PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3567
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Subtree rooted at node 102: /---------- AT2G30590.1 [Arabidopsis thaliana] (5) | /----100---+ /----- Araha.1192s0011.1.p [Arabidopsis halleri] (31) | \-100+ | \----- 902048 [Arabidopsis lyrata] (42) | /-99-+ /----- Carubv10023424m [Capsella rubella] (9) | | /---100---+ | | | \----- Cagra.0567s0023.1.p [Capsella grandiflora] (12) | | | | \-100-+ /----- Csa16g014270.1 [Camelina sativa] (20) /--------100--------+ | /-97-+ | | | | \----- Csa07g012500.1 [Camelina sativa] (33) | | \-100+ | | \---------- Csa05g032070.1 [Camelina sativa] (54) | | | \-------------------------- Bostr.24513s0175.1.p [Boechera stricta] (60) | | /----------------------------------------- Thhalv10016852m [Eutrema salsugineum] (7) | | | | /----- GSBRNA2T00142136001 [Brassica napus] (10) /--95-+ | /-84-+ | | | | \----- XP_009132745.1 [Brassica rapa] (29) | | | /-97-+ | | | | | /----- GSBRNA2T00024504001 [Brassica napus] (15) | | | | \-100+ | | | /------100------+ \----- XP_013630723.1 [Brassica oleracea] (40) | | | | | | | | | \--------------- RrC22884_p1 [Raphanus raphanistrum] (11) | | | | | \-100+ | /--------------------- Rsa1.0_00407.1_g00022.1 [Raphanus sativus] (16) | | | | | | /-53-+ | /----- GSBRNA2T00043420001 [Brassica napus] (17) | | | | | /-100+ | | | | /-100+ | \----- XP_009141082.1 [Brassica rapa] (19) | | | | | | /-100+ | | | | | | | \---------- XP_013630909.1 [Brassica oleracea] (51) | | | \-51-+ \-100-+ | | | | \--------------- GSBRNA2T00105113001 [Brassica napus] (22) /-99-+ | | | | | | | \-------------------------- Tp4g13140 [Thellungiella parvula] (35) | | | | | | \-99-+ /----- GSBRNA2T00086777001 [Brassica napus] (25) | | | /-100+ | | | | \----- XP_013631795.1 [Brassica oleracea] (39) | | | /-64-+ | | | | \---------- GSBRNA2T00048564001 [Brassica napus] (26) | | | /-100-+ | | | | \--------------- XP_009144287.1 [Brassica rapa] (44) /-100+ | | /-100+ | | | | | | /----- RrC262_p2 [Raphanus raphanistrum] (45) | | | | | \------100------+ | | | \----70---+ \----- Rsa1.0_06392.1_g00001.1 [Raphanus sativus] (58) | | | | | | | \-------------------------- 676729212 [Sisymbrium irio] (46) --100+ | | | | \---------------------------------------------------- KFK23321.1 [Arabis alpina] (18) | | | \--------------------------------------------------------- AA32G00648 [Aethionema arabicum] (59) | | /----- XP_010542706.1 [Tarenaya hassleriana] (8) \---------------------------100--------------------------+ \----- XP_010557165.1 [Tarenaya hassleriana] (52) Root part of tree: /------------------------------------------------------------------- Gorai.004G219400.1 [Gossypium raimondii] (1) | | /------ Eucgr.B01503.1.p [Eucalyptus grandis] (2) | /---------100---------+ | | \------ EcC002771.20 [Eucalyptus camaldulensis] (61) | | | | /------ Neem_10315_f_3 [Azadirachta indica] (6) | /-99-+ /------100------+ | | | | \------ Neem_30360_f_2 [Azadirachta indica] (38) | | | | | | \-100-+ /----------------- evm.model.supercontig_1244.3 [Carica papaya] (41) | | | | | | | | /------ Gorai.007G278400.1 [Gossypium raimondii] (48) | | \-95-+ /-100+ | /--92-+ | | \------ Gh_A11G2258 [Gossypium hirsutum] (55) | | | \-100-+ | | | \----------- Thecc1EG026314t1 [Theobroma cacao] (49) | | | | | | /------ orange1.1g018654m [Citrus sinensis] (23) | | | /-100+ | | | | \------ Ciclev10020867m [Citrus clementina] (24) | /-100-+ \---------100---------+ | | | | /------ Neem_11122_f_2 [Azadirachta indica] (50) | | | \-100+ | | | \------ Neem_36183_f_1 [Azadirachta indica] (57) | | | | | | /------ (102) | /-99-+ \---------------88---------------+ | | | \------ evm.model.supercontig_52.143 [Carica papaya] (56) + | | | | | /------ Gorai.013G104500.1 [Gossypium raimondii] (14) | | | /-100+ | | | | \------ Gh_D07G2135 [Gossypium hirsutum] (47) | /--84-+ \---------------100---------------+ | | | | /------ Gh_A07G1912 [Gossypium hirsutum] (27) | | | \-100+ | | | \------ Cotton_A_05980_BGI-A2_v1.0 [Gossypium arboreum] (53) | | | | | \-------------------------------------------------- Thecc1EG004187t1 [Theobroma cacao] (3) | /-100+ | | | /------ Cotton_A_26559_BGI-A2_v1.0 [Gossypium arboreum] (21) | | | /-100+ | | | | \------ Gh_A11G1172 [Gossypium hirsutum] (43) | | | /-100-+ | | | | \----------- Gh_D11G1328 [Gossypium hirsutum] (28) |-100-+ \------------------100-----------------+ | | \----------------- Gorai.007G142800.1 [Gossypium raimondii] (36) | | | | /------ Gh_Sca005611G01 [Gossypium hirsutum] (13) | | /-100+ | | | \------ Cotton_A_20682_BGI-A2_v1.0 [Gossypium arboreum] (30) | \-----------------------100-----------------------+ | | /------ Gh_D08G2032 [Gossypium hirsutum] (32) | \-100+ | \------ Gorai.004G219300.1 [Gossypium raimondii] (37) | | /------ Cotton_A_20681_BGI-A2_v1.0 [Gossypium arboreum] (4) \-----------------------------100----------------------------+ \------ Gh_Sca005611G02 [Gossypium hirsutum] (34) |