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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1998
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 128: /----- XP_013597834.1 [Brassica oleracea] (2) /-100+ | \----- GSBRNA2T00145022001 [Brassica napus] (68) /-100+ | | /----- GSBRNA2T00047582001 [Brassica napus] (8) | \-100+ /-100-+ \----- XP_009121154.1 [Brassica rapa] (28) | | | | /----- RrC1100_p6 [Raphanus raphanistrum] (31) /-100+ \---100---+ | | \----- Rsa1.0_00352.1_g00008.1 [Raphanus sativus] (59) | | | \--------------------- 676777966 [Sisymbrium irio] (41) | | /----- GSBRNA2T00147403001 [Brassica napus] (21) /-100+ /-100+ | | | \----- XP_009150852.1 [Brassica rapa] (29) | | /-100+ | | | | /----- GSBRNA2T00125045001 [Brassica napus] (34) | | | \-100+ | | | \----- XP_013629275.1 [Brassica oleracea] (36) | \----100---+ /-100+ | /----- Rsa1.0_08072.1_g00002.1 [Raphanus sativus] (30) | | | | | | \---100---+----- RrC3152_p3 [Raphanus raphanistrum] (45) | | | /-100+ | \----- Rsa1.0_23065.1_g00001.1 [Raphanus sativus] (65) | | | | | \------------------------------- Tp3g30490 [Thellungiella parvula] (57) | | | \------------------------------------ Thhalv10022536m [Eutrema salsugineum] (58) | | /---------- AT2G17150.1 [Arabidopsis thaliana] (6) /-100+ | | | /----100---+ /----- Araha.7578s0001.1.p [Arabidopsis halleri] (9) | | | \-100+ | | | \----- 875028 [Arabidopsis lyrata] (43) | | | | | | /----- Csa01g032730.1 [Camelina sativa] (11) | \--------100--------+ /-100+ | | | \----- Csa19g053930.1 [Camelina sativa] (15) | | /-100+ /----100---+ | | \---------- Csa15g074220.1 [Camelina sativa] (25) | | | | | | \-100-+ /----- Carubv10012927m [Capsella rubella] (14) | | | /-100+ | | | | \----- Cagra.0805s0015.1.p [Capsella grandiflora] (73) | | \-87-+ | | \---------- Bostr.18351s0175.1.p [Boechera stricta] (70) | | | \---------------------------------------------- AA33G00033 [Aethionema arabicum] (39) | | /--------------- Rsa1.0_00094.1_g00020.1 [Raphanus sativus] (7) | | | | /----- GSBRNA2T00130911001 [Brassica napus] (20) | /-100-+ /-100+ | | | | \----- XP_013604758.1 [Brassica oleracea] (74) | | \-100+ | | | /----- XP_009103570.1 [Brassica rapa] (51) | | \-100+ | | \----- GSBRNA2T00121384001 [Brassica napus] (61) | | | /-100+ /----- XP_009138351.1 [Brassica rapa] (32) | | | /-100+ | | | | \----- GSBRNA2T00071498001 [Brassica napus] (71) | | | /-100+ | | | | | /----- GSBRNA2T00100063001 [Brassica napus] (35) | | | | \-100+ | /-100+ \-100-+ \----- XP_013599251.1 [Brassica oleracea] (37) /-100+ | | | | | | | | /----- Rsa1.0_00678.1_g00001.1 [Raphanus sativus] (38) | | | | \---100---+ | | | | \----- RrC165_p9 [Raphanus raphanistrum] (47) | | /-100+ | | | | | \-------------------------- 676721284 [Sisymbrium irio] (53) | | | | | | | | /----- Rsa1.0_02421.1_g00001.1 [Raphanus sativus] (60) | | /-88-+ \-----------100-----------+ | | | | \----- RrC392_p7 [Raphanus raphanistrum] (72) | | | | | | /-100+ \------------------------------------ Tp7g33050 [Thellungiella parvula] (40) | | | | | | | \----------------------------------------- Thhalv10024319m [Eutrema salsugineum] (76) | | | | | | /----- Carubv10004068m [Capsella rubella] (16) | | | /---100---+ | | | | \----- Cagra.2350s0071.1.p [Capsella grandiflora] (63) --100+ | | | | | /-100-+ /-100-+ /---------- Csa12g008230.1 [Camelina sativa] (22) | | | | | | | | | | | | \-100+ /----- Csa10g006860.1 [Camelina sativa] (26) | | | | /-99-+ \-100+ | | | | | | \----- Csa11g006520.1 [Camelina sativa] (33) | | | | | | | | | | | \--------------------- Bostr.7867s1388.1.p [Boechera stricta] (62) | \-100+ \--------100--------+ | | | /----- Araha.0473s0001.1.p [Arabidopsis halleri] (42) | | | /-100+ | | | | \----- 491122 [Arabidopsis lyrata] (54) | | \------100------+ | | \---------- AT4G35270.1 [Arabidopsis thaliana] (67) | | | \---------------------------------------------------- AA79G00017 [Aethionema arabicum] (75) | | /----- XP_010548150.1 [Tarenaya hassleriana] (17) \---------------------------100--------------------------+ \----- XP_010530951.1 [Tarenaya hassleriana] (66) Root part of tree: /------------------------------------------------------------------- Gh_A12G0297 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Cotton_A_02095_BGI-A2_v1.0 [Gossypium arboreum] (13) | | /------- (128) | /-------------100-------------+ | | \------- evm.model.supercontig_20.206 [Carica papaya] (64) | | | | /------- EcC048543.20 [Eucalyptus camaldulensis] (3) | | /------100-----+ | | | \------- Neem_23926_f_4 [Azadirachta indica] (10) | /--100--+ | | | | /--100--+ /------- Eucgr.G01859.1.p [Eucalyptus grandis] (5) | | | | | /--100--+ | | | | | | \------- EcS571845.10 [Eucalyptus camaldulensis] (49) | | | | \--100-+ | | | | \--------------- Eucgr.I01519.1.p [Eucalyptus grandis] (46) | | \--100-+ | | | /------- Ciclev10027765m [Citrus clementina] (4) + | | /--100--+ | | | | \------- orange1.1g004957m [Citrus sinensis] (44) | | \------100-----+ | | | /------- Neem_11279_f_2 [Azadirachta indica] (19) | /--100-+ \--100--+ | | | \------- Neem_21949_f_1 [Azadirachta indica] (52) | | | | | | /------- Cotton_A_00586_BGI-A2_v1.0 [Gossypium arboreum] (24) | | | /--100--+ | | | | \------- Gh_A03G1857 [Gossypium hirsutum] (69) | | |-------------100-------------+ | | | | /------- Gorai.005G259100.1 [Gossypium raimondii] (27) | /--100--+ | \--100--+ | | | | \------- Gh_D02G2296 [Gossypium hirsutum] (50) | | | | | | | \--------------------------------------------- Thecc1EG006453t1 [Theobroma cacao] (77) | | | | | | /------- Gh_A01G1468 [Gossypium hirsutum] (12) | | | /--100--+ \--100-+ | | \------- Cotton_A_33891_BGI-A2_v1.0 [Gossypium arboreum] (55) | \-----------------100----------------+ | | /------- Gorai.002G206700.1 [Gossypium raimondii] (18) | \--100--+ | \------- Gh_D01G1705 [Gossypium hirsutum] (23) | | /------- Gh_D12G0368 [Gossypium hirsutum] (48) \-------------------------100------------------------+ \------- Gorai.008G041100.1 [Gossypium raimondii] (56) |