![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2997
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 105: /----- Carubv10009894m [Capsella rubella] (2) /-100+ | \----- Cagra.0909s0019.1.p [Capsella grandiflora] (44) /-86-+ | \---------- Csa03g022220.1 [Camelina sativa] (41) /--97-+ | | /----- Csa17g024170.1 [Camelina sativa] (31) | \----89---+ /-99-+ \----- Csa14g023660.1 [Camelina sativa] (51) | | | \--------------------- Bostr.7128s0442.1.p [Boechera stricta] (39) /-99-+ | | /----- AT1G18400.1 [Arabidopsis thaliana] (26) | \---------82---------+ | \----- Araha.3597s0006.1.p [Arabidopsis halleri] (28) | | /--------------------- 676727278 [Sisymbrium irio] (4) | | | | /----- XP_013584176.1 [Brassica oleracea] (5) /-52-+ | /-100+ | | | | \----- GSBRNA2T00044041001 [Brassica napus] (54) | | /-97-+ | | | | | /-100+---------- GSBRNA2T00034819001 [Brassica napus] (48) | | | | | | | | | | | \---------- XP_009149281.1 [Brassica rapa] (50) | | | \-100-+ /------100------+ \-100+ | /----- Rsa1.0_00360.1_g00004.1 [Raphanus sativus] (47) | | | \---100---+ | | | \----- RrC9679_p1 [Raphanus raphanistrum] (59) | | | | | \-------------------------- Tp1g16350 [Thellungiella parvula] (10) | | | | /----- Thhalv10008517m [Eutrema salsugineum] (13) | \--------------52--------------+ | \----- KFK43999.1 [Arabis alpina] (46) | | /------------------------------------ KFK41823.1 [Arabis alpina] (3) | | | | /----- GSBRNA2T00082839001 [Brassica napus] (7) | | /-95-+ | | | \----- XP_013619386.1 [Brassica oleracea] (8) | | /---------100--------+ | | | | /----- XP_009128012.1 [Brassica rapa] (19) | | | \-99-+ | /-86-+ | \----- GSBRNA2T00088013001 [Brassica napus] (55) | | | | | | | | /----- GSBRNA2T00103461001 [Brassica napus] (15) | | | | | | | | | |----- GSBRNA2T00058707001 [Brassica napus] (25) | | | | /-100+ /-100+ | | | | |----- XP_013590557.1 [Brassica oleracea] (40) | | | | | | | | | | \-100+ /-80-+ \----- XP_009106040.1 [Brassica rapa] (63) | | | | | | | | | | /-100-+ \---------- RrC9086_p3 [Raphanus raphanistrum] (22) | | | | | | | | | | | \--------------- Rsa1.0_00939.1_g00015.1 [Raphanus sativus] (61) | | | | | | | | | | /----- RrC5921_p1 [Raphanus raphanistrum] (49) | | | | /-92-+ /-100+ | | | | | | | \----- Rsa1.0_12047.1_g00001.1 [Raphanus sativus] (53) | | | | | |----93----+ | | /-98-+ | | | \---------- Tp5g29030 [Thellungiella parvula] (57) | | | | \-82-+ | | | | | | \--------------------- 676751522 [Sisymbrium irio] (65) | | | | | | | | | \-------------------------- Thhalv10019010m [Eutrema salsugineum] (20) | | | | | | | | /----- Carubv10020802m [Capsella rubella] (6) /-100+ | | | /---100---+ | | | | | | \----- Cagra.0876s0016.1.p [Capsella grandiflora] (58) | | | | | | | | | | | /--97-+ /----- Csa16g037700.1 [Camelina sativa] (17) | | | | | | | /-100+ | | \--61-+ | | | | \----- Csa07g043020.1 [Camelina sativa] (33) | | | | /-98-+ \-100+ | | | | | | \---------- Csa09g078400.1 [Camelina sativa] (34) | | | | | | | | | | | \--------------------- Bostr.3288s0027.1.p [Boechera stricta] (52) | | | \------98------+ --91-+ | | | /----- Araha.2287s0004.1.p [Arabidopsis halleri] (14) | | | | /-100+ | | | | | \----- 476520 [Arabidopsis lyrata] (16) | | | \------100------+ | | | \---------- AT1G73830.1 [Arabidopsis thaliana] (27) | | | | | \---------------------------------------------- AA31G00559 [Aethionema arabicum] (11) | | | \--------------------------------------------------------- XP_010537453.1 [Tarenaya hassleriana] (62) | \-------------------------------------------------------------- Eucgr.B00731.1.p [Eucalyptus grandis] (37) Root part of tree: /------------------------------------------------------------------- Gh_A09G1589 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Cotton_A_34289_BGI-A2_v1.0 [Gossypium arboreum] (56) | | /------------------------------ (105) | | | | /------- orange1.1g024653m [Citrus sinensis] (18) | | /--100--+ | /--56--+ | \------- Ciclev10024155m [Citrus clementina] (21) | | | /--100-+ | | | | | /------- Neem_27763_f_1 [Azadirachta indica] (24) | | | | \--100--+ | /--100--+ \---99--+ \------- Neem_16026_f_1 [Azadirachta indica] (64) | | | | | | | \---------------------- Eucgr.K02229.1.p [Eucalyptus grandis] (23) | | | + | \------------------------------------- evm.model.supercontig_3.503 [Carica papaya] (32) | | | | /------- Gh_D07G0665 [Gossypium hirsutum] (9) | | /--100--+ | /--89--+ | \------- Gorai.001G074900.1 [Gossypium raimondii] (12) | | | /--84--+ | | | | \--------------- Gh_A07G0598 [Gossypium hirsutum] (38) | | | /--100--+ | | | | \---------------------- Cotton_A_29988_BGI-A2_v1.0 [Gossypium arboreum] (45) | | | | | | | | /------- Gorai.006G060400.1 [Gossypium raimondii] (35) | /--100--+ \------93------+ /---93--+ | | | | | \------- Gh_D09G0484 [Gossypium hirsutum] (43) | | | | | | | | \------100-----+--------------- Gh_A09G0477 [Gossypium hirsutum] (36) | | | | \--98--+ | \--------------- Cotton_A_36849_BGI-A2_v1.0 [Gossypium arboreum] (60) | | | \---------------------------------------------------- Thecc1EG012362t1 [Theobroma cacao] (29) | | /------- Gorai.006G194500.1 [Gossypium raimondii] (30) \-------------------------96-------------------------+ \------- Gh_D09G1679 [Gossypium hirsutum] (42) |