PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4714
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Subtree rooted at node 76: /----- Eucgr.A00588.1.p [Eucalyptus grandis] (2) /-100+ | \----- Eucgr.A00584.1.p [Eucalyptus grandis] (13) /-98-+ | \---------- EcC003592.20 [Eucalyptus camaldulensis] (47) | /--65-+--------------- Eucgr.A00567.1.p [Eucalyptus grandis] (19) | | | \--------------- EcC074126.10 [Eucalyptus camaldulensis] (26) /-100+ | | /----- Eucgr.A00553.1.p [Eucalyptus grandis] (29) | \-------93------+ /-100+ \----- Eucgr.A00580.1.p [Eucalyptus grandis] (41) | | | \-------------------------- Eucgr.C02983.1.p [Eucalyptus grandis] (12) | /-55-+ /----- Neem_1789_f_14 [Azadirachta indica] (5) | | /-100+ | | | \----- Neem_35863_f_1 [Azadirachta indica] (32) | \---------100--------+ | | /----- orange1.1g048459m [Citrus sinensis] (17) | \-100+ | \----- Ciclev10012016m [Citrus clementina] (49) | | /--------------- Cotton_A_32041_BGI-A2_v1.0 [Gossypium arboreum] (4) | | /-97-+ | /----- Gh_D05G1175 [Gossypium hirsutum] (8) | | /-100-+ /-100+ | | | | | \----- Gorai.009G128000.1 [Gossypium raimondii] (51) | | | \-76-+ | | | \---------- Gh_A05G3867 [Gossypium hirsutum] (40) | | /-96-+ | | | | /----- Gh_D05G2606 [Gossypium hirsutum] (6) | | | | /-100+ /-100+ | | | | \----- Gorai.009G288800.1 [Gossypium raimondii] (39) | | | | \----97----+ | | \----97---+ | /----- Cotton_A_03995_BGI-A2_v1.0 [Gossypium arboreum] (28) | | | \-96-+ | | | \----- Gh_A05G2341 [Gossypium hirsutum] (37) /--69-+ | | | | | \-------------------------- Thecc1EG036409t1 [Theobroma cacao] (23) | | | | | \----------------------------------------- evm.model.supercontig_66.19 [Carica papaya] (43) /-100+ | | | \---------------------------------------------- XP_010546689.1 [Tarenaya hassleriana] (24) | | /-94-+ \---------------------------------------------------- XP_010521148.1 [Tarenaya hassleriana] (15) | | | \--------------------------------------------------------- AA31G00129 [Aethionema arabicum] (18) --100+ | /----- KFK41621.1 [Arabis alpina] (30) \---------------------------100--------------------------+ \----- KFK22183.1 [Arabis alpina] (33) Root part of tree: /------------------------------------------------------------------- Rsa1.0_00060.1_g00037.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC1688_p5 [Raphanus raphanistrum] (50) | | /------------------------------ (76) | | | | /------ Csa07g039020.1 [Camelina sativa] (3) | | /-100-+ | | | \------ Csa16g034710.1 [Camelina sativa] (42) | | /-100-+ | /--52--+ | \------------ Csa09g075410.1 [Camelina sativa] (9) | | | /--89-+ | | | | | /------ Carubv10022259m [Capsella rubella] (44) | | | | \----100----+ | | | | \------ Cagra.4006s0023.1.p [Capsella grandiflora] (46) | | | | | | \-100-+ /------------ AT1G72050.2 [Arabidopsis thaliana] (35) | /--92-+ | | | | | | /-100-+ /------ Araha.0408s0004.1.p [Arabidopsis halleri] (45) | | | | | \-100-+ | | | \--76-+ \------ 476336 [Arabidopsis lyrata] (52) + | | | | /--63-+ | \------------------ Bostr.10273s0148.1.p [Boechera stricta] (48) | | | | | | | \------------------------------------- Tp3g26870 [Thellungiella parvula] (11) | /--99-+ | | | | \------------------------------------------- Thhalv10018661m [Eutrema salsugineum] (36) | | | | | \------------------------------------------------- Tp5g27120 [Thellungiella parvula] (31) | | | | /------ XP_013616325.1 [Brassica oleracea] (10) | | /-100-+ | /-100-+ | \------ GSBRNA2T00137272001 [Brassica napus] (38) | | | /-100-+ | | | | | /------ XP_009127893.1 [Brassica rapa] (22) | | | | \-100-+ | | | /-100-+ \------ GSBRNA2T00116449001 [Brassica napus] (34) | | | | | | | | | | /------ Rsa1.0_02754.1_g00005.1 [Raphanus sativus] (14) | | \--------------83--------------+ \----100----+ | | | \------ RrC5310_p2 [Raphanus raphanistrum] (25) \-100-+ | | \------------------------ 676751516 [Sisymbrium irio] (16) | | /------ XP_013589949.1 [Brassica oleracea] (7) | /--99-+ | | \------ GSBRNA2T00062423001 [Brassica napus] (20) | /-100-+ | | \------------ GSBRNA2T00099570001 [Brassica napus] (27) \--------------------53--------------------+ \------------------ XP_009104878.1 [Brassica rapa] (21) |