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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1957
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 116: /--------------------- Thhalv10009659m [Eutrema salsugineum] (2) | | /----- Rsa1.0_00020.1_g00033.1 [Raphanus sativus] (6) | /-100+ | | \----- RrC2318_p6 [Raphanus raphanistrum] (40) /---100---+ | | | /-100+ /----- GSBRNA2T00015227001 [Brassica napus] (13) | | | | | | | | \-100+----- XP_013603319.1 [Brassica oleracea] (31) | \-100-+ | | | \----- XP_009110631.1 [Brassica rapa] (37) | | | \--------------- Tp1g11220 [Thellungiella parvula] (39) | /-99-+ /---------- AT1G12630.1 [Arabidopsis thaliana] (8) | | | | | /------100------+ /----- 888596 [Arabidopsis lyrata] (32) | | | \-100+ | | | \----- 312283 [Arabidopsis lyrata] (43) | | | | | | /----- Cagra.0568s0175.1.p [Capsella grandiflora] (17) | | | /---100---+ | \-100+ | \----- Carubv10012147m [Capsella rubella] (76) | | | /-----------100-----------+ | /--84-+ /---------- Csa21773s010.1 [Camelina sativa] (28) | | | | | | | | | | \-50-+ /----- Csa14g015550.1 [Camelina sativa] (45) | | | | | | | | \-100+ \-65-+----- Csa17g016840.1 [Camelina sativa] (54) | | | | | | | \----- Csa03g016390.1 [Camelina sativa] (60) | | | | | \--------------------- Bostr.13671s0198.1.p [Boechera stricta] (50) | | | \------------------------------------ KFK43528.1 [Arabis alpina] (11) | | /----- 856016 [Arabidopsis lyrata] (3) | /------100------+ | | \----- 875616 [Arabidopsis lyrata] (73) | | | | /----- Csa16g055760.1 [Camelina sativa] (24) | /-----------100----------+ /-84-+ | | | | \----- Csa09g097750.1 [Camelina sativa] (62) | | | /-100+ | | | | \---------- Csa07g064370.1 [Camelina sativa] (77) | | \--99-+ | | | /----- Cagra.6357s0007.1.p [Capsella grandiflora] (67) | | \---100---+ | | \----- Carubv10022214m [Capsella rubella] (74) | | | | /----- 676708480 [Sisymbrium irio] (15) --100+ | /-100+ | | | \----- Tp2g01540 [Thellungiella parvula] (59) | /-100-+ /--------------93--------------+ | | | | \---------- KFK40547.1 [Arabis alpina] (44) | | | | | | | | /--------------- Rsa1.0_01006.1_g00016.1 [Raphanus sativus] (21) | | | | | | | | | | /----- GSBRNA2T00092568001 [Brassica napus] (42) | | | | /-100-+ | | | | | | | /-100+----- XP_009112986.1 [Brassica rapa] (66) | | | | | | | | | | | | | \-94-+ \----- XP_009112987.1 [Brassica rapa] (68) | | | | /-84-+ | | | | | | | \---------- GSBRNA2T00097419001 [Brassica napus] (49) | | \-90-+ | | | | | /-92-+ \--------------------- 676708478 [Sisymbrium irio] (23) | | | | | | | | | \-------------------------- Tp2g01530 [Thellungiella parvula] (25) | /-100+ | | | | | | /-95-+ /----- Rsa1.0_00086.1_g00008.1 [Raphanus sativus] (34) | | | | | | /---100---+ | | | | | | | \----- RrC1474_p2 [Raphanus raphanistrum] (56) | | | | | | | | | | | | \------100------+ /----- XP_013609898.1 [Brassica oleracea] (41) | | | | | | /-100+ | | | \-64-+ | | \----- GSBRNA2T00082091001 [Brassica napus] (70) | | | | \-100+ \-70-+ | | | /----- GSBRNA2T00082983001 [Brassica napus] (47) | | | \-95-+ | | | \----- XP_009113026.1 [Brassica rapa] (63) | | | | | \------------------------------------ Thhalv10023678m [Eutrema salsugineum] (33) | | | \---------------------------------------------------- AA53G01387 [Aethionema arabicum] (57) | \--------------------------------------------------------- XP_010546017.1 [Tarenaya hassleriana] (9) Root part of tree: /------------------------------------------------------------------- Cotton_A_09977_BGI-A2_v1.0 [Gossypium arboreum] (1) | |------------------------------------------------------------------- Gh_A08G1612 [Gossypium hirsutum] (48) | | /----------------------------------------- (116) | | | | /----- EcS702777.10 [Eucalyptus camaldulensis] (4) | | /--------------100-------------+ | | | \----- Eucgr.D01924.1.p [Eucalyptus grandis] (10) | | | | | | /----- orange1.1g028004m [Citrus sinensis] (5) | | | /-100+ | /-100+ | | \----- Ciclev10005869m [Citrus clementina] (52) | | | | /-------94------+ | | | | | \---------- Neem_11593_f_1 [Azadirachta indica] (19) | | | | | | | | | | /----- Gh_D09G1705 [Gossypium hirsutum] (18) | | | | | /-83-+ | | | | | | \----- Gorai.006G197200.1 [Gossypium raimondii] (35) | | \-100+ | /-100+ | | | | | | /----- Gh_A09G1607 [Gossypium hirsutum] (69) | | | | | \-68-+ | | | | /-100-+ \----- Cotton_A_21586_BGI-A2_v1.0 [Gossypium arboreum] (72) | | | | | | | | | /-84-+ | \--------------- Thecc1EG015083t1 [Theobroma cacao] (71) | | | | | | | | | | |-100+ /----- Gorai.007G010200.1 [Gossypium raimondii] (26) | | | | | | /-96-+ | /-100-+ | | | | | \----- Gh_D11G0086 [Gossypium hirsutum] (29) + | | | | | \----100---+ | | | \-100+ | | /----- Cotton_A_07546_BGI-A2_v1.0 [Gossypium arboreum] (27) | | | | | \-69-+ | | | | | \----- Gh_A11G0082 [Gossypium hirsutum] (65) | | | | | | | | | \-------------------------- Eucgr.K00220.1.p [Eucalyptus grandis] (64) | | | | | | | \------------------------------- Eucgr.A02817.1.p [Eucalyptus grandis] (36) | | | | | | /----- orange1.1g030591m [Citrus sinensis] (7) | /-61-+ | /-100+ | | | | | \----- Ciclev10023840m [Citrus clementina] (20) | | | | /-58-+ | | | | | \---------- Neem_4567_f_1 [Azadirachta indica] (75) | | | \--------------99--------------+ | | | \--------------- evm.model.supercontig_74.86 [Carica papaya] (38) | | | | | | /----- Gh_D03G1485 [Gossypium hirsutum] (16) | | | /-100+ | | | | \----- Gorai.003G162600.1 [Gossypium raimondii] (55) | | \-------------------100-------------------+ | /-100+ | /----- Cotton_A_23602_BGI-A2_v1.0 [Gossypium arboreum] (53) | | | \-98-+ | | | \----- Gh_A03G2016 [Gossypium hirsutum] (58) | | | | | | /----- Cotton_A_14438_BGI-A2_v1.0 [Gossypium arboreum] (12) | | | /-99-+ | | | | \----- Gh_A12G2058 [Gossypium hirsutum] (61) | | | /-100+ \-100+ | | | /----- Gorai.008G243700.1 [Gossypium raimondii] (30) | | | \-100+ | \--------------------70-------------------+ \----- Gh_D12G2236 [Gossypium hirsutum] (46) | | | \--------------- Thecc1EG016176t1 [Theobroma cacao] (14) | | /----- Gh_D08G1922 [Gossypium hirsutum] (22) \---------------------------100--------------------------+ \----- Gorai.004G208000.1 [Gossypium raimondii] (51) |