![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2461
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 119: /----- Tp1g16960 [Thellungiella parvula] (4) /---------76---------+ | \----- Thhalv10008346m [Eutrema salsugineum] (37) | | /----- Rsa1.0_00145.1_g00031.1 [Raphanus sativus] (9) | /---100---+ | | \----- RrC2020_p4 [Raphanus raphanistrum] (15) | | | /--94-+ /----- GSBRNA2T00102900001 [Brassica napus] (11) /---100---+ | | /-100+ | | | | | \----- XP_009110306.1 [Brassica rapa] (34) | | | \-100+ | | | | /----- GSBRNA2T00139546001 [Brassica napus] (59) | | | \-100+ | | | \----- XP_013605423.1 [Brassica oleracea] (68) | | | | \-90-+--------------------- 676725958 [Sisymbrium irio] (17) | | | | /----- XP_013599652.1 [Brassica oleracea] (20) | | /-100+ | | | \----- GSBRNA2T00136868001 [Brassica napus] (43) | | /-100+ | | | | /----- GSBRNA2T00016178001 [Brassica napus] (27) | | | \-100+ | \-100-+ \----- XP_009117571.1 [Brassica rapa] (29) | | | | /----- RrC4516_p1 [Raphanus raphanistrum] (32) /-100+ \---100---+ | | \----- Rsa1.0_01853.1_g00008.1 [Raphanus sativus] (54) | | | | /----- Cagra.1961s0096.1.p [Capsella grandiflora] (12) | | /---100---+ | | | \----- Carubv10011841m [Capsella rubella] (55) | | | | | /-100-+ /---------- Csa17g024820.1 [Camelina sativa] (33) | | | | | | | | \-100+ /----- Csa03g022860.1 [Camelina sativa] (47) | | /-100+ \-100+ | | | | \----- Csa14g024360.1 [Camelina sativa] (65) /-100+ | | | | | | | \--------------------- Bostr.7128s0505.1.p [Boechera stricta] (28) | | | /-100+ | | | | | /---------- AT1G19000.1 [Arabidopsis thaliana] (56) | | | | | | | | | | \------100------+ /----- Araha.2977s0002.1.p [Arabidopsis halleri] (63) | | \-87-+ \-87-+ | | | \----- 472123 [Arabidopsis lyrata] (69) /--99-+ | | | | | \------------------------------- KFK44045.1 [Arabis alpina] (44) | | | | | \----------------------------------------- AA39G00188 [Aethionema arabicum] (16) | | | | /---------- XP_010533435.1 [Tarenaya hassleriana] (7) | | | | \----------------100----------------+ /----- XP_010539946.1 [Tarenaya hassleriana] (19) | \-65-+ | \----- XP_010532298.1 [Tarenaya hassleriana] (21) | | /--------------------- evm.model.supercontig_35.12 [Carica papaya] (6) /-100+ | | | | /----- Ciclev10021454m [Citrus clementina] (40) | | | /-100+ | | /-100+ | \----- orange1.1g022562m [Citrus sinensis] (62) | | | | /-100+ | | | | | \---------- Ciclev10030461m [Citrus clementina] (60) | | | \--96-+ | | | | /----- Eucgr.B00377.1.p [Eucalyptus grandis] (45) | | | \---100---+ | | | \----- Eucgr.K02897.1.p [Eucalyptus grandis] (67) | | | | | | /----- Gh_D03G0836 [Gossypium hirsutum] (8) | \-----------100-----------+ /-54-+ | | | \----- Gh_A03G0673 [Gossypium hirsutum] (36) /-100+ | /-100+ | | | | \---------- Gorai.003G071500.1 [Gossypium raimondii] (42) | | | /--76-+ | | | | \--------------- Thecc1EG013524t1 [Theobroma cacao] (64) | | | | | | | | /---------- Gh_A11G2982 [Gossypium hirsutum] (39) | | \-100+ | | | | /-100+ /----- Gh_D11G3534 [Gossypium hirsutum] (51) --76-+ | | | \-100+ | | \-100-+ \----- Gorai.007G034000.1 [Gossypium raimondii] (57) | | | | | \--------------- Cotton_A_09189_BGI-A2_v1.0 [Gossypium arboreum] (50) | | | \--------------------------------------------------------- AA31G00468 [Aethionema arabicum] (35) | \-------------------------------------------------------------- KFK41920.1 [Arabis alpina] (38) Root part of tree: /------------------------------------------------------------------- Tp5g29970 [Thellungiella parvula] (1) | | /-------- Csa16g038730.1 [Camelina sativa] (2) | /---68---+ | | \-------- Csa09g079410.1 [Camelina sativa] (58) | /--100--+ | | \----------------- Csa07g046270.1 [Camelina sativa] (5) | /---99--+ | | | /-------- Cagra.0402s0045.1.p [Capsella grandiflora] (13) | | \-------100------+ | /---100--+ \-------- Carubv10020668m [Capsella rubella] (66) | | | | | \--------------------------------- Bostr.3288s0130.1.p [Boechera stricta] (26) | /--100--+ | | | /----------------- AT1G74840.1 [Arabidopsis thaliana] (31) | | | | | | \-----------100----------+ /-------- 476620 [Arabidopsis lyrata] (41) | /---99---+ \---95---+ | | | \-------- Araha.9281s0002.1.p [Arabidopsis halleri] (52) + | | |--100--+ \-------------------------------------------------- (119) | | | \----------------------------------------------------------- Thhalv10018822m [Eutrema salsugineum] (25) | | /-------- GSBRNA2T00081907001 [Brassica napus] (3) | /---99---+ | | \-------- XP_009106138.1 [Brassica rapa] (18) | | | /--100--+----------------- XP_013589742.1 [Brassica oleracea] (23) | | | | | \----------------- GSBRNA2T00034303001 [Brassica napus] (48) | | | /---98--+ /-------- RrC5419_p2 [Raphanus raphanistrum] (24) | | | /---100--+ | | | | \-------- Rsa1.0_02605.1_g00009.1 [Raphanus sativus] (49) | | \---81--+ | | \----------------- 676737300 [Sisymbrium irio] (61) | | \----------------56---------------+ /----------------- XP_013619062.1 [Brassica oleracea] (10) | | | /--100--+ /-------- XP_009128066.1 [Brassica rapa] (30) | | \---100--+ | | \-------- GSBRNA2T00083143001 [Brassica napus] (46) \--100--+ | /----------------- Rsa1.0_42167.1_g00001.1 [Raphanus sativus] (14) | | \--100--+ /-------- RrC1823_p3 [Raphanus raphanistrum] (22) \---65---+ \-------- Rsa1.0_06306.1_g00002.1 [Raphanus sativus] (53) |