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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM545
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 231: /----- EcS751352.10 [Eucalyptus camaldulensis] (2) /------------------------100-----------------------+ | \----- Eucgr.F00378.1.p [Eucalyptus grandis] (98) | | /----- 676719170 [Sisymbrium irio] (3) | /-----------------58----------------+ | | \----- KFK32818.1 [Arabis alpina] (135) | | | | /----- Cagra.1080s0021.1.p [Capsella grandiflora] (4) | |----------------100----------------+ | | \----- Carubv10023682m [Capsella rubella] (6) | | | | /----- GSBRNA2T00032865001 [Brassica napus] (7) | | /-77-+ | | | \----- GSBRNA2T00032864001 [Brassica napus] (136) | | /-66-+ | | | \---------- XP_009140353.1 [Brassica rapa] (47) | |-----------100-----------+ | | | /----- GSBRNA2T00149729001 [Brassica napus] (12) | | \---100---+ | | \----- XP_013631195.1 [Brassica oleracea] (84) | | | | /---------- AT4G40060.1 [Arabidopsis thaliana] (13) | | | | | /---100---+ /----- 490793 [Arabidopsis lyrata] (79) | | | \-100+ | | | \----- Araha.1153s0001.1.p [Arabidopsis halleri] (110) | | | | | | /----- Carubv10005341m [Capsella rubella] (22) | | | /---100---+ | | | | \----- Cagra.5414s0037.1.p [Capsella grandiflora] (114) | | /----72---+ | | | | |-99-+ /----- Csa10g002940.1 [Camelina sativa] (70) | | | | | /-99-+ | | | | | | \----- Csa11g003300.1 [Camelina sativa] (88) | | | | \-100+ | | | | \---------- Csa12g002970.1 [Camelina sativa] (130) | | | | | | | \-------------------- Bostr.25542s0202.1.p [Boechera stricta] (113) | | | | | | /----- RrC2708_p1 [Raphanus raphanistrum] (21) | | | /---100---+ | | | | \----- Rsa1.0_02161.1_g00005.1 [Raphanus sativus] (140) | | | | | | /--99-+ /-100+ /----- XP_013623152.1 [Brassica oleracea] (29) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00067972001 [Brassica napus] (73) | | | | | \-100+ | | | | /-100+ | /----- GSBRNA2T00150974001 [Brassica napus] (63) | | | | | | \-100+ | | | | | | \----- XP_009109426.1 [Brassica rapa] (170) | | | | | | | | | | | \-------------------- KFK30396.1 [Arabis alpina] (94) | | | | | | | | | | /----- XP_009130625.1 [Brassica rapa] (51) | | | | | /-100+ | | | | | | \----- GSBRNA2T00121635001 [Brassica napus] (141) | | | \-59-+ /-100+ | | | | | | /----- GSBRNA2T00131207001 [Brassica napus] (83) | |-89-+ | | \-100+ | /----53---+ | | /-100+ \----- XP_013609150.1 [Brassica oleracea] (93) | | | | | | | | | | | | | | /----- Rsa1.0_06073.1_g00002.1 [Raphanus sativus] (56) | | | | | | \---100---+ | | | | | | \----- RrC3392_p1 [Raphanus raphanistrum] (120) | | | | \-88-+ | | | | | /----- 676744088 [Sisymbrium irio] (78) | | | | | /-96-+ | | | | | | \----- Thhalv10025832m [Eutrema salsugineum] (110) | | | | \----99---+ | | | | \---------- Tp7g35790 [Thellungiella parvula] (119) | | | | /-69-+ | | | /----- XP_010526667.1 [Tarenaya hassleriana] (118) | | | | \--------------97--------------+ | | | | \----- XP_010555396.1 [Tarenaya hassleriana] (137) | | | | | | | | /----- Csa07g052530.1 [Camelina sativa] (15) | | | | | | | | |-----------------65----------------+----- Csa16g044190.1 [Camelina sativa] (57) | | | | | | | | | \----- Csa09g086760.1 [Camelina sativa] (65) | | | | | | | |----------------------------------------- GSBRNA2T00108336001 [Brassica napus] (16) | | | | | | | |----------------------------------------- Bostr.19427s0014.1.p [Boechera stricta] (17) | | | | | | | | /----- RrC23998_p1 [Raphanus raphanistrum] (23) | | | |-----------------95----------------+ | | | | \----- Rsa1.0_02481.1_g00002.1 [Raphanus sativus] (58) | | | | | | | | /----- XP_013605522.1 [Brassica oleracea] (24) | | | | /-100+ | | | | | \----- GSBRNA2T00127452001 [Brassica napus] (34) | | | | /-88-+ | | | | | | /----- XP_009112528.1 [Brassica rapa] (87) | | | | | \-100+ | | | |------------99-----------+ \----- GSBRNA2T00078194001 [Brassica napus] (160) | | | | | | | | | | /----- Rsa1.0_34622.1_g00001.1 [Raphanus sativus] (32) | | | | \---100---+ | | | | \----- Rsa1.0_18670.1_g00001.1 [Raphanus sativus] (42) | | | | | | | | /----- Tp4g01450 [Thellungiella parvula] (36) | | | |-----------------86----------------+ | | | | \----- Thhalv10000259m [Eutrema salsugineum] (133) | | | | | | | | /---------- AT2G22430.1 [Arabidopsis thaliana] (100) | | | | | | | | |--------------99--------------+ /----- 481105 [Arabidopsis lyrata] (140) | | | | \-89-+ | | | | \----- Araha.3205s0024.1.p [Arabidopsis halleri] (122) | | | | | | | |----------------------------------------- AA46G00133 [Aethionema arabicum] (129) | | | | | | | \----------------------------------------- RrC5542_p2 [Raphanus raphanistrum] (131) | | | | | | /----- Gh_D12G0780 [Gossypium hirsutum] (5) | | | /-99-+ | | | | \----- Gorai.008G091100.1 [Gossypium raimondii] (130) | | | /-100+ | | | | \---------- Gh_A12G0771 [Gossypium hirsutum] (55) | | | | | | | | /----- Ciclev10026013m [Citrus clementina] (8) | | | | /-100+ | | | | | \----- orange1.1g019540m [Citrus sinensis] (112) | | | |-77-+ | | | | | /----- Neem_9814_f_1 [Azadirachta indica] (52) | | | | \-100+ | | | | \----- Neem_28333_f_1 [Azadirachta indica] (61) | | | | | | | | /----- Gorai.003G041500.1 [Gossypium raimondii] (9) | | | | /-68-+ | | | | | \----- Gh_D03G0374 [Gossypium hirsutum] (18) | | | | | | | | |-100+ /----- Gh_Sca028226G01 [Gossypium hirsutum] (66) | | | | | | | | | | \-97-+----- Cotton_A_11191_BGI-A2_v1.0 [Gossypium arboreum] (76) | | | /-55-+ | | | | | | \----- Gh_A02G1237 [Gossypium hirsutum] (123) | | | | | | | | | |--------------- XP_010523301.1 [Tarenaya hassleriana] (26) | | | | | | \-54-+ | |--------------- Thecc1EG001039t1 [Theobroma cacao] (31) | | | | | | | | /---------- Gh_D10G0992 [Gossypium hirsutum] (39) | | | | | | | | | | /----- Gh_A10G0774 [Gossypium hirsutum] (44) | | | |-100+-100+ | |--------------55--------------+ | | \----- Cotton_A_24633_BGI-A2_v1.0 [Gossypium arboreum] (143) | | | | | | | | | \---------- Gorai.011G111500.1 [Gossypium raimondii] (82) | | | | | | | |--------------- evm.model.supercontig_55.70 [Carica papaya] (115) | | | | --99-+ | | \--------------- Eucgr.H04742.1.p [Eucalyptus grandis] (132) | | | | | | /----- Gh_D11G2140 [Gossypium hirsutum] (27) | | | /-63-+ | | | | \----- Gorai.007G235200.1 [Gossypium raimondii] (128) | | \---100---+ | | \---------- Gh_A11G1855 [Gossypium hirsutum] (33) | | | | /----- orange1.1g019954m [Citrus sinensis] (11) | | /----------------100----------------+ | | | \----- Ciclev10024310m [Citrus clementina] (74) | | | | | | /------------------------------ evm.model.supercontig_1379.1 [Carica papaya] (14) | | | | | | | | /----- Gh_D02G1724 [Gossypium hirsutum] (25) | | | | /-63-+ | | | | | \----- Gorai.005G189800.1 [Gossypium raimondii] (81) | | | | /-100+ | | | | | | /----- Gh_A03G1284 [Gossypium hirsutum] (68) | | | /--86-+ | \-99-+ | | | | | /-97-+ \----- Cotton_A_19290_BGI-A2_v1.0 [Gossypium arboreum] (85) | | | | | | | | | | | | /-97-+ \--------------- Cotton_A_33264_BGI-A2_v1.0 [Gossypium arboreum] (28) | | | | | | | | | | | | | \-------------------- Thecc1EG009970t1 [Theobroma cacao] (180) | | | | | | | | | | \-85-+ /----- Ciclev10032229m [Citrus clementina] (35) | | |-68-+ | /-100+ | | | | | | \----- orange1.1g028655m [Citrus sinensis] (89) | | | | \------100-----+ | | | | | /----- Neem_615_f_5 [Azadirachta indica] (59) | | | | \-100+ | | | | \----- Neem_21804_f_1 [Azadirachta indica] (86) | | | | | | | | /----- Eucgr.B03409.1.p [Eucalyptus grandis] (45) | | | \--------------100-------------+ | | | \----- EcC000125.10 [Eucalyptus camaldulensis] (121) | | | | | /-79-+ /----- Gorai.008G190300.1 [Gossypium raimondii] (19) | | | | /-100+ | | | | | \----- Gh_D12G1725 [Gossypium