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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2028
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 114: /----- Cagra.7309s0002.1.p [Capsella grandiflora] (6) /---100---+ | \----- Carubv10018774m [Capsella rubella] (15) | /------100------+ /----- 905786 [Arabidopsis lyrata] (51) | | /-100+ | | | \----- Araha.3367s0002.1.p [Arabidopsis halleri] (53) | \-100+ | \---------- AT3G46070.1 [Arabidopsis thaliana] (67) | | /----- Csa06g019820.1 [Camelina sativa] (20) | /-99-+ | | \----- Csa04g028800.1 [Camelina sativa] (54) | /-100+ | | \---------- Csa09g041170.1 [Camelina sativa] (30) /------97------+ /-100-+ | | | | /----- Carubv10018142m [Capsella rubella] (66) | | | \---100---+ | | | \----- Cagra.7309s0001.1.p [Capsella grandiflora] (72) | | | | | | /---------- AT3G46090.1 [Arabidopsis thaliana] (50) | | /-95-+ | | | | |----50----+ /----- AT3G46080.1 [Arabidopsis thaliana] (55) | | | | \-55-+ | | | | \----- 484989 [Arabidopsis lyrata] (59) | \-100+ | | | \--------------------- Araha.3367s0001.1.p [Arabidopsis halleri] (60) | | | \-------------------------- Bostr.18473s0333.1.p [Boechera stricta] (24) | | /----- 676725526 [Sisymbrium irio] (8) | /---------91---------+ | | \----- 676725528 [Sisymbrium irio] (58) | | | | /----- XP_013627620.1 [Brassica oleracea] (14) | | /-100+ | | | \----- GSBRNA2T00143999001 [Brassica napus] (75) | | /-100+ | /-86-+ | | /----- GSBRNA2T00107287001 [Brassica napus] (38) | | | | \-100+ /--97-+ | | /-100-+ \----- XP_009149989.1 [Brassica rapa] (52) | | | | | | | | | | | | /----- RrC8129_p2 [Raphanus raphanistrum] (22) | | | | | \---100---+ | | | | | \----- Rsa1.0_01743.1_g00006.1 [Raphanus sativus] (64) | | | \-99-+ | | /-100+ | /----- XP_009150252.1 [Brassica rapa] (16) | | | | | /-100+ | | | | | | \----- GSBRNA2T00046472001 [Brassica napus] (56) | | | | \----100---+ | | | | | /----- RrC2893_p3 [Raphanus raphanistrum] (23) | | | | \-100+ | | | | \----- Rsa1.0_00651.1_g00005.1 [Raphanus sativus] (33) | | | | | | | \------------------------------- Tp5g15540 [Thellungiella parvula] (62) | | | | | | /----- GSBRNA2T00046471001 [Brassica napus] (17) | | /-100+ /-100+ /-100+ | | | | \----- XP_009150251.1 [Brassica rapa] (49) | | | | |-----------100-----------+ | | | | | | /----- RrC2893_p2 [Raphanus raphanistrum] (36) | | | | | \-100+ | | | | | \----- Rsa1.0_00651.1_g00004.1 [Raphanus sativus] (45) | | | | | | | | | |------------------------------------ Tp5g15530 [Thellungiella parvula] (25) | | \-100+ | | | | | /---------- 676725512 [Sisymbrium irio] (29) | | | | | /-100+ | | \-----------100-----------+ /----- GSBRNA2T00125685001 [Brassica napus] (41) | | | | \-100+ | | | | \----- XP_013591437.1 [Brassica oleracea] (44) | | | | | | | | /----- Thhalv10002839m [Eutrema salsugineum] (12) | | | \-----------------87----------------+ | | | \----- Thhalv10002947m [Eutrema salsugineum] (18) | | | --100+ | \---------------------------------------------------- KFK33964.1 [Arabis alpina] (73) | | | \--------------------------------------------------------- AA16G00069 [Aethionema arabicum] (61) | | /----- XP_010541384.1 [Tarenaya hassleriana] (9) | /-88-+ | | \----- XP_010536246.1 [Tarenaya hassleriana] (70) \------------------------100------------------------+ \---------- XP_010520301.1 [Tarenaya hassleriana] (42) Root part of tree: /------------------------------------------------------------------- AT5G59820.1 [Arabidopsis thaliana] (1) | |------------------------------------------------------------------- 919218 [Arabidopsis lyrata] (7) | |------------------------------------------------------------------- Araha.2561s0008.1.p [Arabidopsis halleri] (31) | | /--------------- Csa18g033110.1 [Camelina sativa] (2) | | | | /------- (114) | /--99--+--100--+ | | | \------- AA97G00032 [Aethionema arabicum] (32) | | | | | \--------------- KFK27524.1 [Arabis alpina] (21) | | | |---------------------- Csa11g093680.1 [Camelina sativa] (3) | /------------------93-----------------+ | | | /------- Carubv10027055m [Capsella rubella] (19) | | |------100-----+ + | | \------- Cagra.1317s0034.1.p [Capsella grandiflora] (34) | | | | | \---------------------- Csa02g065560.1 [Camelina sativa] (46) | | | | /---------------------- XP_013619843.1 [Brassica oleracea] (4) | | | | | | /------- RrC2002_p4 [Raphanus raphanistrum] (10) | | | /---97--+ | | /---62--+ | \------- Rsa1.0_01835.1_g00001.1 [Raphanus sativus] (71) | | | |--63--+ | | | | \--------------- Rsa1.0_01835.1_g00003.1 [Raphanus sativus] (39) | | | | | | /--99--+ \---------------------- GSBRNA2T00048022001 [Brassica napus] (76) | | | | | | | | /------- GSBRNA2T00001506001 [Brassica napus] (13) | | /---99--+ \----------93----------+ | | | | \------- XP_009126657.1 [Brassica rapa] (57) \--57--+ | | | | \------------------------------------- Tp6g21500 [Thellungiella parvula] (5) | | | | /------- XP_009131970.1 [Brassica rapa] (11) | | | | | /--100--+------- XP_009131969.1 [Brassica rapa] (27) | | | | | | | \------- GSBRNA2T00148776001 [Brassica napus] (63) | | /--100-+ | /--100-+ | | /------- GSBRNA2T00141024001 [Brassica napus] (28) | | | | \---96--+ | | | /------97------+ \------- XP_013623570.1 [Brassica oleracea] (35) | | | | | | | | | | /------- RrC7886_p1 [Raphanus raphanistrum] (37) | | | | \------100-----+ | | | | \------- Rsa1.0_03605.1_g00003.1 [Raphanus sativus] (68) | | | | | | | | /------- Rsa1.0_03900.1_g00003.1 [Raphanus sativus] (26) | | | | /--100--+ | | \--100--+ | \------- RrC1916_p1 [Raphanus raphanistrum] (65) \---80--+ | /--94--+ | | | | /------- GSBRNA2T00047920001 [Brassica napus] (43) | | | \---97--+ | | /--100--+ \------- XP_009120502.1 [Brassica rapa] (74) | | | | | | | | /------- GSBRNA2T00133177001 [Brassica napus] (47) | \--100-+ \------100-----+ | | \------- XP_013609906.1 [Brassica oleracea] (69) | | | \------------------------------ Thhalv10014884m [Eutrema salsugineum] (48) | \---------------------------------------------------- Bostr.26833s0254.1.p [Boechera stricta] (40) |