PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4849
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Subtree rooted at node 94: /---------- GSBRNA2T00045527001 [Brassica napus] (4) | /-100+ /----- XP_009128203.1 [Brassica rapa] (14) | \-100+ | \----- GSBRNA2T00082955001 [Brassica napus] (43) /-----------------100----------------+ | | /----- Rsa1.0_00167.1_g00020.1 [Raphanus sativus] (28) | \---100---+ | \----- RrC1940_p5 [Raphanus raphanistrum] (49) | | /---------- Csa09g082580.1 [Camelina sativa] (9) | | | /-100+ /----- Csa16g041060.1 [Camelina sativa] (24) | | \-61-+ | | \----- Csa07g048450.1 [Camelina sativa] (39) | /--95-+ | | | /----- Carubv10020016m [Capsella rubella] (40) | | \---100---+ | /-99-+ \----- Cagra.20992s0002.1.p [Capsella grandiflora] (52) | | | | | \--------------------- Bostr.20129s0126.1.p [Boechera stricta] (32) /-54-+ | | | /-100+ /----- Araha.11451s0008.1.p [Arabidopsis halleri] (10) | | | | /-100+ | | | | | \----- 895569 [Arabidopsis lyrata] (27) | | /-51-+ \------100------+ | | | | \---------- AT1G76880.1 [Arabidopsis thaliana] (45) | | | | | | /-53-+ \------------------------------- Thhalv10018297m [Eutrema salsugineum] (20) | | | | | | /-58-+ \------------------------------------ Tp5g32000 [Thellungiella parvula] (41) | | | | | | | \----------------------------------------- 676741296 [Sisymbrium irio] (48) | | | | | | /----- RrC16491_p2 [Raphanus raphanistrum] (13) | | | /---100---+ | | | | \----- Rsa1.0_01036.1_g00010.1 [Raphanus sativus] (47) | \--53-+ | | | /-100-+ /----- XP_009106347.1 [Brassica rapa] (25) /-100+ | | | /-100+ | | | | | | \----- GSBRNA2T00146565001 [Brassica napus] (30) | | | | \-100+ | | | | | /----- GSBRNA2T00147827001 [Brassica napus] (36) | | \-----------91-----------+ \-100+ | | | \----- XP_013592300.1 [Brassica oleracea] (38) | | | | | | /----- KFK42101.1 [Arabis alpina] (17) | | \-------93------+ | | \----- AA31G00286 [Aethionema arabicum] (19) | | | | /----- GSBRNA2T00099318001 [Brassica napus] (8) --59-+ | /-100+ | | | \----- XP_009104654.1 [Brassica rapa] (44) | | /-100+ | | | | /----- GSBRNA2T00091264001 [Brassica napus] (15) | | | \-100+ | \-------------------100-------------------+ \----- XP_013591974.1 [Brassica oleracea] (22) | | | | /----- RrC4755_p1 [Raphanus raphanistrum] (16) | \---100---+ | \----- Rsa1.0_04285.1_g00001.1 [Raphanus sativus] (23) | | /----- XP_010531649.1 [Tarenaya hassleriana] (11) \---------------------------100--------------------------+ \----- XP_010539733.1 [Tarenaya hassleriana] (35) Root part of tree: /------------------------------------------------------------------- evm.model.supercontig_21.195 [Carica papaya] (1) | |------------------------------------------------------------------- Neem_9967_f_1 [Azadirachta indica] (37) | | /------- Gorai.002G231500.1 [Gossypium raimondii] (2) | /---95--+ | | \------- Gh_D01G1936 [Gossypium hirsutum] (6) | /--100-+ | | | /------- Cotton_A_15314_BGI-A2_v1.0 [Gossypium arboreum] (31) | | \--100--+ | | \------- Gh_A01G1687 [Gossypium hirsutum] (53) | /---83--+ | | | /------- Cotton_A_12729_BGI-A2_v1.0 [Gossypium arboreum] (3) | | | /--100--+ | | | | \------- Gh_A05G2066 [Gossypium hirsutum] (7) | | \--100-+ + /--100-+ | /------- Gh_D05G2306 [Gossypium hirsutum] (29) | | | \--100--+ | | | \------- Gorai.009G253700.1 [Gossypium raimondii] (34) | | | | /---95--+ \------------------------------ Thecc1EG035565t1 [Theobroma cacao] (42) | | | | | | /------- Neem_4111_f_1 [Azadirachta indica] (5) | | \--------------99-------------+ | /--100-+ \------- evm.model.supercontig_21.194 [Carica papaya] (50) | | | | | | /------- (94) | /--100--+ \-----------------100-----------------+ | | | \------- XP_010537279.1 [Tarenaya hassleriana] (46) | | | | | \---------------------------------------------------- Eucgr.F04239.1.p [Eucalyptus grandis] (12) \--97--+ | /---------------------- Thecc1EG035571t1 [Theobroma cacao] (18) | | | | /------- Gh_D05G2307 [Gossypium hirsutum] (21) \-----------------100-----------------+ /--100--+ | | \------- Gorai.009G253900.1 [Gossypium raimondii] (33) \--100-+ | /------- Gh_A05G2067 [Gossypium hirsutum] (26) \--100--+ \------- Cotton_A_12728_BGI-A2_v1.0 [Gossypium arboreum] (51) |