PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM6293
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Subtree rooted at node 81: /----- GSBRNA2T00088584001 [Brassica napus] (2) /-100+ | \----- XP_009142051.1 [Brassica rapa] (43) /-100+ | | /----- XP_013632174.1 [Brassica oleracea] (38) | \-100+ /-100-+ \----- GSBRNA2T00084696001 [Brassica napus] (39) | | | | /----- Rsa1.0_05517.1_g00002.1 [Raphanus sativus] (6) /-83-+ \---100---+ | | \----- RrC11268_p1 [Raphanus raphanistrum] (28) | | | \--------------------- 676742308 [Sisymbrium irio] (42) | | /----- XP_009142816.1 [Brassica rapa] (8) | /-99-+ | | \----- GSBRNA2T00132736001 [Brassica napus] (22) | /-100+ /-99-+ | | /----- GSBRNA2T00010831001 [Brassica napus] (25) | | | \-100+ | |----100---+ \----- XP_013633734.1 [Brassica oleracea] (36) | | | | | | /----- Rsa1.0_00469.1_g00010.1 [Raphanus sativus] (20) /-84-+ | \---100---+ | | | \----- RrC156_p15 [Raphanus raphanistrum] (45) | | | | | \-------------------------- Tp4g24450 [Thellungiella parvula] (26) /-------82------+ | | | \------------------------------- KFK37090.1 [Arabis alpina] (18) | | | \------------------------------------ Thhalv10016847m [Eutrema salsugineum] (10) | | /----- Neem_39485_f_1 [Azadirachta indica] (3) | /-100+ | | \----- Neem_9557_f_1 [Azadirachta indica] (35) | /-86-+ | | \---------- evm.TU.contig_45766.1 [Carica papaya] (29) | /-------90------+ | | | /----- orange1.1g018007m [Citrus sinensis] (19) | | \---100---+ | | \----- Ciclev10005233m [Citrus clementina] (40) | | | | /----- Gorai.006G140200.1 [Gossypium raimondii] (7) | | /-100+ | | | \----- Gh_D09G1183 [Gossypium hirsutum] (33) | | /-100+ | | | | /----- Gh_A09G1177 [Gossypium hirsutum] (15) /-100+ /-66-+ | \-100+ | | | | /--89-+ \----- Cotton_A_07788_BGI-A2_v1.0 [Gossypium arboreum] (17) | | | | | | | | | | | \--------------- Thecc1EG024842t1 [Theobroma cacao] (32) | | | | | | | | | /-94-+ /---------- Gorai.002G228900.1 [Gossypium raimondii] (14) | | | | | | | | | | | | | | /----- Gh_A01G1661 [Gossypium hirsutum] (31) | | /-100+ | | \----99----+-100+ | | | | \-53-+ | \----- Cotton_A_15348_BGI-A2_v1.0 [Gossypium arboreum] (41) | | | | | | | | | | | \---------- Gh_D01G1910 [Gossypium hirsutum] (44) | | | | | | | | | \-------------------------- Eucgr.A02417.1.p [Eucalyptus grandis] (16) /-97-+ | /-100+ | | | | | | \------------------------------------ evm.model.supercontig_85.115 [Carica papaya] (34) | | | | | | | | | | /----- XP_010554849.1 [Tarenaya hassleriana] (4) | | | | | /-79-+ | | \-100-+ | | \----- XP_010547953.1 [Tarenaya hassleriana] (37) | | | \--------------100-------------+ | | | \---------- XP_010524295.1 [Tarenaya hassleriana] (23) | | | --100+ | \---------------------------------------------- AA21G00007 [Aethionema arabicum] (13) | | | | /----- 903576 [Arabidopsis lyrata] (9) | | /-73-+ | | | \----- AT2G42280.1 [Arabidopsis thaliana] (30) | \----------------------100---------------------+ | \---------- Araha.10304s0001.1.p [Arabidopsis halleri] (24) | \-------------------------------------------------------------- Bostr.25993s0551.1.p [Boechera stricta] (12) Root part of tree: /------------------------------------------------------------------- Carubv10023498m [Capsella rubella] (1) | |------------------------------------------------------------------- Cagra.2636s0012.1.p [Capsella grandiflora] (21) | + /-------------------------------------------------- (81) | | | | /----------------- Csa05g009320.1 [Camelina sativa] (5) \-------100------+ /-------61------+ | | \----------------- Csa06g048310.1 [Camelina sativa] (11) \-------100------+ \--------------------------------- Csa04g057760.1 [Camelina sativa] (27) |