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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1916
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 120: /---------- AT1G75710.1 [Arabidopsis thaliana] (2) | /----100---+ /----- Araha.10772s0009.1.p [Arabidopsis halleri] (20) | \-100+ | \----- 476719 [Arabidopsis lyrata] (73) | | /---------- Csa07g047180.1 [Camelina sativa] (19) | | | /-100+ /----- Csa16g039700.1 [Camelina sativa] (48) /-100+ | \-99-+ | | | \----- Csa09g080340.1 [Camelina sativa] (77) | |--72-+ | | | /----- Carubv10020159m [Capsella rubella] (37) | | \---100---+ /------90------+ | \----- Cagra.0799s0042.1.p [Capsella grandiflora] (57) | | | | | \--------------------- Bostr.20129s0005.1.p [Boechera stricta] (32) | | | \-------------------------- KFK42002.1 [Arabis alpina] (55) | | /----- Rsa1.0_00434.1_g00014.1 [Raphanus sativus] (8) | /---100---+ | | \----- RrC27228_p1 [Raphanus raphanistrum] (29) | | | /------100------+ /----- GSBRNA2T00067196001 [Brassica napus] (14) | | | /-100+ | | | | \----- XP_009128127.1 [Brassica rapa] (69) | | \-100+ /-100+ | | /----- XP_013616458.1 [Brassica oleracea] (43) | | | \-100+ | | | \----- GSBRNA2T00077881001 [Brassica napus] (44) | | | | | | /----- Rsa1.0_00014.1_g00024.1 [Raphanus sativus] (12) | | | /---100---+ | | /-51-+ | \----- RrC360_p5 [Raphanus raphanistrum] (76) | | | | | | | | | /-100-+ /----- XP_009106219.1 [Brassica rapa] (22) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00087561001 [Brassica napus] (31) /-100-+ | | | | \-100+ | | | | | /-95-+ | /----- XP_013592738.1 [Brassica oleracea] (66) | | \-65-+ | | | \-100+ | | | | | | \----- GSBRNA2T00103682001 [Brassica napus] (70) | | | \-50-+ | | | | | \--------------------- 676737216 [Sisymbrium irio] (53) | | | | /-100+ | | \-------------------------- Tp5g30820 [Thellungiella parvula] (79) | | | | | | | \------------------------------------ Thhalv10018514m [Eutrema salsugineum] (27) | | | | | \---------------------------------------------- AA31G00384 [Aethionema arabicum] (51) | | /-92-+ | /----- XP_010539850.1 [Tarenaya hassleriana] (5) | | \----------------------100---------------------+ | | \----- XP_010533772.1 [Tarenaya hassleriana] (75) | | | | /----- EcC011684.10 [Eucalyptus camaldulensis] (3) | \------------------------100------------------------+ | \----- Eucgr.F01643.1.p [Eucalyptus grandis] (23) | | /----- Cotton_A_26019_BGI-A2_v1.0 [Gossypium arboreum] (4) | /-100+ | | \----- Gh_A01G0902 [Gossypium hirsutum] (62) | /----100---+ | | | /----- Gorai.002G123600.1 [Gossypium raimondii] (34) | | \-98-+ --98-+ | \----- Gh_D01G0942 [Gossypium hirsutum] (64) | | | | /----- Gh_D05G1782 [Gossypium hirsutum] (46) | /-100+ /-100+ | | | | \----- Gorai.009G195000.1 [Gossypium raimondii] (49) | | | /-100+ | | | | | /----- Gh_A05G1595 [Gossypium hirsutum] (54) | | | | \-100+ | | \--90-+ \----- Cotton_A_16420_BGI-A2_v1.0 [Gossypium arboreum] (65) | /-59-+ | | | | \--------------- Thecc1EG034215t1 [Theobroma cacao] (80) | | | | | | /----- orange1.1g047748m [Citrus sinensis] (30) | | | /-100+ \--------------100-------------+ | | \----- Ciclev10001255m [Citrus clementina] (67) | \------100------+ | \---------- Neem_6527_f_3 [Azadirachta indica] (33) | \------------------------------- evm.model.supercontig_26.33 [Carica papaya] (28) Subtree rooted at node 140: /--------------------------------------------------------- (120) | | /----- Csa03g051550.1 [Camelina sativa] (7) | /-100+ | | \----- Csa14g051750.1 [Camelina sativa] (68) | /-100+ | | | /----- Carubv10009224m [Capsella rubella] (45) | | \-100+ | /-100-+ \----- Cagra.1843s0002.1.p [Capsella grandiflora] (56) | | | | /------100-----+ \--------------- Bostr.15654s0049.1.p [Boechera stricta] (9) | | | | | \--------------------- 882294 [Arabidopsis lyrata] (35) | | | | /----- XP_013600340.1 [Brassica oleracea] (10) | | /-100+ | | | \----- XP_009107404.1 [Brassica rapa] (40) | | /-100+ | | | \---------- Rsa1.0_00536.1_g00008.1 [Raphanus sativus] (41) /-100+ | /----55----+ | | /-100+ | \--------------- 676790246 [Sisymbrium irio] (72) | | | | | | | | | | /---------- XP_013592621.1 [Brassica oleracea] (11) | | | | | | | | | | | | /----- XP_009118945.1 [Brassica rapa] (13) | | | | /-59-+ /-100+-100+ | | | | | | | | \----- GSBRNA2T00122908001 [Brassica napus] (24) | | | | | | | | | | /-93-+ | | | /-100-+ \---------- GSBRNA2T00013253001 [Brassica napus] (25) | | | | | | | | | | | | | \-100+ \-89-+ \--------------- Rsa1.0_00742.1_g00008.1 [Raphanus sativus] (59) --100+ | | | | | | | | | | \--------------------- Thhalv10011499m [Eutrema salsugineum] (74) | | /-100-+ | | | | | | | \------------------------------- Tp1g34830 [Thellungiella parvula] (18) | | | | | | | | | \----------------------------------------- KFK29074.1 [Arabis alpina] (47) | \-100+ | | | \---------------------------------------------- AA579G00001 [Aethionema arabicum] (42) | | | \---------------------------------------------------- XP_010533365.1 [Tarenaya hassleriana] (36) | \-------------------------------------------------------------- XP_010544461.1 [Tarenaya hassleriana] (71) Root part of tree: /------------------------------------------------------------------- Eucgr.F03752.1.p [Eucalyptus grandis] (1) | |------------------------------------------------------------------- EcS663236.10 [Eucalyptus camaldulensis] (61) | | /----------------------------------------------------------- (140) | | | | /--------------------------------- Thecc1EG035046t1 [Theobroma cacao] (6) | | | + | | /----------------- Gh_D06G0380 [Gossypium hirsutum] (15) | | | | | | | | /-------- Gh_A06G0349 [Gossypium hirsutum] (26) | | /---100--+ /--100--+---100--+ | | | | | | \-------- Cotton_A_18465_BGI-A2_v1.0 [Gossypium arboreum] (50) | | | | | | | | | | | \----------------- Gorai.010G048000.1 [Gossypium raimondii] (38) \--100--+ | \---82--+ | | | /-------- Gh_D05G2208 [Gossypium hirsutum] (16) | | | /---63---+ | | | | \-------- Gorai.009G243200.1 [Gossypium raimondii] (60) | /---92--+ \--100--+ | | | | /-------- Cotton_A_16124_BGI-A2_v1.0 [Gossypium arboreum] (21) | | | \---91---+ | | | \-------- Gh_A05G2001 [Gossypium hirsutum] (39) | | | | | | /-------- Neem_3186_f_6 [Azadirachta indica] (17) | | | /---100--+ \---97---+ | | \-------- Neem_20625_f_2 [Azadirachta indica] (78) | \-----------100----------+ | | /-------- orange1.1g014111m [Citrus sinensis] (58) | \---100--+ | \-------- Ciclev10001224m [Citrus clementina] (63) | \-------------------------------------------------- evm.model.supercontig_36.12 [Carica papaya] (52) |