![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM259
Phylogenetic tree for protein ? help Back to Top |
---|
/------------------------------------------------------------------ EcC033255.10 [Eucalyptus camaldulensis] (1) | |------------------------------------------------------------------ Eucgr.J01215.1.p [Eucalyptus grandis] (79) | | /----- Gorai.001G256200.1 [Gossypium raimondii] (2) | /-100-+ | | \----- Gh_D07G2183 [Gossypium hirsutum] (175) | /--------------------100--------------------+ | | | /----- Gh_A07G1964 [Gossypium hirsutum] (126) | | \--91-+ | | \----- Cotton_A_19428_BGI-A2_v1.0 [Gossypium arboreum] (158) | | | | /----- RrC1146_p3 [Raphanus raphanistrum] (3) | | /----79----+ | | | \----- Rsa1.0_00504.1_g00015.1 [Raphanus sativus] (47) | | | | | | /----- GSBRNA2T00040293001 [Brassica napus] (6) | | | /-100-+ | | | | \----- XP_013595899.1 [Brassica oleracea] (134) | | | | | | |-99-+----------- XP_009103115.1 [Brassica rapa] (42) | | | | | | | \----------- GSBRNA2T00069436001 [Brassica napus] (145) | | | | | |---------------- Thhalv10009197m [Eutrema salsugineum] (21) | | | | | |---------------- XP_009110054.1 [Brassica rapa] (22) | | | | | |---------------- Cagra.1150s0003.1.p [Capsella grandiflora] (59) | | | | | |---------------- Araha.5855s0005.1.p [Arabidopsis halleri] (69) | | | | | | /----- 676715348 [Sisymbrium irio] (85) | | |----95----+ | | | \----- Tp1g21830 [Thellungiella parvula] (147) | | | | | |---------------- Carubv10010751m [Capsella rubella] (92) | | | | | /--61-+---------------- Csa03g028500.1 [Camelina sativa] (94) | | | | | | | |---------------- 472704 [Arabidopsis lyrata] (95) | | | | | | | | /----- XP_009115425.1 [Brassica rapa] (100) | | | | | | | | | /-100-+----- GSBRNA2T00090660001 [Brassica napus] (119) | | | | | | | | | | | \----- XP_013584333.1 [Brassica oleracea] (150) | | | |-99-+ | | | | | /----- RrC12925_p1 [Raphanus raphanistrum] (174) | | | | \--99-+ | | | | \----- Rsa1.0_01362.1_g00006.1 [Raphanus sativus] (250) | | | | | | /-95-+ |---------------- AT1G26945.1 [Arabidopsis thaliana] (127) | | | | | | | | | |---------------- Csa17g033830.1 [Camelina sativa] (129) | | | | | | | | | |---------------- GSBRNA2T00083979001 [Brassica napus] (133) | | | | | | | | | |---------------- KFK44602.1 [Arabis alpina] (164) | | | | | | | /----------84---------+ | |---------------- Bostr.12659s0300.1.p [Boechera stricta] (180) | | | | | | | | | | | \---------------- XP_013602228.1 [Brassica oleracea] (184) | | | | | | | | | | /----- XP_010552588.1 [Tarenaya hassleriana] (84) | | | | \-------97-------+ | | | | \----- XP_010551523.1 [Tarenaya hassleriana] (223) | | | | | | | \--------------------------- evm.model.supercontig_183.32 [Carica papaya] (210) | | | | | | /----- orange1.1g048534m [Citrus sinensis] (4) | | | /-100-+ | | | | \----- Ciclev10023072m [Citrus clementina] (74) | | | | | | |-----------------100-----------------+----------- Neem_34052_f_1 [Azadirachta indica] (16) | | | | | | | \----------- Neem_796_f_4 [Azadirachta indica] (194) | | | | | | /----------- Gorai.005G139900.1 [Gossypium raimondii] (5) | | | | | | | | /----- Gh_A03G0864 [Gossypium hirsutum] (63) | | | /-100+-100-+ | | | | | \----- Cotton_A_35715_BGI-A2_v1.0 [Gossypium arboreum] (128) | | | | | | | | | \----------- Gh_D02G1245 [Gossypium hirsutum] (168) | | |---------------66---------------+ | | | | /----- Cotton_A_27959_BGI-A2_v1.0 [Gossypium arboreum] (7) | | | | /--67-+ | | | | | \----- Gh_A13G0641 [Gossypium hirsutum] (173) | | | \-100+ | | | | /----- Gorai.013G083800.1 [Gossypium raimondii] (27) | | | \-100-+ | | | \----- Gh_D13G0759 [Gossypium hirsutum] (39) | | | | | | /----- Carubv10019148m [Capsella rubella] (8) | | | /-100-+ | | | | \----- Cagra.1659s0013.1.p [Capsella grandiflora] (146) | | | /-90-+ | | | | \----------- Bostr.18473s0186.1.p [Boechera stricta] (117) | | | | | | | |---------------- Araha.10778s0003.1.p [Arabidopsis halleri] (36) | | | /--99-+ | | | | | /----- Csa04g030640.1 [Camelina sativa] (60) | | | | | | | | | | \----99----+----- Csa06g021340.1 [Camelina sativa] (89) | | | /-90-+ | | | | | | \----- Csa09g048090.1 [Camelina sativa] (171) | | | | | | | | | \---------------------- AT3G47710.1 [Arabidopsis thaliana] (26) | | | | | | | | /----------- Rsa1.0_05929.1_g00001.1 [Raphanus sativus] (17) | | | | | | | | | | /----- GSBRNA2T00024766001 [Brassica napus] (76) | | | | |--97-+ | | | | | \----- XP_013627799.1 [Brassica oleracea] (166) | | | | | | | | |-------55------+----------- Rsa1.0_05101.1_g00002.1 [Raphanus sativus] (165) | | | | | | | | /--58-+ |----------- RrC108_p4 [Raphanus raphanistrum] (197) | | | | | | | | | | | | /----- GSBRNA2T00063076001 [Brassica napus] (200) | | | | | \--66-+ | | | | | \----- XP_009149879.1 [Brassica rapa] (222) | | | | | | | | | |--------------------------- Tp5g14210 [Thellungiella parvula] (44) | | | | | | | | /-99-+ |--------------------------- KFK34072.1 [Arabis alpina] (144) | | | | | | | | | | | |--------------------------- 676719646 [Sisymbrium irio] (167) | | | | | | | | | | | \--------------------------- Thhalv10010858m [Eutrema salsugineum] (260) | | | | | | | | | | /----- XP_010550611.1 [Tarenaya hassleriana] (290) | | | | \------------100------------+ | | | /--66-+ \----- XP_010547809.1 [Tarenaya hassleriana] (217) | | | | | | | | | | /----- Neem_23857_f_2 [Azadirachta indica] (30) | | | | | /-100-+ | | | | | | \----- Neem_1618_f_8 [Azadirachta indica] (56) | | | | | /-100+ | | | | | | \----------- Ciclev10024517m [Citrus clementina] (155) | | | | \---------100---------+ | | | | \---------------- Eucgr.K02466.1.p [Eucalyptus grandis] (193) | | | | | | | | /----- AA31G00496 [Aethionema arabicum] (34) | | | | | | | | | |----- Csa07g045910.1 [Camelina sativa] (113) | | | | /----82----+ | | | | | |----- Csa16g038450.1 [Camelina sativa] (181) | | | | | | | | | | | \----- Csa09g079090.1 [Camelina sativa] (280) | | | | | | | | | | /----- XP_013619875.1 [Brassica oleracea] (37) | | | | | | | | | | | |----- XP_009128048.1 [Brassica rapa] (140) | | | | | /-100-+ | | | | | | |----- RrC21801_p1 [Raphanus raphanistrum] (162) | | | | | | | | | | | |-96-+ \----- GSBRNA2T00088861001 [Brassica napus] (196) | |--89-+ | /--85-+ | | | | | | | \----------- AT1G74500.1 [Arabidopsis thaliana] (135) | | | | | | | | | | | |---------------- Bostr.3288s0096.1.p [Boechera stricta] (68) | | | | | | | | | | | |---------------- Araha.5006s0004.1.p [Arabidopsis halleri] (180) | | |-81-+ | | | | | | | |---------------- 476585 [Arabidopsis lyrata] (111) | | | | | | | | | | | |---------------- Cagra.0402s0075.1.p [Capsella grandiflora] (143) + | | | | | | | | | | \---------------- Carubv10021619m [Capsella rubella] (214) | | | | | | | | | | /----- XP_013591036.1 [Brassica oleracea] (38) | | | | | | | | | | | |----- XP_009104757.1 [Brassica rapa] (40) | | | | | | | | | | /-52-+ /--99-+----- GSBRNA2T00143623001 [Brassica napus] (53) | | | | | | | | | | | | | | | |----- GSBRNA2T00143624001 [Brassica napus] (169) | | | | | | | | | | | | | |----78----+ \----- GSBRNA2T00099439001 [Brassica napus] (215) | | | | | | | | | | | | | |----------- RrC1130_p1 [Raphanus raphanistrum] (131) | | | | | | | | | | | | | \----------- Rsa1.0_01829.1_g00004.1 [Raphanus sativus] (137) | | | | | | | | | | | |---------------------- 676751682 [Sisymbrium irio] (51) | | | | /--84-+ | | | | | | | |---------------------- Tp5g29680 [Thellungiella parvula] (70) | | | | | | | | | | | | | |---------------------- Thhalv10019683m [Eutrema salsugineum] (182) | | | | | | | | | | | | | \---------------------- KFK41891.1 [Arabis alpina] (191) | | | | | | | | | | | | /----- GSBRNA2T00103558001 [Brassica napus] (77) | | | | | | | | | | \----73----+ | |----- XP_009106117.1 [Brassica rapa] (83) | | | | | | | | | | \----------86---------+----- RrC961_p8 [Raphanus raphanistrum] (154) | | | | | | | | | |----- XP_013590973.1 [Brassica oleracea] (157) | | | | | | | | | \----- GSBRNA2T00102740001 [Brassica napus] (177) | | | | | | | \--------------------------------- XP_010539967.1 [Tarenaya hassleriana] (49) | | | | | | /----------- Cotton_A_06141_BGI-A2_v1.0 [Gossypium arboreum] (11) | | | | | | | | /----- Gorai.008G181800.1 [Gossypium raimondii] (120) | | |-----------------100-----------------+-100-+ | | | | \----- Gh_D12G1645 [Gossypium hirsutum] (220) | | | | | | | \----------- Gh_A12G1523 [Gossypium hirsutum] (188) | | | | | | /----- EcC038428.10 [Eucalyptus camaldulensis] (25) | | |--------------------100--------------------+ | | | \----- Eucgr.K02464.1.p [Eucalyptus grandis] (57) | | | | | | /----- Gh_D05G2928 [Gossypium hirsutum] (31) | | | /--95-+ | | | | \----- Gorai.009G324000.1 [Gossypium raimondii] (41) | | | | | | |-----------------100-----------------+----------- Gh_A05G2637 [Gossypium hirsutum] (78) | | | | | | | \----------- Cotton_A_30335_BGI-A2_v1.0 [Gossypium arboreum] (216) | | | | | |------------------------------------------------- Eucgr.B03420.1.p [Eucalyptus grandis] (52) | /-56-+ | | | | | /----------- Gh_D03G0859 [Gossypium hirsutum] (71) | | | | | | | | | | /----- Gh_A03G0577 [Gossypium hirsutum] (114) | | | | /-100+-100-+ | | | | | | \----- Cotton_A_24786_BGI-A2_v1.0 [Gossypium arboreum] (225) | | | | | | | | | | | \----------- Gorai.003G095400.1 [Gossypium raimondii] (121) | | | | /--55-+ | | | | | | /----- Cotton_A_09215_BGI-A2_v1.0 [Gossypium arboreum] (115) | | | | | | | | | | | | | |----- Gh_A11G3000 [Gossypium hirsutum] (153) | | | | | \----96----+ | | | |------------52------------+ |----- Gh_D11G0327 [Gossypium hirsutum] (212) | | | | | | | | | | | \----- Gorai.007G036200.1 [Gossypium raimondii] (218) | | | | | | | | | \---------------------- Thecc1EG013900t1 [Theobroma cacao] (130) | | | | | | | | /----- Ciclev10033182m [Citrus clementina] (93) | | | | /-100-+ | | | | | \----- orange1.1g041198m [Citrus sinensis] (221) | | | |------------------74-----------------+ | | | | | /----- Neem_23646_f_1 [Azadirachta indica] (112) | | | | \-100-+ | | | | \----- Neem_360_f_3 [Azadirachta indica] (230) | | | | | | | |------------------------------------------------- Thecc1EG011736t1 [Theobroma cacao] (136) | | | | | | | |------------------------------------------------- evm.model.supercontig_388.7 [Carica papaya] (151) | | | | | | | \------------------------------------------------- Eucgr.G02519.1.p [Eucalyptus grandis] (186) | | | | | | /---------------- Bostr.10058s0009.1.p [Boechera stricta] (9) | | | | | | | | /----------- AA9G00050 [Aethionema arabicum] (13) | | | | | | | | | | /----- Csa10g046620.1 [Camelina sativa] (72) | | | | | | | | | | |-100-+----- Csa12g081510.1 [Camelina sativa] (152) | | | |-80-+ | | | | | | \----- Csa11g055920.1 [Camelina sativa] (219) | | | | | | | | | | /----- Carubv10006122m [Capsella rubella] (73) | | | | \-100-+ | | | | \----- Cagra.5905s0007.1.p [Capsella grandiflora] (130) | | | | | | | | /----- GSBRNA2T00045599001 [Brassica napus] (33) | | | | | | | | | |----- XP_009125118.1 [Brassica rapa] (65) | | | | /--94-+ | | | /-------88-------+ | |----- GSBRNA2T00098541001 [Brassica napus] (149) | | | | | | | | | | | |-79-+ \----- XP_013590340.1 [Brassica oleracea] (183) | | | | | | | | | | | | /----- RrC1278_p2 [Raphanus raphanistrum] (190) | | | | | \-100-+ | | | | | \----- Rsa1.0_00824.1_g00003.1 [Raphanus sativus] (192) | | | | | | | | | | /----- 676729892 [Sisymbrium irio] (46) | | | | |----59----+ | | | | | \----- KFK33185.1 [Arabis alpina] (270) | | | | | | | | | |---------------- AT5G39860.1 [Arabidopsis thaliana] (54) | | | | | | | | | |---------------- Tp7g02200 [Thellungiella parvula] (97) | | | | | | | | | |---------------- 916307 [Arabidopsis lyrata] (132) | | | | | | | | | \---------------- Thhalv10028074m [Eutrema salsugineum] (210) | | | | | | | | /----- GSBRNA2T00039316001 [Brassica napus] (12) | | | | /-100-+ | | | | | \----- XP_013596293.1 [Brassica oleracea] (179) | | | | | | | | | | /----- GSBRNA2T00144548001 [Brassica napus] (14) | | | | /------100------+-100-+ | | | | | | \----- XP_009151837.1 [Brassica rapa] (170) | | | | | | | | | | | | /----- Rsa1.0_00387.1_g00022.1 [Raphanus sativus] (62) | | | | | \-100-+ | | | | | \----- RrC11065_p1 [Raphanus raphanistrum] (148) | | | | | | | | | | /----- GSBRNA2T00109611001 [Brassica napus] (18) | | | | | /--96-+ | | | | | | \----- XP_013609367.1 [Brassica oleracea] (156) | | | | | | | | | | | | /----- Rsa1.0_03577.1_g00003.1 [Raphanus sativus] (96) | | | | | |--93-+ | | | |--65-+ /-71-+ \----- RrC8900_p1 [Raphanus raphanistrum] (224) | | | | | | | | | | | | | |----------- GSBRNA2T00009845001 [Brassica napus] (139) | | | | | /--57-+ | | | | | | | | \----------- XP_009111609.1 [Brassica rapa] (185) | | | /-86-+ | | | | | | | | | | \---------------- 676759562 [Sisymbrium irio] (50) | | | | | | | | | | | | | | /----------- GSBRNA2T00094284001 [Brassica napus] (19) | | | | | | | | | | | | | | | | /----- XP_013619191.1 [Brassica oleracea] (66) | | | | | | | /-78-+--98-+ | | | | | | | | | \----- GSBRNA2T00117629001 [Brassica napus] (91) | | | | | \-56-+ | | | | | | | |--92-+ \----------- XP_009129354.1 [Brassica rapa] (118) | | | | | | | | | | | | | | /----- RrC9029_p1 [Raphanus raphanistrum] (125) | | | | | | \----100---+ | | | | | | \----- Rsa1.0_00528.1_g00011.1 [Raphanus sativus] (138) | | | | | | | | | | | |---------------------- Tp2g17480 [Thellungiella parvula] (29) | | | | | | \-100-+ | | | \---------------------- Thhalv10005197m [Eutrema salsugineum] (87) | | | | | | | | /----------- Csa06g010130.1 [Camelina sativa] (20) | | | | | | | | |----------88---------+ /----- Csa09g021180.1 [Camelina sativa] (141) | | | | \--99-+ | | | | \----- Csa04g018080.1 [Camelina sativa] (178) | | | | | | | | /----- AT3G28857.1 [Arabidopsis thaliana] (28) | | | |------------100------------+ | | | | \----- Araha.23100s0004.1.p [Arabidopsis halleri] (240) | | | | | | | | /----- XP_010531809.1 [Tarenaya hassleriana] (75) | | | |-------------87------------+ | | | | \----- XP_010528329.1 [Tarenaya hassleriana] (199) | | | | | | | | /----- Carubv10018314m [Capsella rubella] (98) | | | |------------100------------+ | | | | \----- Cagra.3344s0001.1.p [Capsella grandiflora] (159) | | | | | | | |--------------------------------- Bostr.0556s0535.1.p [Boechera stricta] (99) | | | | | | | |--------------------------------- KFK33759.1 [Arabis alpina] (120) | | | | | | | |--------------------------------- 905167 [Arabidopsis