PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM1998
Phylogenetic tree for protein ? help Back to Top
      Subtree rooted at node 128:

                                                                    /----- XP_013597834.1 [Brassica oleracea]                      (2)
                                                               /-100+                 
                                                               |    \----- GSBRNA2T00145022001 [Brassica napus]                    (68)
                                                          /-100+                      
                                                          |    |    /----- GSBRNA2T00047582001 [Brassica napus]                    (8)
                                                          |    \-100+                 
                                                    /-100-+         \----- XP_009121154.1 [Brassica rapa]                          (28)
                                                    |     |                           
                                                    |     |         /----- RrC1100_p6 [Raphanus raphanistrum]                      (31)
                                               /-100+     \---100---+                 
                                               |    |               \----- Rsa1.0_00352.1_g00008.1 [Raphanus sativus]              (59)
                                               |    |                                 
                                               |    \--------------------- 676777966 [Sisymbrium irio]                             (41)
                                               |                                      
                                               |                    /----- GSBRNA2T00147403001 [Brassica napus]                    (21)
                                          /-100+               /-100+                 
                                          |    |               |    \----- XP_009150852.1 [Brassica rapa]                          (29)
                                          |    |          /-100+                      
                                          |    |          |    |    /----- GSBRNA2T00125045001 [Brassica napus]                    (34)
                                          |    |          |    \-100+                 
                                          |    |          |         \----- XP_013629275.1 [Brassica oleracea]                      (36)
                                          |    \----100---+                           
                                     /-100+               |         /----- Rsa1.0_08072.1_g00002.1 [Raphanus sativus]              (30)
                                     |    |               |         |                 
                                     |    |               \---100---+----- RrC3152_p3 [Raphanus raphanistrum]                      (45)
                                     |    |                         |                 
                                /-100+    |                         \----- Rsa1.0_23065.1_g00001.1 [Raphanus sativus]              (65)
                                |    |    |                                           
                                |    |    \------------------------------- Tp3g30490 [Thellungiella parvula]                       (57)
                                |    |                                                
                                |    \------------------------------------ Thhalv10022536m [Eutrema salsugineum]                   (58)
                                |                                                     
                                |                              /---------- AT2G17150.1 [Arabidopsis thaliana]                      (6)
                           /-100+                              |                      
                           |    |                   /----100---+    /----- Araha.7578s0001.1.p [Arabidopsis halleri]               (9)
                           |    |                   |          \-100+                 
                           |    |                   |               \----- 875028 [Arabidopsis lyrata]                             (43)
                           |    |                   |                                 
                           |    |                   |               /----- Csa01g032730.1 [Camelina sativa]                        (11)
                           |    \--------100--------+          /-100+                 
                           |                        |          |    \----- Csa19g053930.1 [Camelina sativa]                        (15)
                           |                        |     /-100+                      
                /----100---+                        |     |    \---------- Csa15g074220.1 [Camelina sativa]                        (25)
                |          |                        |     |                           
                |          |                        \-100-+         /----- Carubv10012927m [Capsella rubella]                      (14)
                |          |                              |    /-100+                 
                |          |                              |    |    \----- Cagra.0805s0015.1.p [Capsella grandiflora]              (73)
                |          |                              \-87-+                      
                |          |                                   \---------- Bostr.18351s0175.1.p [Boechera stricta]                 (70)
                |          |                                                          
                |          \---------------------------------------------- AA33G00033 [Aethionema arabicum]                        (39)
                |                                                                     
                |                                         /--------------- Rsa1.0_00094.1_g00020.1 [Raphanus sativus]              (7)
                |                                         |                           
                |                                         |         /----- GSBRNA2T00130911001 [Brassica napus]                    (20)
                |                                   /-100-+    /-100+                 
                |                                   |     |    |    \----- XP_013604758.1 [Brassica oleracea]                      (74)
                |                                   |     \-100+                      
                |                                   |          |    /----- XP_009103570.1 [Brassica rapa]                          (51)
                |                                   |          \-100+                 
                |                                   |               \----- GSBRNA2T00121384001 [Brassica napus]                    (61)
                |                                   |                                 
                |                              /-100+               /----- XP_009138351.1 [Brassica rapa]                          (32)
                |                              |    |          /-100+                 
                |                              |    |          |    \----- GSBRNA2T00071498001 [Brassica napus]                    (71)
                |                              |    |     /-100+                      
                |                              |    |     |    |    /----- GSBRNA2T00100063001 [Brassica napus]                    (35)
                |                              |    |     |    \-100+                 
                |                         /-100+    \-100-+         \----- XP_013599251.1 [Brassica oleracea]                      (37)
           /-100+                         |    |          |                           
           |    |                         |    |          |         /----- Rsa1.0_00678.1_g00001.1 [Raphanus sativus]              (38)
           |    |                         |    |          \---100---+                 
           |    |                         |    |                    \----- RrC165_p9 [Raphanus raphanistrum]                       (47)
           |    |                    /-100+    |                                      
           |    |                    |    |    \-------------------------- 676721284 [Sisymbrium irio]                             (53)
           |    |                    |    |                                           
