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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4786
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Subtree rooted at node 90: /----- Cotton_A_01620_BGI-A2_v1.0 [Gossypium arboreum] (2) /-72-+ | \----- Gh_A02G1575 [Gossypium hirsutum] (34) /----100---+ | | /----- Gorai.003G015400.1 [Gossypium raimondii] (4) | \-100+ | \----- Gh_D03G0149 [Gossypium hirsutum] (6) /-100+ | | /--------------- Thecc1EG000399t1 [Theobroma cacao] (8) | | | | | | /----- Gh_D12G0611 [Gossypium hirsutum] (22) | \-100-+ /-100+ | | | \----- Gorai.008G068100.1 [Gossypium raimondii] (30) | \-100+ | | /----- Gh_A12G0601 [Gossypium hirsutum] (32) /-56-+ \-93-+ | | \----- Cotton_A_14771_BGI-A2_v1.0 [Gossypium arboreum] (40) | | | |-------------------------- evm.model.supercontig_6.108 [Carica papaya] (9) | | | | /----- Ciclev10025169m [Citrus clementina] (24) | | /-100+ /-100+ | | \----- orange1.1g006986m [Citrus sinensis] (48) | | \------100------+ | | | /----- Neem_1555_f_3 [Azadirachta indica] (29) | | \-100+ | | \----- Neem_28455_f_1 [Azadirachta indica] (37) /-100+ | | | \------------------------------- Eucgr.I02451.1.p [Eucalyptus grandis] (28) | | | | /----- XP_010558259.1 [Tarenaya hassleriana] (5) | \--------------100-------------+ | \----- XP_010550390.1 [Tarenaya hassleriana] (51) | | /----- Carubv10017026m [Capsella rubella] (10) | /----84---+ | | \----- Carubv10016973m [Capsella rubella] (27) | | | /--77-+ /----- Csa04g036270.1 [Camelina sativa] (25) | | | /-67-+ | | | | \----- Csa09g053620.1 [Camelina sativa] (50) | /-63-+ \-99-+ | | | \---------- Csa06g024650.1 [Camelina sativa] (44) /-100+ | | | | | \--------------------- Bostr.6864s0182.1.p [Boechera stricta] (11) | | | | | | /---------- AT3G50650.1 [Arabidopsis thaliana] (23) | | /-91-+ | | | | |-------78------+ /----- 485412 [Arabidopsis lyrata] (26) | | | | \-93-+ | | | | \----- Araha.17825s0003.1.p [Arabidopsis halleri] (46) | | | | | | | \-------------------------- Cagra.0926s0026.1.p [Capsella grandiflora] (47) | | | | | /-100+ /---------- 676759086 [Sisymbrium irio] (12) /-100-+ | | | | | | | | | /-100+ /----- RrC17941_p1 [Raphanus raphanistrum] (13) | | | | | | \-100+ | | | | | /-100-+ \----- Rsa1.0_06996.1_g00001.1 [Raphanus sativus] (36) | | \-100+ | | | | | | \---100---+ \--------------- Thhalv10011122m [Eutrema salsugineum] (52) | | | | | | | \--------------------- Tp5g11570 [Thellungiella parvula] (42) | | | | | \------------------------------------ AA13G00053 [Aethionema arabicum] (14) /-99-+ | | | \---------------------------------------------- AA8G00048 [Aethionema arabicum] (39) | | | | /--------------- Bostr.0568s0096.1.p [Boechera stricta] (15) | | | | | /-100-+ /---------- Csa02g075990.1 [Camelina sativa] (20) | | | | | | | | \-100+ /----- Csa11g104190.1 [Camelina sativa] (31) /-100+ | | \-100+ | | \--------------100-------------+ \----- Csa18g040790.1 [Camelina sativa] (41) | | | | | | /----- 496923 [Arabidopsis lyrata] (21) | | \-------99------+ --100+ | \----- AT5G66770.1 [Arabidopsis thaliana] (43) | | | \--------------------------------------------------------- KFK28360.1 [Arabis alpina] (7) | \-------------------------------------------------------------- Thhalv10003860m [Eutrema salsugineum] (16) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00011540001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009103487.1 [Brassica rapa] (3) | | /------------- (90) | /-----100-----+ | | \------------- Tp2g29910 [Thellungiella parvula] (45) | /-----100----+ + | \--------------------------- 676752178 [Sisymbrium irio] (17) | | | /-----100-----+ /--------------------------- RrC3811_p1 [Raphanus raphanistrum] (18) | | | | | | | | /------------- RrC26720_p1 [Raphanus raphanistrum] (33) | | \-----100----+------78-----+ | | | \------------- Rsa1.0_06830.1_g00003.1 [Raphanus sativus] (35) \-----100----+ | | \--------------------------- Rsa1.0_30641.1_g00001.1 [Raphanus sativus] (38) | | /------------- XP_013598692.1 [Brassica oleracea] (19) \-------------------95-------------------+ \------------- GSBRNA2T00027817001 [Brassica napus] (49) |