![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3349
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 103: /---------- AT1G17590.1 [Arabidopsis thaliana] (2) | /------100------+ /----- Araha.15627s0018.1.p [Arabidopsis halleri] (3) | \-100+ | \----- 471968 [Arabidopsis lyrata] (50) | | /----- GSBRNA2T00016247001 [Brassica napus] (5) | /-100+ /-100+ | \----- XP_009117651.1 [Brassica rapa] (37) | | /-100+ | | | | /----- XP_013601803.1 [Brassica oleracea] (26) | | | \-100+ | | /--80-+ \----- GSBRNA2T00136782001 [Brassica napus] (39) /-----------100-----------+ | | | | | \-100+ \--------------- 676727140 [Sisymbrium irio] (53) | | | | | \--------------------- Tp1g15720 [Thellungiella parvula] (44) | | | \------------------------------- AA39G00053 [Aethionema arabicum] (11) | | /----- GSBRNA2T00088675001 [Brassica napus] (4) | /-100+ | | \----- XP_009127954.1 [Brassica rapa] (33) | /-100+ | | | /----- XP_013613932.1 [Brassica oleracea] (15) | | \-100+ | /--82-+ \----- GSBRNA2T00137180001 [Brassica napus] (34) | | | | | | /----- Rsa1.0_01855.1_g00009.1 [Raphanus sativus] (47) | | \---100---+ | | \----- RrC6992_p1 [Raphanus raphanistrum] (60) | | | /-90-+ /----- GSBRNA2T00003651001 [Brassica napus] (40) | | | /-100+ | | | | \----- XP_013591675.1 [Brassica oleracea] (55) | | | /-100+ | | | | \---------- XP_009104842.1 [Brassica rapa] (43) | | \-100-+ | | | /----- RrC14313_p1 [Raphanus raphanistrum] (48) | | \---100---+ | /-81-+ \----- Rsa1.0_00060.1_g00008.1 [Raphanus sativus] (57) | | | | | | /----- RrC19079_p1 [Raphanus raphanistrum] (8) | | | /------100------+ | | | | \----- Rsa1.0_00046.1_g00028.1 [Raphanus sativus] (58) /-95-+ | | | | | | | | /----- XP_009105949.1 [Brassica rapa] (14) | | | \-97-+ /----99---+ | | | | | \----- GSBRNA2T00102603001 [Brassica napus] (36) | | /-72-+ | | | | | | \--97-+ /----- XP_013588662.1 [Brassica oleracea] (27) | | | | | /-100+ | | | | | | \----- GSBRNA2T00103376001 [Brassica napus] (61) | | | | \-93-+ | | | | | /----- XP_013590425.1 [Brassica oleracea] (45) | | /-100+ | \-90-+ | | | | | \----- GSBRNA2T00103373001 [Brassica napus] (51) | | | | | | | | | \------------------------------- Tp5g27870 [Thellungiella parvula] (46) | | | | | | | \------------------------------------ 676751286 [Sisymbrium irio] (42) | | | | | | /----- Cagra.1013s0019.1.p [Capsella grandiflora] (13) | | | /---100---+ | | /-61-+ | \----- Carubv10020596m [Capsella rubella] (17) --95-+ | | | | | | | | /--95-+ /----- Csa07g039940.1 [Camelina sativa] (35) | | | | | | /-81-+ | | | | | | | \----- Csa09g077380.1 [Camelina sativa] (56) | | | | /-95-+ \-95-+ | | | | | | \---------- Csa16g035520.1 [Camelina sativa] (38) | | | | | | | | /--95-+ | | \--------------------- Bostr.10273s0069.1.p [Boechera stricta] (32) | | | | \------95------+ | | | | | /----- Araha.27996s0003.1.p [Arabidopsis halleri] (16) | | | | | /-100+ | | | | | | \----- 339498 [Arabidopsis lyrata] (24) | \-95-+ | \------100------+ | | | \---------- AT1G72830.2 [Arabidopsis thaliana] (25) | | | | | \---------------------------------------------- Thhalv10018869m [Eutrema salsugineum] (12) | | | \---------------------------------------------------- AA31G00656 [Aethionema arabicum] (52) | \-------------------------------------------------------------- XP_010540079.1 [Tarenaya hassleriana] (10) Root part of tree: /------------------------------------------------------------------- EcS779080.10 [Eucalyptus camaldulensis] (1) | |------------------------------------------------------------------- Eucgr.F03169.1.p [Eucalyptus grandis] (49) | | /----------------------------------------------------------- (103) | | | | /-------- Cotton_A_08538_BGI-A2_v1.0 [Gossypium arboreum] (6) | | /---100--+ | | | \-------- Gh_A10G0482 [Gossypium hirsutum] (41) + | /--100--+ | | | | /-------- Gh_D10G0506 [Gossypium hirsutum] (18) | | | \---99---+ | | | \-------- Gorai.011G057600.1 [Gossypium raimondii] (29) | | /---53--+ | | | | /-------- Gh_A05G1140 [Gossypium hirsutum] (19) | | | | /---57---+ | | | | | \-------- Cotton_A_02671_BGI-A2_v1.0 [Gossypium arboreum] (30) | | | \--100--+ \---78--+ | | /-------- Gorai.009G143800.1 [Gossypium raimondii] (23) | /---89---+ \---100--+ | | | \-------- Gh_D05G1315 [Gossypium hirsutum] (54) | | | | | | /-------- Gh_A05G3523 [Gossypium hirsutum] (9) | | | /---100--+ | | | | \-------- Cotton_A_06049_BGI-A2_v1.0 [Gossypium arboreum] (59) | /--100--+ \------100------+ | | | | /-------- Gh_D04G0086 [Gossypium hirsutum] (21) | | | \---99---+ | | | \-------- Gorai.012G010900.1 [Gossypium raimondii] (28) | | | | | \------------------------------------------ Thecc1EG029103t1 [Theobroma cacao] (31) | | \---88---+ /-------- orange1.1g019782m [Citrus sinensis] (7) | /---100--+ | | \-------- Ciclev10026020m [Citrus clementina] (62) |---------------99---------------+ | \----------------- Neem_8501_f_5 [Azadirachta indica] (20) | \-------------------------------------------------- evm.model.supercontig_25.96 [Carica papaya] (22) |