hirsutum] (142) | | | | /-91-+ | | | | | \---------- Cotton_A_25802_BGI-A2_v1.0 [Gossypium arboreum] (48) | | | | /-100+ | | | | | \--------------- Gh_A12G2639 [Gossypium hirsutum] (41) | | | | /-98-+ | | | | | \-------------------- Thecc1EG013821t2 [Theobroma cacao] (80) | | | | | | | | | | /----- Gh_D07G0654 [Gossypium hirsutum] (54) | | | |-------90------+ /-100+ | | | | | | \----- Gorai.001G073600.1 [Gossypium raimondii] (60) | | | | | /-100+ | | | | | | \---------- Gh_A07G0585 [Gossypium hirsutum] (64) | |-82-+ | \---100---+ | | | | \--------------- Cotton_A_02692_BGI-A2_v1.0 [Gossypium arboreum] (72) | | | | | | | |----------------------------------------- evm.model.supercontig_17.200 [Carica papaya] (38) | | | | | | | |----------------------------------------- Gh_D03G0850 [Gossypium hirsutum] (40) | | | | | | | |----------------------------------------- Csa22754s010.1 [Camelina sativa] (43) | | | | | | | | /----- Eucgr.B00423.1.p [Eucalyptus grandis] (125) | | | |----------------100----------------+ | | | | \----- EcC027177.10 [Eucalyptus camaldulensis] (138) | | | | | | | \----------------------------------------- Rsa1.0_41930.1_g00001.1 [Raphanus sativus] (134) | | | | | \---------------------------------------------- AA39G00606 [Aethionema arabicum] (126) | | | \--------------------------------------------------- AA54G00108 [Aethionema arabicum] (150) | | /----- Neem_25464_f_1 [Azadirachta indica] (37) | /-100+ | | \----- Neem_9905_f_2 [Azadirachta indica] (91) |------------------------99------------------------+ | | /----- Ciclev10002182m [Citrus clementina] (90) | \-100+ | \----- orange1.1g024675m [Citrus sinensis] (95) | | /----- XP_010543827.1 [Tarenaya hassleriana] (69) \---------------------------59--------------------------+ \----- evm.model.supercontig_36.180 [Carica papaya] (117) Root part of tree: /------------------------------------------------------------------ Gh_D09G1239 [Gossypium hirsutum] (1) | |------------------------------------------------------------------ Gh_D08G1853 [Gossypium hirsutum] (111) | | /--------- Gh_D12G0450 [Gossypium hirsutum] (75) |---------------------------100--------------------------+ | \--------- Gh_D10G0770 [Gossypium hirsutum] (139) | | /--------- (231) | /----92---+ | | \--------- Thecc1EG034849t1 [Theobroma cacao] (53) | | | /--------99--------+ /--------- Gorai.009G233900.1 [Gossypium raimondii] (67) | | | | | | | |--------- Gh_A05G1913 [Gossypium hirsutum] (92) | | \---100---+ | | |--------- Gh_D05G2148 [Gossypium hirsutum] (99) | | | + /---99---+ \--------- Cotton_A_26519_BGI-A2_v1.0 [Gossypium arboreum] (116) | | | | | | /---------------------------- Gh_A06G0266 [Gossypium hirsutum] (20) | | | | | | | | /------------------- Gh_D11G2639 [Gossypium hirsutum] (50) | | | | | | | \----86---+---94---+ /--------- Gh_D06G0289 [Gossypium hirsutum] (120) | | | \----68---+ | | | \--------- Gorai.010G037800.1 [Gossypium raimondii] (124) | | | | /----99---+ \---------------------------- Cotton_A_02815_BGI-A2_v1.0 [Gossypium arboreum] (96) | | | | | | /--------- Gh_A11G1037 [Gossypium hirsutum] (30) | | |-----------------100-----------------+ | | | \--------- Gh_D13G1514 [Gossypium hirsutum] (46) | | | | | |----------------------------------------------- Gorai.008G075100.1 [Gossypium raimondii] (62) | | | \---100--+ |----------------------------------------------- Gorai.007G140200.1 [Gossypium raimondii] (71) | | | \----------------------------------------------- Gorai.003G035400.1 [Gossypium raimondii] (127) | | /--------- Gorai.004G113700.1 [Gossypium raimondii] (10) | | | |--------- Gorai.006G273000.1 [Gossypium raimondii] (49) | | \-----------------------99----------------------+--------- Gorai.007G229700.1 [Gossypium raimondii] (77) | |--------- Gh_D08G0905 [Gossypium hirsutum] (97) | \--------- Gh_D01G1287 [Gossypium hirsutum] (190) |