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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2408
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 128: /----- XP_010535245.1 [Tarenaya hassleriana] (2) /-------------------100------------------+ | \----- XP_010519240.1 [Tarenaya hassleriana] (67) | | /---------- Cotton_A_23161_BGI-A2_v1.0 [Gossypium arboreum] (6) | | | | /----- Gorai.013G172800.1 [Gossypium raimondii] (36) | /------100------+-100+ | | | \----- Gh_D13G1576 [Gossypium hirsutum] (46) | | | | | \---------- Gh_A13G1272 [Gossypium hirsutum] (48) | | | | /----- Gorai.009G373000.1 [Gossypium raimondii] (8) | | /-57-+ | /-100+ | \----- Gh_D05G3332 [Gossypium hirsutum] (40) | | | /----100---+ | | | | | /----- Gh_A04G0316 [Gossypium hirsutum] (45) | | | | \-100+ | | | | \----- Cotton_A_22289_BGI-A2_v1.0 [Gossypium arboreum] (50) | | | | | | | | /----- Gh_D01G0419 [Gossypium hirsutum] (17) | | \-100+ /-99-+ /--95-+ /-100+ | | \----- Gorai.002G064500.1 [Gossypium raimondii] (20) | | | | | /-100+ | | | | | | | /----- Cotton_A_20110_BGI-A2_v1.0 [Gossypium arboreum] (18) | | | | | | \-98-+ | | | | \--99-+ \----- Gh_A01G0414 [Gossypium hirsutum] (23) | | | | | | | | | \--------------- Thecc1EG031706t1 [Theobroma cacao] (27) | | | | | | | \------------------------------- evm.model.supercontig_131.71 [Carica papaya] (12) | | | | | | /---------- Neem_14419_f_1 [Azadirachta indica] (7) | | /-100+ | | | | | /-100+ /----- orange1.1g019898m [Citrus sinensis] (19) | | | | | \-100+ | | | | /-100-+ \----- Ciclev10015871m [Citrus clementina] (37) | | | | | | | | | | | \--------------- Thecc1EG003652t1 [Theobroma cacao] (49) | | | | /-100+ | | | | | | /----- Eucgr.K01089.1.p [Eucalyptus grandis] (26) | | | | | \------100------+ | \-100+ | | \----- EcC048867.50 [Eucalyptus camaldulensis] (63) | | \----95---+ | | | /----- orange1.1g014360m [Citrus sinensis] (30) | | | /-100+ | | | | \----- Ciclev10008390m [Citrus clementina] (47) | | \------100------+ | | \---------- Neem_2528_f_4 [Azadirachta indica] (70) | | | \----------------------------------------- Eucgr.F01204.1.p [Eucalyptus grandis] (57) | | /----- Cagra.0007s0045.1.p [Capsella grandiflora] (3) | /-------97------+ | | \----- Carubv10013851m [Capsella rubella] (24) | | | | /----- AT3G15030.1 [Arabidopsis thaliana] (4) | | /-82-+ | | | \----- 897773 [Arabidopsis lyrata] (51) | | /-74-+ | /-64-+ | \---------- Csa15g019440.1 [Camelina sativa] (66) | | | | /-99-+ | |--57-+--------------- Csa19g021690.1 [Camelina sativa] (29) | | | | | | | /-91-+ | \--------------- Csa01g017540.1 [Camelina sativa] (32) | | | | | | | | | \--------------------- Csa32263s010.1 [Camelina sativa] (61) | | | | | | | \-------------------------- Bostr.28625s0206.1.p [Boechera stricta] (68) | | | | | | /--------------- Rsa1.0_23478.1_g00001.1 [Raphanus sativus] (10) | | | | | | | | /----- XP_013630036.1 [Brassica oleracea] (21) | | | /-100-+ /-97-+ | | | | | | \----- GSBRNA2T00123757001 [Brassica napus] (42) | | | | \-89-+ | | /-51-+ | | /----- XP_009135417.1 [Brassica rapa] (52) | | | | | \-100+ | | | | | \----- GSBRNA2T00137591001 [Brassica napus] (59) | | | | /-96-+ | | | | | | /----- Rsa1.0_00466.1_g00013.1 [Raphanus sativus] (15) | | | | | | /---100---+ | | | | | | | \----- RrC17193_p1 [Raphanus raphanistrum] (64) | | | | | | | | | | | | \-100-+ /---------- XP_013616186.1 [Brassica oleracea] (31) /-100+ | | | | | | | | | | | | \-100+ /----- GSBRNA2T00009950001 [Brassica napus] (39) | | | | | | \-100+ | | | | \-99-+ \----- XP_009116532.1 [Brassica rapa] (41) | | | /-51-+ | | | | | | | /----- XP_013587208.1 [Brassica oleracea] (16) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00075987001 [Brassica napus] (69) | | | | | | /-86-+ | | | | | | | | /----- RrC2608_p5 [Raphanus raphanistrum] (33) | | | | | | | \-99-+ | | | | | \----99----+ \----- Rsa1.0_00377.1_g00011.1 [Raphanus sativus] (58) | | | /-92-+ | | | | | | | | \--------------- XP_009146296.1 [Brassica rapa] (22) | | | | | | | | | | | |------------------------------------ 676784608 [Sisymbrium irio] (34) | | | | | | | | \--92-+ | \------------------------------------ Tp3g13230 [Thellungiella parvula] (60) | | | | --100+ | | \----------------------------------------- Thhalv10020786m [Eutrema salsugineum] (13) | | | | | \---------------------------------------------- AA26G00213 [Aethionema arabicum] (25) | | | \--------------------------------------------------------- AA15G00099 [Aethionema arabicum] (43) | | /----- Rsa1.0_02089.1_g00003.1 [Raphanus sativus] (5) | /-100+ | | \----- RrC11789_p1 [Raphanus raphanistrum] (35) | /-100+ | | | /----- XP_009106990.1 [Brassica rapa] (14) | | \-100+ | /--98-+ \----- GSBRNA2T00114181001 [Brassica napus] (38) | | | | /-96-+ \--------------- 676740086 [Sisymbrium irio] (44) | | | | /-100+ \--------------------- Tp1g39800 [Thellungiella parvula] (9) | | | \--------------97--------------+ \-------------------------- Thhalv10011534m [Eutrema salsugineum] (71) | \------------------------------- KFK35712.1 [Arabis alpina] (62) Root part of tree: /------------------------------------------------------------------- Bostr.0124s0115.1.p [Boechera stricta] (1) | | /--------------------------------- (128) | | |---------------100---------------+ /----------------- 474447 [Arabidopsis lyrata] (28) | \------100------+ | \----------------- AT1G53230.1 [Arabidopsis thaliana] (53) + | /----------------- Csa17g093530.1 [Camelina sativa] (11) | /-------91------+ | | \----------------- Csa14g063740.1 [Camelina sativa] (65) | /-------100------+ | | \--------------------------------- Csa03g060450.1 [Camelina sativa] (54) \-------80-------+ | /----------------- Cagra.1472s0007.1.p [Capsella grandiflora] (55) \---------------100--------------+ \----------------- Carubv10009348m [Capsella rubella] (56) |