PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5638
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Subtree rooted at node 84: /--------------------------------------------------------- KFK36882.1 [Arabis alpina] (2) | | /------------------------------------ XP_010534544.1 [Tarenaya hassleriana] (3) | | | | /----- Gh_A10G2052 [Gossypium hirsutum] (6) | | /-100+ | | | \----- Cotton_A_13543_BGI-A2_v1.0 [Gossypium arboreum] (19) | | /-100+ | | | | /----- Gorai.011G278500.1 [Gossypium raimondii] (20) | | | \-100+ | | /-100-+ \----- Gh_D10G2478 [Gossypium hirsutum] (23) | | | | | | | \--------------- Thecc1EG042629t1 [Theobroma cacao] (42) | /------100------+ | | | | /-99-+ /----- Ciclev10031463m [Citrus clementina] (18) | | | | | /-100+ | | | | | | \----- orange1.1g012494m [Citrus sinensis] (30) | | | /-70-+ \----100---+ /-97-+ | | | | \---------- Neem_8731_f_1 [Azadirachta indica] (24) | | | | | | | | | |-100+ \-------------------------- Eucgr.J00250.1.p [Eucalyptus grandis] (25) | | | | | | | | | \------------------------------- evm.model.supercontig_19.238 [Carica papaya] (15) | | | | | | | \------------------------------------ XP_010533876.1 [Tarenaya hassleriana] (31) | | | | | | /----- GSBRNA2T00037152001 [Brassica napus] (4) | | | /-81-+ | | | | \----- XP_009116273.1 [Brassica rapa] (21) | | | /-100+ | | | | | /----- XP_013599758.1 [Brassica oleracea] (12) | | | | \-100+ | | | /-100-+ \----- GSBRNA2T00156044001 [Brassica napus] (32) | | | | | | | | | | /----- Rsa1.0_01137.1_g00007.1 [Raphanus sativus] (7) | \-100+ /-93-+ \---100---+ | | | | \----- RrC3259_p2 [Raphanus raphanistrum] (37) | | | | | | /-100+ \--------------------- 676776072 [Sisymbrium irio] (5) | | | | | | /-100+ \-------------------------- Tp5g06740 [Thellungiella parvula] (13) | | | | | | /-54-+ \------------------------------- Thhalv10010431m [Eutrema salsugineum] (41) | | | | --100+ | | \------------------------------------ KFK34814.1 [Arabis alpina] (44) | | | | | | /--------------------- Bostr.20505s0177.1.p [Boechera stricta] (22) | | | | | | | | /----- Csa06g030380.1 [Camelina sativa] (26) | | /-100+ | /-54-+ | | | | /-100+ | \----- Csa09g067790.1 [Camelina sativa] (40) | | | | | | /-100+ | | | | | | | \---------- Csa04g042070.1 [Camelina sativa] (29) | | | | | \-100-+ | | | | | | /----- Carubv10017397m [Capsella rubella] (28) | | | \------98------+ \---100---+ | | | | \----- Cagra.0003s0013.1.p [Capsella grandiflora] (45) | \-100-+ | | | | /---------- AT3G55730.1 [Arabidopsis thaliana] (34) | | | | | | \------100------+ /----- Araha.52008s0001.1.p [Arabidopsis halleri] (36) | | \-100+ | | \----- 486007 [Arabidopsis lyrata] (38) | | | \---------------------------------------------- AA61G00057 [Aethionema arabicum] (39) | | /----- Thhalv10016794m [Eutrema salsugineum] (8) | /-------59------+ | | \----- Tp4g22170 [Thellungiella parvula] (14) | | \-------------------100------------------+ /--------------- RrC5096_p1 [Raphanus raphanistrum] (11) | | | | /----- GSBRNA2T00116801001 [Brassica napus] (16) \-100-+ /-100+ | | \----- XP_009143276.1 [Brassica rapa] (46) \-100+ | /----- XP_013633911.1 [Brassica oleracea] (17) \-100+ \----- GSBRNA2T00012594001 [Brassica napus] (47) Root part of tree: /------------------------------------------------------------------- AT2G39880.1 [Arabidopsis thaliana] (1) | |------------------------------------------------------------------- 870409 [Arabidopsis lyrata] (10) | + /------------------------------------------------------ (84) | | | | /---------------------------------------- Bostr.23794s0078.1.p [Boechera stricta] (9) \-----100----+ | | | /------------- Carubv10023414m [Capsella rubella] (27) \------98-----+ /-----100-----+ | | \------------- Cagra.10445s0001.1.p [Capsella grandiflora] (35) \-----100----+ | /------------- Csa04g054040.1 [Camelina sativa] (33) \-----100-----+ \------------- Csa06g044030.1 [Camelina sativa] (43) |