           |    |                    |    |                         /----- Rsa1.0_02421.1_g00001.1 [Raphanus sativus]              (60)
           |    |               /-88-+    \-----------100-----------+                 
           |    |               |    |                              \----- RrC392_p7 [Raphanus raphanistrum]                       (72)
           |    |               |    |                                                
           |    |          /-100+    \------------------------------------ Tp7g33050 [Thellungiella parvula]                       (40)
           |    |          |    |                                                     
           |    |          |    \----------------------------------------- Thhalv10024319m [Eutrema salsugineum]                   (76)
           |    |          |                                                          
           |    |          |                                        /----- Carubv10004068m [Capsella rubella]                      (16)
           |    |          |                              /---100---+                 
           |    |          |                              |         \----- Cagra.2350s0071.1.p [Capsella grandiflora]              (63)
      --100+    |          |                              |                           
           |    |    /-100-+                        /-100-+    /---------- Csa12g008230.1 [Camelina sativa]                        (22)
           |    |    |     |                        |     |    |                      
           |    |    |     |                        |     \-100+    /----- Csa10g006860.1 [Camelina sativa]                        (26)
           |    |    |     |                   /-99-+          \-100+                 
           |    |    |     |                   |    |               \----- Csa11g006520.1 [Camelina sativa]                        (33)
           |    |    |     |                   |    |                                 
           |    |    |     |                   |    \--------------------- Bostr.7867s1388.1.p [Boechera stricta]                  (62)
           |    \-100+     \--------100--------+                                      
           |         |                         |                    /----- Araha.0473s0001.1.p [Arabidopsis halleri]               (42)
           |         |                         |               /-100+                 
           |         |                         |               |    \----- 491122 [Arabidopsis lyrata]                             (54)
           |         |                         \------100------+                      
           |         |                                         \---------- AT4G35270.1 [Arabidopsis thaliana]                      (67)
           |         |                                                                
           |         \---------------------------------------------------- AA79G00017 [Aethionema arabicum]                        (75)
           |                                                                          
           |                                                        /----- XP_010548150.1 [Tarenaya hassleriana]                   (17)
           \---------------------------100--------------------------+                 
                                                                    \----- XP_010530951.1 [Tarenaya hassleriana]                   (66)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Gh_A12G0297 [Gossypium hirsutum]                        (1)
      |                                                                               
      |------------------------------------------------------------------- Cotton_A_02095_BGI-A2_v1.0 [Gossypium arboreum]         (13)
      |                                                                               
      |                                                           /------- (128)
      |                             /-------------100-------------+                   
      |                             |                             \------- evm.model.supercontig_20.206 [Carica papaya]            (64)
      |                             |                                                 
      |                             |                             /------- EcC048543.20 [Eucalyptus camaldulensis]                 (3)
      |                             |              /------100-----+                   
      |                             |              |              \------- Neem_23926_f_4 [Azadirachta indica]                     (10)
      |                     /--100--+              |                                  
      |                     |       |      /--100--+              /------- Eucgr.G01859.1.p [Eucalyptus grandis]                   (5)
      |                     |       |      |       |      /--100--+                   
      |                     |       |      |       |      |       \------- EcS571845.10 [Eucalyptus camaldulensis]                 (49)
      |                     |       |      |       \--100-+                           
      |                     |       |      |              \--------------- Eucgr.I01519.1.p [Eucalyptus grandis]                   (46)
      |                     |       \--100-+                                          
      |                     |              |                      /------- Ciclev10027765m [Citrus clementina]                     (4)
      +                     |              |              /--100--+                   
      |                     |              |              |       \------- orange1.1g004957m [Citrus sinensis]                     (44)
      |                     |              \------100-----+                           
      |                     |                             |       /------- Neem_11279_f_2 [Azadirachta indica]                     (19)
      |              /--100-+                             \--100--+                   
      |              |      |                                     \------- Neem_21949_f_1 [Azadirachta indica]                     (52)
      |              |      |                                                         
      |              |      |                                     /------- Cotton_A_00586_BGI-A2_v1.0 [Gossypium arboreum]         (24)
      |              |      |                             /--100--+                   
      |              |      |                             |       \------- Gh_A03G1857 [Gossypium hirsutum]                        (69)
      |              |      |-------------100-------------+                           
      |              |      |                             |       /------- Gorai.005G259100.1 [Gossypium raimondii]                (27)
      |      /--100--+      |                             \--100--+                   
      |      |       |      |                                     \------- Gh_D02G2296 [Gossypium hirsutum]                        (50)
      |      |       |      |                                                         
      |      |       |      \--------------------------------------------- Thecc1EG006453t1 [Theobroma cacao]                      (77)
      |      |       |                                                                
      |      |       |                                            /------- Gh_A01G1468 [Gossypium hirsutum]                        (12)
      |      |       |                                    /--100--+                   
      \--100-+       |                                    |       \------- Cotton_A_33891_BGI-A2_v1.0 [Gossypium arboreum]         (55)
             |       \-----------------100----------------+                           
             |                                            |       /------- Gorai.002G206700.1 [Gossypium raimondii]                (18)
             |                                            \--100--+                   
             |                                                    \------- Gh_D01G1705 [Gossypium hirsutum]                        (23)
             |                                                                        
             |                                                    /------- Gh_D12G0368 [Gossypium hirsutum]                        (48)
             \-------------------------100------------------------+                   
                                                                  \------- Gorai.008G041100.1 [Gossypium raimondii]                (56)