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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM808
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 188: /--------------------------------- Tp6g23010 [Thellungiella parvula] (9) | | /----- RrC2707_p1 [Raphanus raphanistrum] (13) | /----100---+ | | \----- Rsa1.0_00883.1_g00005.1 [Raphanus sativus] (57) | | | /-100-+ /----- GSBRNA2T00148871001 [Brassica napus] (25) | | | /-100-+ | | | | \----- XP_009131867.1 [Brassica rapa] (34) | | \-100+ /-97-+ | | /----- GSBRNA2T00140919001 [Brassica napus] (43) | | | \-100-+ | | | \----- XP_013622097.1 [Brassica oleracea] (55) | | /-100+ | | | | /----- XP_009120677.1 [Brassica rapa] (20) | | | | /--96-+ | | | | | \----- GSBRNA2T00154124001 [Brassica napus] (67) | | | | /-100+ /-100-+ | | | | | /----- XP_013608798.1 [Brassica oleracea] (60) | | \-100-+ | | \-100-+ | | | \-100-+ \----- GSBRNA2T00106268001 [Brassica napus] (100) | | | | | | | \---------------- Rsa1.0_00010.1_g00026.1 [Raphanus sativus] (33) | | | | | \--------------------------- 676786322 [Sisymbrium irio] (18) | | | \-------------------------------------- Thhalv10015650m [Eutrema salsugineum] (77) /-88-+ | | /----- 489072 [Arabidopsis lyrata] (30) | | /-100-+ | | | \----- Araha.16261s0003.1.p [Arabidopsis halleri] (116) | | /------100------+ | | | \----------- AT5G22220.2 [Arabidopsis thaliana] (160) | | | | | | /----- Cagra.5627s0006.1.p [Capsella grandiflora] (46) | | | /----100---+ | \-------100------+ | \----- Carubv10003027m [Capsella rubella] (92) /-100-+ | | | | | /-100-+ /----- Csa08g015400.1 [Camelina sativa] (73) | | | | | /--82-+ | | | | | | \----- Csa20g035800.1 [Camelina sativa] (91) | | \-95-+ \-100+ | | | \----------- Csa13g025680.1 [Camelina sativa] (83) /-100+ | | | | | \---------------------- Bostr.26527s0055.1.p [Boechera stricta] (87) | | | | | \------------------------------------------------- KFK26334.1 [Arabis alpina] (22) --100-+ | | \------------------------------------------------------- AA8G00251 [Aethionema arabicum] (16) | | /----- XP_010520454.1 [Tarenaya hassleriana] (17) \--------------------------100-------------------------+ \----- XP_010535712.1 [Tarenaya hassleriana] (76) Subtree rooted at node 162: /----- Csa17g074300.1 [Camelina sativa] (4) /-100+ | \----- Csa14g051780.1 [Camelina sativa] (110) /-100+ | \---------- Csa03g051560.1 [Camelina sativa] (94) /-100+ | | /----- Carubv10009432m [Capsella rubella] (59) | \---100---+ | \----- Cagra.1843s0001.1.p [Capsella grandiflora] (79) /-100+ | | /----- Araha.3979s0001.1.p [Arabidopsis halleri] (27) | | /-99-+ | | | \----- 314229 [Arabidopsis lyrata] (112) /----100---+ \---100---+ | | \---------- AT1G47870.1 [Arabidopsis thaliana] (75) | | | \------------------------- Bostr.15654s0048.1.p [Boechera stricta] (86) | | /----- XP_009107400.1 [Brassica rapa] (8) | /-100+ | | \----- GSBRNA2T00094943001 [Brassica napus] (45) | /-100+ | | | /----- XP_013602158.1 [Brassica oleracea] (85) | | \-100+ /-91-+ /-100+ \----- GSBRNA2T00002070001 [Brassica napus] (89) | | | | | | | | /----- RrC11010_p1 [Raphanus raphanistrum] (63) | | | \---100---+ | | /-100+ \----- Rsa1.0_01616.1_g00006.1 [Raphanus sativus] (150) | | | | | | | | /----- Rsa1.0_03305.1_g00007.1 [Raphanus sativus] (28) | | | \------100-----+ /-100+ | /-100+ \----- RrC11711_p1 [Raphanus raphanistrum] (50) | | | | | | | | | | /----- Tp1g34840 [Thellungiella parvula] (118) | | \-100-+ \---------67--------+ | | | \----- 676737504 [Sisymbrium irio] (121) | | | /-100+ | \------------------------------ Thhalv10011567m [Eutrema salsugineum] (111) | | | | | \----------------------------------------- KFK29073.1 [Arabis alpina] (35) | | | | /----- XP_010530521.1 [Tarenaya hassleriana] (47) | \-------------------100------------------+ /-52-+ \----- XP_010539053.1 [Tarenaya hassleriana] (120) | | | | /----- Neem_6527_f_1 [Azadirachta indica] (19) | | /-100+ | | | \----- Neem_39617_f_1 [Azadirachta indica] (21) /-100+ \-------------------100------------------+ | | | /----- Ciclev10001165m [Citrus clementina] (130) | | \-100+ | | \----- orange1.1g015878m [Citrus sinensis] (115) --64-+ | | \-------------------------------------------------------- Thecc1EG046885t1 [Theobroma cacao] (44) | \------------------------------------------------------------- XP_010557435.1 [Tarenaya hassleriana] (74) Subtree rooted at node 233: /----- Gh_A09G0927 [Gossypium hirsutum] (2) /-99-+ | \----- Cotton_A_30259_BGI-A2_v1.0 [Gossypium arboreum] (38) /---100---+ | | /----- Gorai.006G114300.1 [Gossypium raimondii] (24) | \-100+ | \----- Gh_D09G0956 [Gossypium hirsutum] (88) | /-73-+ /----- Gorai.013G257100.1 [Gossypium raimondii] (14) | | /-95-+ | | | \----- Gh_D13G2317 [Gossypium hirsutum] (190) | | /-100+ | | | \---------- Cotton_A_02626_BGI-A2_v1.0 [Gossypium arboreum] (81) | \-91-+ /-100+ \--------------- Thecc1EG041291t2 [Theobroma cacao] (170) | | | | /---------- Gorai.001G123900.1 [Gossypium raimondii] (7) | | | | | |---------- Gh_D07G1097 [Gossypium hirsutum] (62) | \------100-----+ | | /----- Gh_A07G1021 [Gossypium hirsutum] (64) /-100-+ \-100+ | | \----- Cotton_A_09611_BGI-A2_v1.0 [Gossypium arboreum] (180) | | | | /----- Ciclev10028409m [Citrus clementina] (3) | | /-100+ | | | \----- orange1.1g012778m [Citrus sinensis] (68) | \--------100--------+ /-64-+ | /----- Neem_25150_f_1 [Azadirachta indica] (36) | | \-100+ | | \----- Neem_11537_f_2 [Azadirachta indica] (99) | | | | /----- (162) | | /-64-+ /-99-+ | | \----- (188) | | \------------64-----------+ | | \---------- evm.model.supercontig_195.40 [Carica papaya] (78) | | | | /----- Eucgr.J00539.1.p [Eucalyptus grandis] (93) /-90-+ \----------------100----------------+ | | \----- EcC050499.40 [Eucalyptus camaldulensis] (96) | | | | /----- EcC048317.10 [Eucalyptus camaldulensis] (23) /-55-+ \-------------------100------------------+ | | \----- Eucgr.A02602.1.p [Eucalyptus grandis] (48) | | | \--------------------------------------------------- evm.model.supercontig_104.59 [Carica papaya] (97) | | /----- Araha.1729s0004.1.p [Arabidopsis halleri] (5) | /-100+ | | \----- 482574 [Arabidopsis lyrata] (114) | /---100---+ | | \---------- AT2G36010.2 [Arabidopsis thaliana] (113) | | | | /----- Csa04g049460.1 [Camelina sativa] (10) | /-95-+ /-100+ | | | | \----- Csa06g038630.1 [Camelina