![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2380
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 124: /----- 878662 [Arabidopsis lyrata] (6) /-100+ | \----- Araha.5092s0013.1.p [Arabidopsis halleri] (25) /------100------+ | \---------- AT1G04990.1 [Arabidopsis thaliana] (38) | | /---------- Csa14g006230.1 [Camelina sativa] (33) | | | /-100+ /----- Csa03g006320.1 [Camelina sativa] (42) /-100+ | \-53-+ | | | \----- Csa17g008250.1 [Camelina sativa] (50) | | /-100-+ | | | | /----- Cagra.1671s0119.1.p [Capsella grandiflora] (52) | | | \---100---+ /-98-+ \-100+ \----- Carubv10009335m [Capsella rubella] (63) | | | | | \--------------------- Bostr.25219s0472.1.p [Boechera stricta] (49) | | | \------------------------------- KFK42845.1 [Arabis alpina] (62) | | /----- XP_013586676.1 [Brassica oleracea] (15) | /-100+ | | \----- GSBRNA2T00002814001 [Brassica napus] (74) | /-100+ /-100+ | | /----- GSBRNA2T00010620001 [Brassica napus] (17) | | | \-100+ | | /-100-+ \----- XP_009119217.1 [Brassica rapa] (30) | | | | | | | | /----- Rsa1.0_04384.1_g00003.1 [Raphanus sativus] (23) | | /-100+ \---100---+ | | | | \----- RrC6694_p4 [Raphanus raphanistrum] (71) /------100------+ | | | | | | /-100+ \--------------------- 676725582 [Sisymbrium irio] (64) | | | | | | | \-100+ \-------------------------- Tp1g03870 [Thellungiella parvula] (51) | | | | | \------------------------------- Thhalv10007912m [Eutrema salsugineum] (31) | | | \----------------------------------------- AA19G00049 [Aethionema arabicum] (43) | | /----- Neem_39691_f_1 [Azadirachta indica] (12) | /-100+ | | \----- Neem_4792_f_1 [Azadirachta indica] (54) | /-----------100-----------+ | | | /----- orange1.1g013033m [Citrus sinensis] (34) | | \-100+ | | \----- Ciclev10015215m [Citrus clementina] (39) | | | | /----- Cotton_A_30489_BGI-A2_v1.0 [Gossypium arboreum] (22) | | /-100+ | | | \----- Gh_A07G0778 [Gossypium hirsutum] (44) | | /----100---+ | | | | /----- Gh_D07G0845 [Gossypium hirsutum] (46) | | | \-100+ /-100+ | | \----- Gorai.001G097100.1 [Gossypium raimondii] (58) | | /-92-+ | | | | | /-100+ /----- Gh_D07G0843 [Gossypium hirsutum] (27) | | | | | | /-100+ | | | | | | | \----- Gorai.001G096900.1 [Gossypium raimondii] (72) | | | | | | /-100+ | | | | | | | \---------- Gh_A07G0777 [Gossypium hirsutum] (55) | | | | | \-100-+ | | | | /-100+ \--------------- Cotton_A_30487_BGI-A2_v1.0 [Gossypium arboreum] (28) | | | | | | | | | | | | /----- Gh_A07G1537 [Gossypium hirsutum] (24) | | /-92-+ | | | /-90-+ | | | | | | | | \----- Cotton_A_27029_BGI-A2_v1.0 [Gossypium arboreum] (67) | | | | \-100+ \------100------+ | | | | | | /----- Gh_D07G1698 [Gossypium hirsutum] (69) --100+ | | | | \-100+ | | | | | \----- Gorai.001G195600.1 [Gossypium raimondii] (70) | | /-100-+ | | | | | | | \------------------------------- Thecc1EG002195t1 [Theobroma cacao] (26) | | | | | | | | | \----------------------------------------- evm.model.supercontig_346.1 [Carica papaya] (37) | | | | | \-100+ \---------------------------------------------- XP_010532994.1 [Tarenaya hassleriana] (59) | | | | /----- XP_010522373.1 [Tarenaya hassleriana] (16) | | /-100+ | | | \----- XP_010556971.1 [Tarenaya hassleriana] (32) | \-------------------100-------------------+ | \---------- XP_010542997.1 [Tarenaya hassleriana] (35) | \-------------------------------------------------------------- AA32G00506 [Aethionema arabicum] (21) Subtree rooted at node 144: /----- Cagra.0301s0088.1.p [Capsella grandiflora] (2) /---100---+ | \----- Carubv10023174m [Capsella rubella] (61) | /-100-+ /---------- Csa05g023660.1 [Camelina sativa] (9) | | | | \-100+ /----- Csa16g008420.1 [Camelina sativa] (10) /-100+ \-100+ | | \----- Csa07g008630.1 [Camelina sativa] (29) | | | \--------------------- Bostr.23794s0805.1.p [Boechera stricta] (3) /-100+ | | /---------- AT2G32930.2 [Arabidopsis thaliana] (14) | | | | \-------99------+ /----- 345050 [Arabidopsis lyrata] (48) /-93-+ \-100+ | | \----- Araha.12821s0004.1.p [Arabidopsis halleri] (65) | | /-100+ \------------------------------- (124) | | /-99-+ \------------------------------------ KFK31098.1 [Arabis alpina] (45) | | /--74-+ \----------------------------------------- Thhalv10016979m [Eutrema salsugineum] (7) | | | \---------------------------------------------- Tp4g15290 [Thellungiella parvula] (60) | /-90-+ /--------------------- 676783642 [Sisymbrium irio] (8) | | | | | | /----- RrC82_p1 [Raphanus raphanistrum] (13) | \--------------100-------------+ /---100---+ | | | \----- Rsa1.0_05995.1_g00001.1 [Raphanus sativus] (66) | | | | \-100-+ /----- XP_009143918.1 [Brassica rapa] (56) | | /-100+ | | | \----- GSBRNA2T00007244001 [Brassica napus] (75) | \-100+ /-100+ | /----- XP_013631061.1 [Brassica oleracea] (57) | | \-100+ | | \----- GSBRNA2T00061146001 [Brassica napus] (68) | | | | /---------- RrC253_p2 [Raphanus raphanistrum] (5) | | | | | /-100+ /----- Rsa1.0_08643.1_g00001.1 [Raphanus sativus] (40) | | | \-76-+ | | | \----- Rsa1.0_03401.1_g00005.1 [Raphanus sativus] (53) | | | --100+ \-------------------100-------------------+ /----- GSBRNA2T00132243001 [Brassica napus] (11) | | /-100+ | | | \----- XP_013625934.1 [Brassica oleracea] (20) | \-100+ | | /----- XP_009132897.1 [Brassica rapa] (41) | \-100+ | \----- GSBRNA2T00141993001 [Brassica napus] (73) | | /----- RrC16853_p1 [Raphanus raphanistrum] (18) \---------------------------100--------------------------+ \----- Rsa1.0_00616.1_g00003.1 [Raphanus sativus] (19) Root part of tree: /------------------------------------------------------------------- XP_013634191.1 [Brassica oleracea] (1) | |------------------------------------------------------------------- GSBRNA2T00024141001 [Brassica napus] (36) + | /--------------------------------------------- (144) | | \---------100---------+ /---------------------- XP_009141281.1 [Brassica rapa] (4) \----------100---------+ \---------------------- GSBRNA2T00006460001 [Brassica napus] (47) |