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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM837
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 159: /------------------------- Bostr.7903s0021.1.p [Boechera stricta] (2) | | /---------- Csa09g002790.1 [Camelina sativa] (23) | | | /-100+ /----- Csa06g001460.1 [Camelina sativa] (58) /------100------+ | \-100+ | | | \----- Csa04g002660.1 [Camelina sativa] (150) | | /-88-+ | | | | /----- AT2G01570.1 [Arabidopsis thaliana] (99) | | | \---100---+ | \-52-+ \----- 484073 [Arabidopsis lyrata] (111) | | | | /----- Carubv10018534m [Capsella rubella] (30) | \------100-----+ | \----- Cagra.2235s0013.1.p [Capsella grandiflora] (51) | | /----- RrC44649_p1 [Raphanus raphanistrum] (3) | /------100-----+ /-96-+ | \----- Rsa1.0_00118.1_g00012.1 [Raphanus sativus] (120) | | | | | | /----- GSBRNA2T00117722001 [Brassica napus] (17) | | /------100------+ /-100+ | | | | | \----- GSBRNA2T00042826001 [Brassica napus] (52) | | | | /-99-+ | | | | | \---------- XP_013611782.1 [Brassica oleracea] (44) | | | \-100+ | | | \--------------- XP_009114228.1 [Brassica rapa] (65) | | | | | | /-------------------- 676758158 [Sisymbrium irio] (18) | | | | | | | | /----- GSBRNA2T00060177001 [Brassica napus] (43) | \-100+ | /-72-+ /-100+ | /-100+ | \----- XP_013598468.1 [Brassica oleracea] (110) | | | | | /-100+ | | | | | | | /----- Rsa1.0_00724.1_g00003.1 [Raphanus sativus] (80) | | | | | | \-100+ | | | | \-100+ \----- RrC9170_p1 [Raphanus raphanistrum] (88) | | | /-63-+ | | | | | | | /----- GSBRNA2T00001878001 [Brassica napus] (56) | | | | | \---100---+ /-100+ | | | | \----- XP_009101333.1 [Brassica rapa] (71) | | | \--63-+ | | | | | \------------------------- Tp2g13010 [Thellungiella parvula] (49) | | | | | | | \------------------------------ Thhalv10005482m [Eutrema salsugineum] (19) | | | | | \---------------------------------------------- KFK33379.1 [Arabis alpina] (24) | | | \--------------------------------------------------- AA53G00639 [Aethionema arabicum] (39) | | /---------- Csa14g018090.1 [Camelina sativa] (6) | | | /-100+ /----- Csa17g020500.1 [Camelina sativa] (66) | | \-56-+ | /-100+ \----- Csa03g018730.1 [Camelina sativa] (98) /-99-+ | | | | | \--------------- Bostr.7128s0107.1.p [Boechera stricta] (41) | | /-93-+ | | | | /----- Cagra.3501s0003.1.p [Capsella grandiflora] (55) | | | \------100-----+ | | | \----- Carubv10008833m [Capsella rubella] (190) | | /-100+ | | | | /----- Araha.16864s0002.1.p [Arabidopsis halleri] (37) | | | | /-100+ | | | | | \----- 471680 [Arabidopsis lyrata] (69) | | /-100-+ \------100-----+ --100+ | | | \---------- AT1G14920.1 [Arabidopsis thaliana] (114) | | | | | | | | /----- Thhalv10007323m [Eutrema salsugineum] (8) | \---------99--------+ \-----------100----------+ | | \----- KFK26113.1 [Arabis alpina] (86) | | | \------------------------------------ AA14G00090 [Aethionema arabicum] (76) | | /----- XP_010527787.1 [Tarenaya hassleriana] (16) | /-100+ | | \----- XP_010553798.1 [Tarenaya hassleriana] (45) \------------------------100-----------------------+ \---------- XP_010554410.1 [Tarenaya hassleriana] (68) Subtree rooted at node 228: /------------------------------ (159) | | /---------- Gorai.002G177000.1 [Gossypium raimondii] (14) | | | /-100+ /----- Gh_D01G1446 [Gossypium hirsutum] (35) | | \-100+ | /-100+ \----- Gh_A01G1242 [Gossypium hirsutum] (117) /--------------93--------------+ | | | | | \--------------- Thecc1EG010965t1 [Theobroma cacao] (73) | | /-92-+ | | | | /--------------- Eucgr.G02163.1.p [Eucalyptus grandis] (33) | | | | | | | | \-97-+ /---------- Neem_13164_f_1 [Azadirachta indica] (38) | | | | | | \-87-+ \-100+ /----- orange1.1g043131m [Citrus sinensis] (63) | | \-100+ | | \----- Ciclev10017466m [Citrus clementina] (84) | | | \------------------------- evm.model.supercontig_2.240 [Carica papaya] (36) | | /----- Carubv10003592m [Capsella rubella] (4) | /--------100--------+ | | \----- Cagra.6170s0019.1.p [Capsella grandiflora] (59) | | | | /-------------------- Bostr.26527s0463.1.p [Boechera stricta] (21) | /-88-+ | | | | | /----- Csa04838s010.1 [Camelina sativa] (53) | | | | /-100+ | | \-52-+ | \----- Csa08g009700.1 [Camelina sativa] (92) | | | /-97-+ | /--87-+ | | \---------- Csa13g020270.1 [Camelina sativa] (60) | | | \-100+ | | | \--------------- Csa20g025660.1 [Camelina sativa] (116) | | | | | | /----- AT5G17490.1 [Arabidopsis thaliana] (25) | | \-----------100----------+ | | \----- 488615 [Arabidopsis lyrata] (89) | | | | /----- RrC48_p11 [Raphanus raphanistrum] (7) | | /---100---+ | | | \----- Rsa1.0_19218.1_g00001.1 [Raphanus sativus] (42) | /-73-+ | | | | /-100+ /----- XP_013605972.1 [Brassica oleracea] (22) | | | | | /-100+ | | | | | | \----- GSBRNA2T00094828001 [Brassica napus] (82) | | | | \-100+ | | | /-63-+ | /----- GSBRNA2T00065871001 [Brassica napus] (81) | | | | | \-63-+ | | | | | \----- XP_009107522.1 [Brassica rapa] (115) | /-100+ | /-86-+ | | | | | | | \-------------------- Tp6g26730 [Thellungiella parvula] (130) | | | | | | | | | \-100-+ \------------------------- 676788954 [Sisymbrium irio] (61) | | | | | | | \------------------------------ Thhalv10015535m [Eutrema salsugineum] (62) | | | | | \----------------------------------------- KFK25966.1 [Arabis alpina] (85) | | --73-+ | /---------- XP_009130367.1 [Brassica rapa] (10) | | | | | /-69-+ /----- GSBRNA2T00076093001 [Brassica napus] (48) | | | \-100+ | | /-100+ \----- GSBRNA2T00097285001 [Brassica napus] (54) | | | | | | | \--------------- XP_013637838.1 [Brassica oleracea] (87) | | /-100+ | | | | /----- RrC2589_p5 [Raphanus raphanistrum] (29) | | | \------97------+ | | /-100+ \----- Rsa1.0_01285.1_g00014.1 [Raphanus sativus] (180) | /-100+ | | | | | | \------------------------- 676731188 [Sisymbrium irio] (26) | | | | | | | /--80-+------------------------------ KFK38060.1 [Arabis alpina] (32) | | | | | | | | | | /----- Thhalv10020431m [Eutrema salsugineum] (78) | | | | \-----------68-----------+ | | | | \----- Tp3g02450 [Thellungiella parvula] (112) | | | | | | | | /----- Araha.10914s0007.1.p [Arabidopsis halleri] (13) | | | /-100+ /-100+ | | | | | | \----- 477591 [Arabidopsis lyrata] (100) | | | | | /------100-----+ | | | | | | \---------- AT3G03450.1 [Arabidopsis thaliana] (20) | | | | | | | /-100+ | | | | /-------------------- Bostr.19046s0061.1.p [Boechera stricta] (31) | | | | | \----100---+ | | | | | | | | /---------- Csa19g005580.1 [Camelina sativa] (67) | | | | | | | | | | | \-100+ \-98-+ /-100+ /----- Csa01g003150.1 [Camelina sativa] (79) | | | | | | \-100+ | | | | | | \----- Csa15g003230.1 [Camelina sativa] (120) | | | | \-100+ | | | | | /----- Carubv10015212m [Capsella rubella] (70) | | | | \---100---+ | | | | \----- Cagra.2098s0043.1.p [Capsella grandiflora] (118) | | | | | | | \----------------------------------------- AA10G00264 [Aethionema arabicum] (140) | | | | | | /----- XP_010549753.1 [Tarenaya hassleriana] (11) | | \---------------------100---------------------+ | | \----- XP_010558681.1 [Tarenaya hassleriana] (40) | | | | /------------------------------ Thhalv10018436m [Eutrema salsugineum] (9) | | | | | | /----- XP_013612911.1 [Brassica oleracea] (27) | | | /-100+ | | | | \----- GSBRNA2T00014999001 [Brassica napus] (57) | | | /-100+ | | | | | /----- GSBRNA2T00003199001 [Brassica napus] (74) \-100+ /-100-+ | \-97-+ | | | /-100+ \----- XP_009127484.1 [Brassica rapa] (121) | | | | | | | | | | /----- RrC8312_p1 [Raphanus raphanistrum] (28) | | | /-100+ \---100---+ | | | | | \----- Rsa1.0_01442.1_g00001.1 [Raphanus sativus] (119) | | | | | | | \-100+ \-------------------- Tp5g21380 [Thellungiella parvula] (47) | /-100+ | | | | \------------------------- 676766782 [Sisymbrium irio] (50) | | | | | | /----- AT1G66350.1 [Arabidopsis thaliana] (12) | | | /---------66--------+ | | | | \----- 475738 [Arabidopsis lyrata] (90) | | | | | | | | /-------------------- Bostr.26959s0284.1.p [Boechera stricta] (15) | | \----100---+ | | | | | /----- Csa16g023800.1 [Camelina sativa] (46) | /-100+ | | /-82-+ | | | \-100+ | \----- Csa07g030410.1 [Camelina sativa] (75) | | | | /-100+ | | | | | \---------- Csa05g075230.1 [Camelina sativa] (72) | | | \-100+ | | | | /----- Carubv10020171m [Capsella rubella] (91) \---100---+ | \---100---+ | | \----- Cagra.0463s0002.1.p [Capsella grandiflora] (97) | | | \----------------------------------------- KFK41051.1 [Arabis alpina] (170) | | /----- XP_010528540.1 [Tarenaya hassleriana] (83) \-------------------100------------------+ \----- XP_010551797.1 [Tarenaya hassleriana] (160) Root part of tree: /------------------------------------------------------------------ Gorai.001G089400.1 [Gossypium raimondii] (1) | |------------------------------------------------------------------ Gh_D07G0779 [Gossypium hirsutum] (110) | | /---------------------------- (228) | | | | /--------- orange1.1g008153m [Citrus sinensis] (64) | | /---100---+ | | | \--------- Ciclev10011367m [Citrus clementina] (113) | /---100---+---100--+ + | | \------------------- Neem_1023_f_1 [Azadirachta indica] (94) | | | | | | /--------- EcS626816.10 [Eucalyptus camaldulensis] (93) | /---100--+ \--------64--------+ | | | \--------- Eucgr.J01594.1.p [Eucalyptus grandis] (95) | | | | /---100---+ \-------------------------------------- evm.model.supercontig_116.43 [Carica papaya] (34) | | | | | \----------------------------------------------- Thecc1EG019165t1 [Theobroma cacao] (5) \---100--+ | /--------- Gh_A07G0717 [Gossypium hirsutum] (77) \----------------------100----------------------+ \--------- Cotton_A_30811_BGI-A2_v1.0 [Gossypium arboreum] (96) |