sativa] (15) | | | /-100+ | | | | \---------- Csa05g018090.1 [Camelina sativa] (52) | | \-100+ | /-100+ | /----- Carubv10022932m [Capsella rubella] (51) | | | \---100---+ | | | \----- Cagra.0993s0113.1.p [Capsella grandiflora] (140) | /--97-+ | | | | \------------------------- Bostr.23794s0493.1.p [Boechera stricta] (72) | | | | | \------------------------------ KFK36495.1 [Arabis alpina] (39) | | | | /----- XP_009133061.1 [Brassica rapa] (11) | | /-100+ | | | \----- GSBRNA2T00141838001 [Brassica napus] (26) | | | | | | /----- GSBRNA2T00132443001 [Brassica napus] (32) | | /---100---+-100+ | | | | \----- XP_013625114.1 [Brassica oleracea] (66) /-100+ | | | | | | | | /----- Rsa1.0_03723.1_g00003.1 [Raphanus sativus] (49) | | | | \-100+ | | | | \----- RrC5810_p1 [Raphanus raphanistrum] (54) | | | /-100+ | | /-100+ | | /----- XP_009141554.1 [Brassica rapa] (31) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00077252001 [Brassica napus] (120) | | | | | | /-100+ | | | | | | | \---------- XP_013631837.1 [Brassica oleracea] (41) | | | | | \-100+ | | | | | | /----- Rsa1.0_00308.1_g00005.1 [Raphanus sativus] (56) | | | | | \---100---+ | | | | | \----- RrC9694_p3 [Raphanus raphanistrum] (65) | | | | /-100+ | | | | | | /----- XP_013631649.1 [Brassica oleracea] (12) | | | | | | /-100+ | | /-100+ | | | | \----- GSBRNA2T00141197001 [Brassica napus] (53) | | | | | | | /-100+ | | | | | | | | | /----- GSBRNA2T00117117001 [Brassica napus] (71) | | | | | | | | \-100+ | | | | \--50-+ | /-100+ \----- XP_009143621.1 [Brassica rapa] (90) | | | | | | | | --67-+ | | | | \-98-+ \--------------- 676787872 [Sisymbrium irio] (42) | | | | | | | | /-100+ | | \-------------------- Tp4g18270 [Thellungiella parvula] (80) | | | | | | | | | | | \------------------------------ Thhalv10016580m [Eutrema salsugineum] (95) | | | | | | | | | \----------------------------------------- AA60G00193 [Aethionema arabicum] (119) | | | | | | | | /----- XP_010520690.1 [Tarenaya hassleriana] (6) | \-82-+ \-------------------100------------------+ | | \----- XP_010527132.1 [Tarenaya hassleriana] (61) | | | | /----- orange1.1g015627m [Citrus sinensis] (37) | | /-100+ | | | \----- Ciclev10011632m [Citrus clementina] (82) | \-------------------100------------------+ | | /----- Neem_7267_f_1 [Azadirachta indica] (69) | \-100+ | \----- Neem_29359_f_1 [Azadirachta indica] (117) | | /----- Gh_Sca005145G01 [Gossypium hirsutum] (84) | /-100+ | | \----- Gorai.007G366600.1 [Gossypium raimondii] (98) \------------------------100-----------------------+ \---------- Cotton_A_38746_BGI-A2_v1.0 [Gossypium arboreum] (110) Root part of tree: /------------------------------------------------------------------ Gh_A01G2098 [Gossypium hirsutum] (1) | |------------------------------------------------------------------ Cotton_A_39109_BGI-A2_v1.0 [Gossypium arboreum] (29) | + /---------------------- (233) | /---------100---------+ | | \---------------------- Thecc1EG022853t1 [Theobroma cacao] (40) \----------97---------+ | /---------------------- Gh_D01G1236 [Gossypium hirsutum] (58) \---------100---------+ \---------------------- Gorai.002G157200.1 [Gossypium raimondii] (70) |