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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4583
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Subtree rooted at node 93: /----- orange1.1g013222m [Citrus sinensis] (3) /-100+ | \----- Ciclev10011386m [Citrus clementina] (50) /-100+ | | /----- Neem_39829_f_1 [Azadirachta indica] (10) | \-100+ /-------91------+ \----- Neem_3796_f_1 [Azadirachta indica] (16) | | | \--------------- evm.model.supercontig_5.248 [Carica papaya] (23) | | /----- Gh_D03G1371 [Gossypium hirsutum] (7) | /-100+ | | \----- Gorai.003G150700.1 [Gossypium raimondii] (39) | /-100+ | | | /----- Gh_A03G0210 [Gossypium hirsutum] (25) | | \-100+ /-100+ /-100-+ \----- Cotton_A_04174_BGI-A2_v1.0 [Gossypium arboreum] (43) | | | | | | | \--------------- Thecc1EG042240t1 [Theobroma cacao] (53) | | | | | | /----- Ciclev10000654m [Citrus clementina] (20) | | /-100+ /-100+ | | | | | \----- orange1.1g011483m [Citrus sinensis] (41) | | | | /-100+ | | | | | \---------- Neem_10925_f_1 [Azadirachta indica] (30) | | | \--83-+ /-100+ \-95-+ | /----- Eucgr.B04010.1.p [Eucalyptus grandis] (21) | | | \----98---+ | | | \----- evm.model.supercontig_2.345 [Carica papaya] (40) | | | | | \-------------------------- Eucgr.K02940.1.p [Eucalyptus grandis] (33) | | | | /----- Gh_D04G1318 [Gossypium hirsutum] (17) | | /-99-+ /-100+ | | \----- Gorai.012G119600.1 [Gossypium raimondii] (46) | | \-----------100-----------+ | | | /----- Cotton_A_03426_BGI-A2_v1.0 [Gossypium arboreum] (42) | | \-100+ | | \----- Gh_Sca005978G01 [Gossypium hirsutum] (54) /-100-+ | | | | /----- XP_010529128.1 [Tarenaya hassleriana] (19) | | \----------------100----------------+ | | \----- XP_010553206.1 [Tarenaya hassleriana] (29) /-97-+ | | | \---------------------------------------------- AA246G00009 [Aethionema arabicum] (45) | | | \---------------------------------------------------- KFK36740.1 [Arabis alpina] (55) | | /----- 482857 [Arabidopsis lyrata] (5) /-70-+ /-100+ | | | \----- Araha.10219s0008.1.p [Arabidopsis halleri] (36) | | /------100------+ | | | \---------- AT2G38470.1 [Arabidopsis thaliana] (32) | | | | \--------------100-------------+ /--------------------- Bostr.23794s0221.1.p [Boechera stricta] (9) | | | | | | /----- Cagra.2692s0006.1.p [Capsella grandiflora] (12) | \-100+ /---100---+ --94-+ | | \----- Carubv10023006m [Capsella rubella] (34) | | | | \--56-+ /----- Csa04g052260.1 [Camelina sativa] (31) | | /-91-+ | | | \----- Csa06g041320.1 [Camelina sativa] (37) | \-100+ | \---------- Csa05g014650.1 [Camelina sativa] (49) | \-------------------------------------------------------------- Thhalv10016542m [Eutrema salsugineum] (38) Root part of tree: /------------------------------------------------------------------- XP_009141743.1 [Brassica rapa] (1) | |------------------------------------------------------------------- GSBRNA2T00005371001 [Brassica napus] (26) | | /----------------- Rsa1.0_03545.1_g00004.1 [Raphanus sativus] (2) | | | /-------70------+ /-------- RrC14697_p2 [Raphanus raphanistrum] (8) | | \---75---+ | | \-------- GSBRNA2T00091511001 [Brassica napus] (15) | | | | /-------- XP_013631647.1 [Brassica oleracea] (13) | /---100--+ /---100--+ | | | | \-------- GSBRNA2T00152815001 [Brassica napus] (44) | | | /---96--+ | | | | \----------------- GSBRNA2T00046810001 [Brassica napus] (47) | | \--100--+ | | \------------------------- XP_009143383.1 [Brassica rapa] (27) | | + | /-------- (93) | /--100--+ /---67---+ | | | | \-------- Tp4g20800 [Thellungiella parvula] (22) | | | /-------78------+ | | | | \----------------- 676721566 [Sisymbrium irio] (48) | | | | | | | | /-------- XP_009133259.1 [Brassica rapa] (4) | | | | /---100--+ | | \---100--+ | \-------- GSBRNA2T00124850001 [Brassica napus] (11) | | | /--100--+ | /---100--+ | | | /-------- GSBRNA2T00079135001 [Brassica napus] (18) | | | | | \---100--+ | | | \--100--+ \-------- XP_013625082.1 [Brassica oleracea] (51) | | | | | | | | /-------- RrC169_p7 [Raphanus raphanistrum] (24) | | | \-------100------+ | | | \-------- Rsa1.0_00539.1_g00010.1 [Raphanus sativus] (35) \--100--+ | | | /-------- RrC2709_p3 [Raphanus raphanistrum] (6) | \-------------------100-------------------+ | \-------- Rsa1.0_03437.1_g00004.1 [Raphanus sativus] (28) | | /-------- GSBRNA2T00093668001 [Brassica napus] (14) \------------------------100-----------------------+ \-------- XP_013637529.1 [Brassica oleracea] (52) |