lyrata] (142) | | | | | | | \--------------------------------- AA53G01073 [Aethionema arabicum] (189) | | | | | | /----- XP_013627243.1 [Brassica oleracea] (10) | | | | | | /--66-+ |----- GSBRNA2T00140441001 [Brassica napus] (190) | | | | /--91-+ | | | | | |----- XP_009131445.1 [Brassica rapa] (160) | | | | | | | | | | /----95----+ \----- GSBRNA2T00130029001 [Brassica napus] (195) | | | | | | | | | | | | /----- RrC8431_p1 [Raphanus raphanistrum] (122) | | | | | \--94-+ | | | | | \----- Rsa1.0_02379.1_g00003.1 [Raphanus sativus] (161) | | | | | | | | | | /----- AT5G15160.1 [Arabidopsis thaliana] (23) | | | | /-78-+ | | | | | | | /----91----+----- 909486 [Arabidopsis lyrata] (61) | | | | | | | | | | | | | | | \----- Araha.0323s0004.1.p [Arabidopsis halleri] (116) | | | | | | | | | | | | | | /----- Cagra.1036s0041.1.p [Capsella grandiflora] (64) | | | | | \--97-+ | | | | | | | |----- Csa08g007240.1 [Camelina sativa] (81) | | | | | | /--95-+ | | | | | | | |----- Carubv10002337m [Capsella rubella] (176) | | | | | | | | | | | | | \-98-+ \----- Csa20g021640.1 [Camelina sativa] (187) | | | | | | | | | | | \----------- Bostr.2902s0250.1.p [Boechera stricta] (160) | | | | | | | | | | /----- GSBRNA2T00081492001 [Brassica napus] (15) | | | | | | | | | | | |----- GSBRNA2T00143280001 [Brassica napus] (24) | | | | | | | | | | | /--72-+----- XP_013618836.1 [Brassica oleracea] (43) | |----76----+ | | | | | | | | | | |----- GSBRNA2T00151768001 [Brassica napus] (82) | | | | | | | | | | | /-100-+ | \----- XP_009126035.1 [Brassica rapa] (213) | | | | | | | | | | | | |-------59------+----------- GSBRNA2T00135547001 [Brassica napus] (55) | | | | | | | | | | | | | | /----- XP_013614399.1 [Brassica oleracea] (90) | | | | | | |--90-+ | | | | | | | \----- GSBRNA2T00142499001 [Brassica napus] (163) | | | | | | | | | | | | | \----------- XP_009121603.1 [Brassica rapa] (211) | | | | | | | | | | | |--------------------------- Thhalv10015131m [Eutrema salsugineum] (80) | | | | | | | | | \-55-+ |--------------------------- AA40G00572 [Aethionema arabicum] (88) | | | | | | | | | |--------------------------- RrC1631_p3 [Raphanus raphanistrum] (110) | | | | | | | | | |--------------------------- Rsa1.0_00301.1_g00039.1 [Raphanus sativus] (140) | | | | | | | | | |--------------------------- Tp6g28910 [Thellungiella parvula] (124) | | | | | | | | | |--------------------------- KFK25753.1 [Arabis alpina] (198) | | | | | | | | | \--------------------------- 676789426 [Sisymbrium irio] (220) | | | | | | | \--------------------------------- Eucgr.I01936.1.p [Eucalyptus grandis] (150) | | | | | | /----- XP_010550064.1 [Tarenaya hassleriana] (35) | | \------------------50------------------+ | | \----- XP_010551862.1 [Tarenaya hassleriana] (58) | | | |------------------------------------------------------- Gh_A09G0192 [Gossypium hirsutum] (32) | | | |------------------------------------------------------- Gh_D09G0182 [Gossypium hirsutum] (45) | | | |------------------------------------------------------- Thecc1EG018476t1 [Theobroma cacao] (48) | | | | /----- Neem_7476_f_8 [Azadirachta indica] (67) | | /--84-+ | | | \----- Neem_21152_f_3 [Azadirachta indica] (170) | |--------------------100--------------------+ | | \----------- Ciclev10013209m [Citrus clementina] (172) | | | |------------------------------------------------------- Gorai.006G021800.1 [Gossypium raimondii] (86) | | | \------------------------------------------------------- Cotton_A_27088_BGI-A2_v1.0 [Gossypium arboreum] (123) | \------------------------------------------------------------ evm.model.supercontig_14.15 [Carica papaya] (110) |