00160.1 [Zoysia matrella] (30) /-85-+ | | /----- Zpz_sc00242.1.g00250.1.sm.mk [Zoysia pacifica] (61) | | /-67-+ | | | \----- Zmw_sc01858.1.g00080.1 [Zoysia matrella] (72) /-83-+ \----100---+ | | \---------- Zjn_sc00058.1.g02750.1.sm.mk [Zoysia japonica] (67) | | /-64-+ \-------------------------- Oropetium_20150105_21450A [Oropetium thomaeum] (31) | | | | /----- 462922698 [Eragrostis tef] (29) | \-----------100-----------+ | \----- 462939026 [Eragrostis tef] (85) | /---------100--------+ /----- Pavir.7KG312700.1.p [Panicum virgatum] (20) | | /-100+ | | | \----- Pahal.G00185.1 [Panicum hallii] (44) | | /-100+ | | | | /----- Sevir.7G106300.1.p [Setaria viridis] (76) | | | \-100+ | \---------100--------+ \----- Seita.7G098400.1.p [Setaria italica] (77) | | | | /----- Sobic.006G080500.1.p [Sorghum bicolor] (32) | \---100---+ | \----- GRMZM2G147685_P01 [Zea mays] (88) | | /---------- Sobic.007G025200.1.p [Sorghum bicolor] (5) | | | /-100+ /----- Sobic.007G025300.1.p [Sorghum bicolor] (25) | | \-100+ | | \----- GRMZM2G481280_P01 [Zea mays] (90) | /---------95---------+ | | | /----- Sobic.004G171500.1.p [Sorghum bicolor] (45) | | \---100---+ | | \----- Sobic.004G171600.1.p [Sorghum bicolor] (81) | | | | /---------- Pahal.A02070.1 [Panicum hallii] (6) | | | | | /-100+ /----- Pavir.1KG325000.1.p [Panicum virgatum] (58) | | | \-100+ | | | \----- Pavir.1NG298900.1.p [Panicum virgatum] (64) | | /-100-+ | /-100+ | | /----- Seita.1G188600.1.p [Setaria italica] (17) | | | | \---100---+ | | | /-97-+ \----- Sevir.1G192500.1.p [Setaria viridis] (46) | | | | | | | | /-70-+ \--------------------- Do010032.1 [Dichanthelium oligosanthes] (9) | | | | | | | | | \-------------------------- Do027698.1 [Dichanthelium oligosanthes] (53) | | | | | | | | /----- Sevir.1G192300.1.p [Setaria viridis] (19) | | | | /-100+ | | \-100+ | \----- Seita.1G188300.1.p [Setaria italica] (52) | | | /----70----+ | | | | | /----- Sevir.1G192200.1.p [Setaria viridis] (41) | | | | \-100+ | | | | \----- Seita.1G188200.1.p [Setaria italica] (55) | | | | | /-98-+ \---100---+ /----- Pavir.1NG298700.1.p [Panicum virgatum] (66) /-95-+ | | | /-100+ | | | | | | \----- Pavir.1NG298500.1.p [Panicum virgatum] (73) | | | | | /-70-+ | | | | | | \---------- Pahal.A02069.1 [Panicum hallii] (80) | | | | \-100-+ | | | | | /----- Pavir.1KG324900.1.p [Panicum virgatum] (69) | | | | \---100---+ | | | | \----- Pavir.1KG324800.1.p [Panicum virgatum] (70) | | | | | | | | /-------------------------- Oropetium_20150105_11404A [Oropetium thomaeum] (13) | | | | | | | | | | /----- Zmw_sc00318.1.g00130.1 [Zoysia matrella] (33) | | | | | /-100+ | | | | | | \----- Zjn_sc00020.1.g01310.1.am.mk [Zoysia japonica] (75) | | | \------100-----+ /-88-+ | | | | | \---------- Zpz_sc02539.1.g00100.1.am.mk [Zoysia pacifica] (36) | | | | /-100-+ | | | | | \--------------- Zmw_sc01421.1.g00190.1 [Zoysia matrella] (49) | | | \-89-+ | | | \--------------------- Oropetium_20150105_11403A [Oropetium thomaeum] (51) | | | | | /--99-+ /---------- Brast04G176700.1.p [Brachypodium stacei] (11) | | | | | | | | | /-100+ /----- Bradi3g45370.2.p [Brachypodium distachyon] (47) | | | | | \-100+ | | | | | \----- Bradi3g45360.2.p [Brachypodium distachyon] (59) | | | | /----100---+ | | | | | | /----- Bradi3g45365.1.p [Brachypodium distachyon] (82) | | | | | \---100---+ | | | | | \----- Brast04G176600.1.p [Brachypodium stacei] (86) | | | | | | | | | | /----- Traes_6BS_C53202201.1 [Triticum aestivum] (23) | | | | /-99-+ /-84-+ | | | | | | | \----- TRIUR3_10631-P1 [Triticum urartu] (39) | | | | | | /-99-+ | | | | | | | \---------- EMT20279 [Aegilops tauschii] (50) --75-+ | | | | | /--99-+ | | | | | | | \--------------- MLOC_44566.1 [Hordeum vulgare] (26) | | | | | \-98-+ | | | | | \--------------------- EMT06122 [Aegilops tauschii] (43) | | | | | | | | | | /----- OB02G27530.1 [Oryza brachyantha] (16) | | | | | /----68---+ | | | \------91------+ | \----- OPUNC02G17910.1 [Oryza punctata] (28) | \-75-+ | | | | | | /----- ORUFI02G21070.1 [Oryza rufipogon] (21) | | | | | | | | | /-100+----- LOC_Os02g34320.1 [Oryza sativa japonica] (48) | | | | | | | | | /-100-+-51-+ \----- BGIOSGA008398-PA [Oryza sativa indica] (60) | | | | | | | | | | | \---------- OGLUM02G20210.1 [Oryza glumaepatula] (65) | | | | | | | \---100---+ |--------------- OBART02G19940.1 [Oryza barthii] (24) | | | | | | | \--------------- ORGLA02G0170900.1 [Oryza glaberrima] (40) | | | | | \--------------------- LPERR02G15950.1 [Leersia perrieri] (79) | | | | /----- PDK_30s737611g001 [Phoenix dactylifera] (8) | | /---100---+ | | | \----- XP_010930934.1 [Elaeis guineensis] (91) | | | | | /-100-+ /---------- GSMUA_Achr9P08780_001 [Musa acuminata] (18) | | | | | | | | \-99-+ /----- Aco003204.1 [Ananas comosus] (56) | \--------------100-------------+ \-83-+ | | \----- Spipo4G0113200 [Spirodela polyrhiza] (62) | | | \--------------------- Zosma2g01070.1 [Zostera marina] (89) | \-------------------------------------------------------------- OB04G19940.1 [Oryza brachyantha] (42) Subtree rooted at node 169: /--------------------------------------------------------- ORGLA04G0098500.1 [Oryza glaberrima] (2) | | /-------------------------- (156) | | | | /----- LPERR04G09540.1 [Leersia perrieri] (12) | | /-89-+ | | | \----- LPERR04G09530.1 [Leersia perrieri] (27) | /-85-+ /-100+ | | | | \---------- LPERR04G09510.1 [Leersia perrieri] (78) | | | /-100-+ | | | | \--------------- OB04G19930.1 [Oryza brachyantha] (37) | /-61-+ \-100+ | | | \--------------------- KN539428.1_FGP004 [Oryza longistaminata] (38) | | | /-74-+ /-73-+ \------------------------------- LPERR04G09550.1 [Leersia perrieri] (7) | | | | | | /-83-+ \------------------------------------ OPUNC04G10810.1 [Oryza punctata] (14) | | | | | | /--71-+ \----------------------------------------- OMERI04G11480.1 [Oryza meridionalis] (71) | | | | | |-66-+ \---------------------------------------------- KN539428.1_FGP006 [Oryza longistaminata] (4) | | | --55-+ | \---------------------------------------------------- BGIOSGA016427-PA [Oryza sativa indica] (68) | | | | /----- ONIVA04G11000.1 [Oryza nivara] (22) | |------------------------100------------------------+ | | \----- OBART04G12880.1 [Oryza barthii] (57) | | | \--------------------------------------------------------- LOC_Os04g35010.1 [Oryza sativa japonica] (35) | \-------------------------------------------------------------- OGLUM04G12510.1 [Oryza glumaepatula] (74) Root part of tree: /------------------------------------------------------------------- ORGLA04G0098400.1 [Oryza glaberrima] (1) | |------------------------------------------------------------------- OBART04G12870.1 [Oryza barthii] (84) | + /---------------------- (169) | /----------82----------+ | | \---------------------- ORUFI04G14020.1 [Oryza rufipogon] (63) \----------92---------+ | /---------------------- BGIOSGA016426-PA [Oryza sativa indica] (54) \----------55----------+ \---------------------- ONIVA04G10990.1 [Oryza nivara] (87) |