PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2760
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 102: /----- AT5G24930.1 [Arabidopsis thaliana] (2) /-------94------+ | \----- 489353 [Arabidopsis lyrata] (38) | | /----- Carubv10001230m [Capsella rubella] (31) /-51-+ /----97---+ | | | \----- Cagra.11928s0002.1.p [Capsella grandiflora] (44) | | | | \--76-+ /----- Csa13g030740.1 [Camelina sativa] (41) | | /-93-+ /-70-+ | | \----- Csa20g046110.1 [Camelina sativa] (64) | | \-95-+ | | \---------- Csa08g022520.1 [Camelina sativa] (45) | | | \-------------------------- Bostr.5763s0023.1.p [Boechera stricta] (48) | |------------------------------- KFK27763.1 [Arabis alpina] (5) | | /----- GSBRNA2T00146006001 [Brassica napus] (7) | /-93-+ | | \----- XP_013611790.1 [Brassica oleracea] (53) | /-82-+ | | | /----- GSBRNA2T00009580001 [Brassica napus] (30) | | \-97-+ |-------76------+ \----- XP_009111648.1 [Brassica rapa] (54) | | /-94-+ \--------------- Rsa1.0_00051.1_g00009.1 [Raphanus sativus] (12) | | | |------------------------------- 676779348 [Sisymbrium irio] (17) | | | |------------------------------- RrC14814_p1 [Raphanus raphanistrum] (18) | | | | /---------- GSBRNA2T00133568001 [Brassica napus] (21) | | | | | /-87-+ /----- XP_009151020.1 [Brassica rapa] (43) /-100+ | | \-95-+ | | |-------88------+ \----- GSBRNA2T00147590001 [Brassica napus] (46) | | | | | | | \--------------- Rsa1.0_00810.1_g00007.1 [Raphanus sativus] (35) | | | | | |------------------------------- Thhalv10004744m [Eutrema salsugineum] (39) /-100+ | | | | | \------------------------------- Tp2g22520 [Thellungiella parvula] (60) | | | | | \------------------------------------ AA12G00056 [Aethionema arabicum] (36) | | | | /----- XP_010541548.1 [Tarenaya hassleriana] (13) | \----------------100----------------+ | \----- XP_010525560.1 [Tarenaya hassleriana] (58) | | /------------------------------------ Eucgr.C01876.1.p [Eucalyptus grandis] (4) | | /--54-+ | /----- Cotton_A_19228_BGI-A2_v1.0 [Gossypium arboreum] (6) | | | /-100+ | | | | \----- Gh_A07G0278 [Gossypium hirsutum] (62) | | | /----100---+ | | | | | /----- Gh_D07G0334 [Gossypium hirsutum] (10) | | | | \-72-+ | | | | \----- Gorai.001G039500.1 [Gossypium raimondii] (24) | | | /-79-+ | | | | | /--------------- Cotton_A_01142_BGI-A2_v1.0 [Gossypium arboreum] (20) | | | | | | | \----55---+ | | | /----- Gorai.009G065600.1 [Gossypium raimondii] (29) | | | \-100-+ /-100+ | | /-62-+ | | \----- Gh_D05G0635 [Gossypium hirsutum] (61) | | | | \-51-+ | | | | \---------- Gh_A05G0516 [Gossypium hirsutum] (65) | | | | | | | \-------------------------- Thecc1EG036860t1 [Theobroma cacao] (37) | | | /-53-+ | | /----- orange1.1g019028m [Citrus sinensis] (14) | | | | /-95-+ | | | | | \----- Ciclev10008813m [Citrus clementina] (51) | | | |---------59---------+ | | \-56-+ \---------- Neem_960_f_4 [Azadirachta indica] (40) | | | | | | /----- Gh_A13G1580 [Gossypium hirsutum] (16) | | | /-100+ | | | | \----- Cotton_A_09109_BGI-A2_v1.0 [Gossypium arboreum] (32) | | |---------100--------+ /-100+ | | | /----- Gh_D13G1939 [Gossypium hirsutum] (50) | | | | \-88-+ | | | | \----- Gorai.010G245200.1 [Gossypium raimondii] (57) | | | | | | | \------------------------------- evm.model.supercontig_1332.1 [Carica papaya] (63) | | | --100+ | | /----- EcC068115.10 [Eucalyptus camaldulensis] (15) | | \----------------------80----------------------+ | | \----- RrC29514_p1 [Raphanus raphanistrum] (42) | | | \--------------------------------------------------------- XP_010548562.1 [Tarenaya hassleriana] (49) | \-------------------------------------------------------------- AA399G00003 [Aethionema arabicum] (9) Root part of tree: /------------------------------------------------------------------- Cagra.1004s0003.1.p [Capsella grandiflora] (1) | |------------------------------------------------------------------- Carubv10023746m [Capsella rubella] (23) | | /--------------------------------- (102) | | | | /------ XP_009140597.1 [Brassica rapa] (3) | | /-100+ | | | \------ GSBRNA2T00082326001 [Brassica napus] (8) | | /-100-+ | | | | /------ GSBRNA2T00060034001 [Brassica napus] (34) | /--91-+ | \-100+ | | | /-100+ \------ XP_013631409.1 [Brassica oleracea] (59) | | | | | | | | | | /------ RrC34928_p1 [Raphanus raphanistrum] (26) | | | /--99-+ \----100---+ + | | | | \------ Rsa1.0_00754.1_g00013.1 [Raphanus sativus] (28) | /-100-+ | | | | | | \-58-+ \---------------------- 676733992 [Sisymbrium irio] (22) | | | | | | | \---------------------------- Tp4g03750 [Thellungiella parvula] (27) | /-100+ | | | | \--------------------------------------- Thhalv10000258m [Eutrema salsugineum] (47) | | | | /--97-+ \--------------------------------------------- KFK32611.1 [Arabis alpina] (56) | | | | | | /------ AT2G24790.1 [Arabidopsis thaliana] (25) | /-100+ \--------------------100--------------------+ | | | \------ 481339 [Arabidopsis lyrata] (52) | | | | | \-------------------------------------------------------- Bostr.8705s0012.1.p [Boechera stricta] (11) \-100-+ | /------ Csa16g046500.1 [Camelina sativa] (19) | | \--------------------------100-------------------------+------ Csa07g054870.1 [Camelina sativa] (33) | \------ Csa09g090020.1 [Camelina sativa] (55) |