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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM965
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 173: /----- Csa13g019630.1 [Camelina sativa] (2) /-70-+ | \----- Neem_2547_f_4 [Azadirachta indica] (98) /--------------100-------------+ | \---------- Rsa1.0_19328.1_g00001.1 [Raphanus sativus] (57) | | /----- Ciclev10005403m [Citrus clementina] (4) | /-100+ | | \----- orange1.1g020146m [Citrus sinensis] (5) |--------------100-------------+ | \---------- Neem_1512_f_4 [Azadirachta indica] (42) | | /----- KFK25540.1 [Arabis alpina] (6) | /-95-+ | | \----- KFK25539.1 [Arabis alpina] (71) | /------89------+ | | | /----- 909257 [Arabidopsis lyrata] (95) | | \-78-+ | | \----- Csa13g015630.1 [Camelina sativa] (97) | | | /-71-+ /----- Bostr.30275s0431.1.p [Boechera stricta] (19) | | | /------94------+ | | | | \----- 676792476 [Sisymbrium irio] (49) | | | | | | \-94-+ /--------------- Rsa1.0_04545.1_g00005.1 [Raphanus sativus] (45) | | | | | /--63-+ | | /----- XP_013615227.1 [Brassica oleracea] (62) | | | \-100+ /-88-+ | | | | | \----- GSBRNA2T00045453001 [Brassica napus] (67) | | | \-100+ |-50-+ | \---------- XP_013618084.1 [Brassica oleracea] (86) | | | | | \------------------------------ Carubv10027643m [Capsella rubella] (82) | | | \------------------------------------ Cagra.2848s0007.1.p [Capsella grandiflora] (39) | | /----- Csa11g098820.1 [Camelina sativa] (7) | /-100+ | | \----- Csa18g035410.1 [Camelina sativa] (30) | /-98-+ | | \---------- Csa02g070060.1 [Camelina sativa] (65) | /-84-+ | | | /----- Cagra.4553s0008.1.p [Capsella grandiflora] (9) | | \---100---+ | /-94-+ \----- Carubv10026734m [Capsella rubella] (66) | | | | | \-------------------- Bostr.26833s0037.1.p [Boechera stricta] (89) |-------94------+ | | /---------- AT5G62020.1 [Arabidopsis thaliana] (44) | | | | \------100-----+ /----- 919451 [Arabidopsis lyrata] (59) | \-100+ | \----- Araha.4168s0010.1.p [Arabidopsis halleri] (110) | | /----- Neem_11145_a_3 [Azadirachta indica] (8) | /-100+ | | \----- Neem_24864_a_2 [Azadirachta indica] (77) |--------------65--------------+ | \---------- Cotton_A_24993_BGI-A2_v1.0 [Gossypium arboreum] (96) | | /----- RrC126_p8 [Raphanus raphanistrum] (10) | /-99-+ | | \----- Rsa1.0_00945.1_g00002.1 [Raphanus sativus] (70) | /-66-+ | | | /----- XP_009151322.1 [Brassica rapa] (79) | | \-92-+ |------------65-----------+ \----- GSBRNA2T00109796001 [Brassica napus] (87) /-60-+ | | | | /----- GSBRNA2T00145751001 [Brassica napus] (17) | | \---100---+ | | \----- XP_013623223.1 [Brassica oleracea] (52) | | | | /----- Gh_Sca135309G01 [Gossypium hirsutum] (11) | |----------------100----------------+ | | \----- RrC6561_p1 [Raphanus raphanistrum] (140) | | | | /----- XP_009130189.1 [Brassica rapa] (12) | | /-82-+ | | | \----- GSBRNA2T00060505001 [Brassica napus] (75) | | /-81-+ | | | \---------- XP_009130190.1 [Brassica rapa] (72) | | /-73-+ | | | \--------------- XP_013618730.1 [Brassica oleracea] (14) | |---------68---------+ | | | /----- Rsa1.0_00411.1_g00016.1 [Raphanus sativus] (26) | | \------100-----+ | | \----- RrC3289_p1 [Raphanus raphanistrum] (83) | | | | /----- EcC041299.10 [Eucalyptus camaldulensis] (21) | | /-100+ | | | \----- Eucgr.A02804.1.p [Eucalyptus grandis] (48) | |--------------79--------------+ | | \---------- Eucgr.K00238.1.p [Eucalyptus grandis] (73) | | | | /----- Ciclev10006893m [Citrus clementina] (27) | |----------------100----------------+ | | \----- orange1.1g034429m [Citrus sinensis] (91) | | | |----------------------------------------- EcS670990.10 [Eucalyptus camaldulensis] (31) | | | |----------------------------------------- Thhalv10004690m [Eutrema salsugineum] (33) | | | | /---------- Neem_29976_a_1 [Azadirachta indica] (36) | | | | |--------------71--------------+ /----- Neem_25391_f_1 [Azadirachta indica] (53) | | \-91-+ | | \----- 676721204 [Sisymbrium irio] (111) | | | |----------------------------------------- EcC016109.10 [Eucalyptus camaldulensis] (38) | | | | /----- Gh_A11G0089 [Gossypium hirsutum] (43) | | /-97-+ /-69-+ | | \----- Cotton_A_07539_BGI-A2_v1.0 [Gossypium arboreum] (54) | | | /-100+ | | | | | /----- Gorai.007G010900.1 [Gossypium raimondii] (99) | | | | \-100+ | | |-----------100-----------+ \----- Gh_D11G0093 [Gossypium hirsutum] (190) | | | | | | | \--------------- Thecc1EG015119t1 [Theobroma cacao] (60) | | | | | |----------------------------------------- 676729602 [Sisymbrium irio] (51) | | | | | |----------------------------------------- XP_010523506.1 [Tarenaya hassleriana] (64) | | | | | |----------------------------------------- AA5G00104 [Aethionema arabicum] (74) | | | | | |----------------------------------------- Tp2g25190 [Thellungiella parvula] (80) | | | | | |----------------------------------------- KFK27929.1 [Arabis alpina] (81) | | | | | \----------------------------------------- evm.model.supercontig_107.31 [Carica papaya] (90) | | | | /---------- Gh_A12G2065 [Gossypium hirsutum] (15) | | | | | /-100+ /----- Gh_D12G2242 [Gossypium hirsutum] (58) | | | \-100+ | | | \----- Gorai.008G244400.1 [Gossypium raimondii] (170) | | | | | | /----- Cotton_A_09986_BGI-A2_v1.0 [Gossypium arboreum] (18) /-82-+ | | /-97-+ | | | /-78-+ | \----- Gh_A08G1619 [Gossypium hirsutum] (92) | | | | |-97-+ | | | | | | /----- Gorai.004G208800.1 [Gossypium raimondii] (34) | | | | | \-98-+ | | | | | \----- Gh_D08G1932 [Gossypium hirsutum] (150) | | | | | | | |------------76-----------+ \--------------- Thecc1EG016198t1 [Theobroma cacao] (93) | | | | | | | | /----- Gorai.003G160600.1 [Gossypium raimondii] (22) | | | | /-100+ | | | | | \----- Gh_D03G1464 [Gossypium hirsutum] (94) | | | \---100---+ | | | | /----- Cotton_A_11627_BGI-A2_v1.0 [Gossypium arboreum] (37) | | | \-84-+ /-86-+ | | \----- Gh_A03G2042 [Gossypium hirsutum] (68) | | | | | | | | /----- Ciclev10021287m [Citrus clementina] (32) | | | \-------------------100------------------+ | | | \----- Neem_14100_f_1 [Azadirachta indica] (40) | | | | | |--------------------------------------------------- EcC022141.10 [Eucalyptus camaldulensis] (41) | | | | | | /----- Eucgr.E00555.1.p [Eucalyptus grandis] (47) --87-+ | |----------------------93---------------------+ | | | \----- EcC079630.10 [Eucalyptus camaldulensis] (69) | | | | | \--------------------------------------------------- evm.model.supercontig_74.64 [Carica papaya] (85) | | | | /----- XP_010540690.1 [Tarenaya hassleriana] (130) | \------------------------73------------------------+ | \----- XP_010538799.1 [Tarenaya hassleriana] (110) | \------------------------------------------------------------- AA3G00017 [Aethionema arabicum] (20) Root part of tree: /------------------------------------------------------------------ Bostr.25463s0156.1.p [Boechera stricta] (1) | | /---------------------------------------------- (173) | | | | /------- GSBRNA2T00040967001 [Brassica napus] (16) | | /-----100----+ | | | \------- XP_013622445.1 [Brassica oleracea] (61) | | | | | /-100-+ /------- RrC11096_p1 [Raphanus raphanistrum] (24) | | | | /-100-+ | | | | | \------- Rsa1.0_00511.1_g00007.1 [Raphanus sativus] (29) | | | \--63--+ | | | | /------- GSBRNA2T00151511001 [Brassica napus] (35) | | | \-100-+ | | | \------- XP_009134244.1 [Brassica rapa] (63) | | /--100-+ | | | | /------- RrC2058_p3 [Raphanus raphanistrum] (23) | /--95--+ | | /-----100----+ | | | | | | \------- Rsa1.0_03258.1_g00001.1 [Raphanus sativus] (25) | | | | | | | | | | | | /------- XP_009124795.1 [Brassica rapa] (78) | | | | \-100-+ /-100-+ | | | /--100-+ | | \------- GSBRNA2T00145482001 [Brassica napus] (120) + | | | | | | | | | | | \--100-+------------- XP_013611767.1 [Brassica oleracea] (88) | | | | | | | /-100-+ |--92-+ | \------------- GSBRNA2T00026029001 [Brassica napus] (100) | | | | | | | | | | | \--------------------------------- 676729986 [Sisymbrium irio] (56) | | | | | | | | | \---------------------------------------- Tp6g05810 [Thellungiella parvula] (50) | | | | |--100-+ | \---------------------------------------------- Thhalv10028744m [Eutrema salsugineum] (55) | | | | | \----------------------------------------------------- KFK31930.1 [Arabis alpina] (28) | | | | /------- AT4G11660.1 [Arabidopsis thaliana] (3) | \------------------------100------------------------+ | \------- 911518 [Arabidopsis lyrata] (76) | | /------- Csa08g043930.1 [Camelina sativa] (13) | /--98-+ | | \------- Csa13g048850.1 [Camelina sativa] (46) | /--100-+ | | \------------- Csa02g018770.1 [Camelina sativa] (84) \---------------------100---------------------+ | /------- Carubv10001204m [Capsella rubella] (160) \-----100----+ \------- Cagra.1912s0005.1.p [Capsella grandiflora] (180) |