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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM6101
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Subtree rooted at node 73: /------------------------------- Thhalv10025906m [Eutrema salsugineum] (2) | | /----- XP_009138768.1 [Brassica rapa] (4) | /-100+ | | \----- GSBRNA2T00011397001 [Brassica napus] (13) | /-87-+ | | | /----- XP_013617634.1 [Brassica oleracea] (10) | | \-99-+ | /-100-+ \----- GSBRNA2T00131093001 [Brassica napus] (16) | | | | | | /----- Rsa1.0_00037.1_g00055.1 [Raphanus sativus] (20) | | \---100---+ | | \----- RrC16149_p1 [Raphanus raphanistrum] (23) | | |----55---+--------------------- KFK30320.1 [Arabis alpina] (11) | | | | /----- RrC1432_p5 [Raphanus raphanistrum] (21) | | /---100---+ | | | \----- Rsa1.0_00621.1_g00010.1 [Raphanus sativus] (25) | | | | \-100-+ /----- GSBRNA2T00066805001 [Brassica napus] (26) | | /-100+ | | | \----- XP_013595493.1 [Brassica oleracea] (31) /-72-+ \-100+ | | | /----- XP_009138469.1 [Brassica rapa] (27) | | \-100+ | | \----- GSBRNA2T00075260001 [Brassica napus] (37) | | | | /----- Csa11g004530.1 [Camelina sativa] (6) | | /-94-+ | | | \----- Csa10g004010.1 [Camelina sativa] (29) | | /-88-+ | | | \---------- Csa11g004520.1 [Camelina sativa] (22) | | /-100-+ | | | \--------------- Csa12g004270.1 [Camelina sativa] (44) | | | /-100+ | /-96-+--------------------- Bostr.7867s1570.1.p [Boechera stricta] (8) | | | | | | | | | | /----- 490909 [Arabidopsis lyrata] (24) | | | | \------100------+ | | |-99-+ \----- AT4G36990.1 [Arabidopsis thaliana] (38) | | | | | | | | /----- Carubv10005408m [Capsella rubella] (18) /-100+ | | \---------100--------+ | | | | \----- Cagra.4909s0039.1.p [Capsella grandiflora] (45) | | | | | | | \------------------------------- Tp7g34770 [Thellungiella parvula] (36) | | | /--69-+ | \------------------------------------ AA30G00224 [Aethionema arabicum] (19) | | | | | \----------------------------------------- XP_010531239.1 [Tarenaya hassleriana] (5) | | /-100+ | /----- XP_010547515.1 [Tarenaya hassleriana] (12) | | \-------------------100------------------+ | | \----- XP_010550365.1 [Tarenaya hassleriana] (39) | | | \---------------------------------------------------- Eucgr.I00929.1.p [Eucalyptus grandis] (33) /-66-+ | | /----- orange1.1g026263m [Citrus sinensis] (28) | | /-100+ | | | \----- Ciclev10026058m [Citrus clementina] (35) --100+ \----------------------100---------------------+ | \---------- Neem_6837_f_2 [Azadirachta indica] (46) | \-------------------------------------------------------------- evm.model.supercontig_55.150 [Carica papaya] (15) Root part of tree: /------------------------------------------------------------------- Gh_A02G1510 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Cotton_A_09236_BGI-A2_v1.0 [Gossypium arboreum] (40) | | /----------------------------- (73) | | | | /---------- Gh_A10G0827 [Gossypium hirsutum] (30) | /---88---+ /---71---+ | | | | \---------- Cotton_A_30136_BGI-A2_v1.0 [Gossypium arboreum] (32) | | \---100---+ + | | /---------- Gorai.011G105700.1 [Gossypium raimondii] (34) | /----60---+ \---100--+ | | | \---------- Gh_D10G0933 [Gossypium hirsutum] (41) | | | | | \-------------------------------------- Thecc1EG000610t1 [Theobroma cacao] (17) | /---100--+ | | | /---------- Gh_D11G0496 [Gossypium hirsutum] (7) | | | /---99---+ | | | | \---------- Gorai.007G053900.1 [Gossypium raimondii] (9) | | \-------------100------------+ \----84---+ | /---------- Gh_A11G0426 [Gossypium hirsutum] (42) | \---100--+ | \---------- Cotton_A_33085_BGI-A2_v1.0 [Gossypium arboreum] (43) | | /---------- Gh_D03G0203 [Gossypium hirsutum] (3) \----------------------100---------------------+ \---------- Gorai.003G023500.1 [Gossypium raimondii] (14) |