PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2592
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 122: /----- Gh_D11G0213 [Gossypium hirsutum] (4) /-100+ | \----- Gorai.007G023500.1 [Gossypium raimondii] (64) /-100+ | | /----- Cotton_A_28763_BGI-A2_v1.0 [Gossypium arboreum] (30) | \-100+ | \----- Gh_A11G0202 [Gossypium hirsutum] (52) /-100-+ | | /----- Cotton_A_25970_BGI-A2_v1.0 [Gossypium arboreum] (29) | | /-100+ | | | \----- Gh_A08G1636 [Gossypium hirsutum] (46) | \-100+ /-100+ | /----- Gorai.004G212200.1 [Gossypium raimondii] (54) | | \-100+ | | \----- Gh_D08G1966 [Gossypium hirsutum] (66) | | /-83-+ \--------------------- Thecc1EG016261t1 [Theobroma cacao] (49) | | | | /---------- Eucgr.D01841.1.p [Eucalyptus grandis] (7) | | | | \-------94------+ /----- Eucgr.E00624.1.p [Eucalyptus grandis] (28) /-72-+ \-100+ | | \----- EcC038312.30 [Eucalyptus camaldulensis] (53) | | | | /---------- Neem_5117_f_1 [Azadirachta indica] (18) | | | /-64-+ \---------100--------+ /----- Ciclev10019338m [Citrus clementina] (42) | | \-100+ | | \----- orange1.1g007527m [Citrus sinensis] (56) | | | \------------------------------------ evm.model.supercontig_537.2 [Carica papaya] (60) | /-100+ /----- orange1.1g006217m [Citrus sinensis] (14) | | /-100+ | | | \----- Ciclev10019219m [Citrus clementina] (15) | | /-86-+ | | | | /----- Eucgr.D02287.1.p [Eucalyptus grandis] (43) | | | \-100+ /--99-+ \-----------100-----------+ \----- EcS754314.10 [Eucalyptus camaldulensis] (44) | | | | | \--------------- Gh_A11G0796 [Gossypium hirsutum] (55) | | | | /----- XP_010545729.1 [Tarenaya hassleriana] (39) | \-------------------100------------------+ | \----- XP_010553516.1 [Tarenaya hassleriana] (67) | | /----- Csa02g054680.1 [Camelina sativa] (9) | /-99-+ | | \----- Csa10g049840.1 [Camelina sativa] (25) | /-51-+ | | \---------- Bostr.7200s0145.1.p [Boechera stricta] (16) | /-100-+ | | \--------------- Carubv10004345m [Capsella rubella] (11) | | | /------100-----+ /----- 493847 [Arabidopsis lyrata] (26) | | | /-100+ | | | | \----- Araha.2755s0005.1.p [Arabidopsis halleri] (62) | | \----100---+ /-100+ | \---------- AT5G41315.1 [Arabidopsis thaliana] (63) | | | | | | /----- XP_009140081.1 [Brassica rapa] (12) | | | /-100+ | | | | \----- GSBRNA2T00068536001 [Brassica napus] (13) | | | /-100+ | | | | | /----- GSBRNA2T00025350001 [Brassica napus] (38) | | /-84-+ | \-100+ | | | | /-100-+ \----- XP_013632341.1 [Brassica oleracea] (40) | | | | | | | | | | | | /----- RrC844_p1 [Raphanus raphanistrum] (32) | | | | /-100+ \---100---+ | | | | | | \----- Rsa1.0_00260.1_g00010.1 [Raphanus sativus] (34) /-100+ | | | | | | | | | | /-100+ \--------------------- 676738388 [Sisymbrium irio] (19) | | | /-100+ | | | | | | | | | | | /----- Tp7g00630 [Thellungiella parvula] (22) | | | | | \-100+ \---------100--------+ | | | | | | \----- Tp_un0010_011 [Thellungiella parvula] (58) | | | | | | | | \-100-+ | \------------------------------- Thhalv10027709m [Eutrema salsugineum] (51) | | | | | | | \----------------------------------------- KFK33021.1 [Arabis alpina] (61) | | | | | \---------------------------------------------- AA87G00064 [Aethionema arabicum] (35) | | | \--------------------------------------------------------- AA53G01357 [Aethionema arabicum] (10) --100+ | /---------- Csa16g056360.1 [Camelina sativa] (5) | | | /-100+ /----- Csa09g098460.1 [Camelina sativa] (8) | | \-100+ | | \----- Csa07g065130.1 [Camelina sativa] (36) | /--98-+ | | | /----- Cagra.2104s0007.1.p [Capsella grandiflora] (6) | | \---100---+ | /-100+ \----- Carubv10019965m [Capsella rubella] (41) | | | | | \--------------------- Bostr.29223s0199.1.p [Boechera stricta] (27) | | \----------------100----------------+ /----- 474990 [Arabidopsis lyrata] (20) | /-100+ | | \----- Araha.0740s0005.1.p [Arabidopsis halleri] (57) \------100------+ \---------- AT1G63650.1 [Arabidopsis thaliana] (31) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00056417001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009112931.1 [Brassica rapa] (65) | | /---------- XP_009112753.1 [Brassica rapa] (2) | /---100--+ | | \---------- GSBRNA2T00024962001 [Brassica napus] (48) | /---100---+ | | | /---------- GSBRNA2T00000001001 [Brassica napus] (24) | | \---99---+ | /---100--+ \---------- XP_013606936.1 [Brassica oleracea] (45) | | | | | | /---------- Rsa1.0_09229.1_g00001.1 [Raphanus sativus] (3) + | \--------100-------+ | | \---------- RrC3963_p1 [Raphanus raphanistrum] (37) | | | /---100---+ /---------- (122) | | | /---100--+ | | | | \---------- Thhalv10023356m [Eutrema salsugineum] (50) | | | /---100---+ | | | | \------------------- Tp2g01010 [Thellungiella parvula] (21) | /---100--+ \---78---+ | | | \----------------------------- 676779886 [Sisymbrium irio] (23) | | | | | | /---------- RrC11369_p1 [Raphanus raphanistrum] (33) \----99---+ \-----------------100-----------------+ | \---------- Rsa1.0_03129.1_g00002.1 [Raphanus sativus] (59) | | /---------- GSBRNA2T00032753001 [Brassica napus] (17) \----------------------100---------------------+ \---------- XP_013609174.1 [Brassica oleracea] (47) |