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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1924
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/------------------------------------------------------------------- Rsa1.0_01955.1_g00002.1 [Raphanus sativus] (1) | | /----- XP_009102241.1 [Brassica rapa] (8) | /------100------+ | | \----- GSBRNA2T00077453001 [Brassica napus] (21) | | | | /---------- GSBRNA2T00027352001 [Brassica napus] (22) |---------------------100---------------------+ | | | /-70-+ /----- GSBRNA2T00027354001 [Brassica napus] (44) | | | \-99-+ | \-100-+ \----- XP_013594354.1 [Brassica oleracea] (47) | | | \--------------- XP_013597141.1 [Brassica oleracea] (50) | | /----- 900233 [Arabidopsis lyrata] (2) | /-100+ | | \----- Araha.20504s0001.1.p [Arabidopsis halleri] (36) | /------100------+ | | \---------- AT2G18490.1 [Arabidopsis thaliana] (37) | | | | /----- Csa01g041630.1 [Camelina sativa] (7) | | /-100+ | | | \----- Csa19g058110.1 [Camelina sativa] (31) | | /-100+ | /-99-+ | \---------- Csa15g078130.1 [Camelina sativa] (35) | | | | | | | /--99-+ /----- Carubv10016477m [Capsella rubella] (14) | | | | | /-100+ | | | | | | \----- Cagra.6034s0007.1.p [Capsella grandiflora] (40) | | | | \-82-+ | | \-99-+ | /----- Carubv10015674m [Capsella rubella] (48) | | | \-99-+ | | | \----- Carubv10016400m [Capsella rubella] (56) | /-86-+ | | | | \--------------------- Bostr.18351s0316.1.p [Boechera stricta] (42) | | | | | | /----- Carubv10015875m [Capsella rubella] (10) | | | /-100+ | | | | \----- Csa15g071680.1 [Camelina sativa] (51) | | | /-100+ | | | | \---------- Bostr.18351s0050.1.p [Boechera stricta] (15) | | | | | | \-------98------+ /---------- AT2G15740.1 [Arabidopsis thaliana] (20) | | | | | | \-100+ /----- 899797 [Arabidopsis lyrata] (24) | | \-100+ | | \----- Araha.0005s0004.1.p [Arabidopsis halleri] (34) | | | | /----- orange1.1g044394m [Citrus sinensis] (3) | | /-58-+ | /----77---+ | \----- Neem_2269_f_2 [Azadirachta indica] (27) | | | /-77-+ | | | | \---------- evm.model.supercontig_235.19 [Carica papaya] (53) | | | /--75-+ + | | | | /----- Cagra.2968s0004.1.p [Capsella grandiflora] (28) | | | | \---100---+ | | | | \----- Carubv10025077m [Capsella rubella] (32) | | | /-76-+ | | | | | /--------------- Csa20g067010.1 [Camelina sativa] (39) | | | | | | | | | | | | /----- Cagra.0604s0001.1.p [Capsella grandiflora] (43) | | | | \--99-+ /-100+ | | | /-77-+ | | \----- Carubv10027554m [Capsella rubella] (52) | | | | | \-100+ | | | | | \---------- Carubv10028582m [Capsella rubella] (46) | | | | | | | \-77-+ \-------------------------- 917370 [Arabidopsis lyrata] (41) | | | | | | /----- Araha.5131s0009.1.p [Arabidopsis halleri] (4) | | \------------92-----------+ | | \----- AT5G42640.1 [Arabidopsis thaliana] (17) | | | | /----- XP_009120616.1 [Brassica rapa] (5) | | /-100+ | /--99-+ | \----- GSBRNA2T00007305001 [Brassica napus] (38) | | | /-100+ | | | | | /----- GSBRNA2T00036743001 [Brassica napus] (6) | | | | \-100+ | | | /--99-+ \----- XP_013610242.1 [Brassica oleracea] (33) | | | | | | | | /-98-+ \--------------- Rsa1.0_13006.1_g00002.1 [Raphanus sativus] (45) | | | | | | | | /-98-+ \--------------------- 676741680 [Sisymbrium irio] (9) | | | | | | | | /-98-+ \-------------------------- Tp6g22400 [Thellungiella parvula] (13) | | | | | | | | | \------------------------------- Thhalv10015522m [Eutrema salsugineum] (57) | | | | | | | | /----- 910303 [Arabidopsis lyrata] (11) | | | | /-100+ | | | /-90-+ | \----- Araha.23900s0001.1.p [Arabidopsis halleri] (54) | | | | | /----100---+ | /-100+ | | | | \---------- AT5G22990.1 [Arabidopsis thaliana] (18) | | | | | | | | | | | | | | /--------------- Bostr.10199s0147.1.p [Boechera stricta] (16) | | | | | \------92------+ | | | | | | | | /---------- Csa20g037900.1 [Camelina sativa] (19) | | | | | | | | | | | \-88-+ | |-93-+ /----- Csa13g027590.1 [Camelina sativa] (23) | | | | \--92-+ \-86-+ | | | | | \----- Csa08g017340.1 [Camelina sativa] (26) | | | | | | /-100+ | | | /----- Carubv10002800m [Capsella rubella] (30) | | | | | \---100---+ | | | | | \----- Cagra.3954s0034.1.p [Capsella grandiflora] (58) | | | | | | | | | \----------------------------------------- XP_010536019.1 [Tarenaya hassleriana] (29) | | | | \-100+ | | /----- KFK40216.1 [Arabis alpina] (12) | | \----------------------72----------------------+ | | \----- Thhalv10023174m [Eutrema salsugineum] (25) | | | \--------------------------------------------------------- Tp3g31950 [Thellungiella parvula] (49) | \-------------------------------------------------------------- 676718922 [Sisymbrium irio] (55) |