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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1782
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 144: /--------------- Rsa1.0_00058.1_g00008.1 [Raphanus sativus] (3) | | /----- GSBRNA2T00015984001 [Brassica napus] (10) /--81-+ /-100+ | | | \----- XP_009122445.1 [Brassica rapa] (16) | \-99-+ /-100+ \---------- XP_013606794.1 [Brassica oleracea] (62) | | | \--------------------- KFK25193.1 [Arabis alpina] (50) | | /---------- GSBRNA2T00129692001 [Brassica napus] (14) | | | |---------- XP_009131055.1 [Brassica rapa] (42) /-100+ /-100+ | | | | /----- XP_013630257.1 [Brassica oleracea] (67) | | | \-100+ | | /-100-+ \----- GSBRNA2T00134540001 [Brassica napus] (84) | | | | | | | | /----- Rsa1.0_09702.1_g00001.1 [Raphanus sativus] (31) | | | \---100---+ | \-60-+ \----- RrC1078_p3 [Raphanus raphanistrum] (77) | | | | /----- Tp6g34620 [Thellungiella parvula] (30) | \-------84------+ | \----- 676744174 [Sisymbrium irio] (74) | /-53-+ /----- Rsa1.0_00657.1_g00006.1 [Raphanus sativus] (11) | | /---100---+ | | | \----- RrC32_p14 [Raphanus raphanistrum] (63) | | | | |-------91------+ /----- GSBRNA2T00080768001 [Brassica napus] (21) | | | /-63-+ | | | | \----- XP_013621571.1 [Brassica oleracea] (81) | | \-100+ | | | /----- GSBRNA2T00071649001 [Brassica napus] (32) | | \-87-+ | | \----- XP_009125727.1 [Brassica rapa] (45) | | | \------------------------------- Thhalv10014503m [Eutrema salsugineum] (73) | | /----- Carubv10001850m [Capsella rubella] (17) | /---100---+ | | \----- Cagra.1365s0040.1.p [Capsella grandiflora] (24) | | /-70-+ /--62-+ /----- Csa13g010370.1 [Camelina sativa] (40) | | | | /-98-+ | | | | | \----- Csa20g011780.1 [Camelina sativa] (53) | | /-64-+ \-63-+ | | | | \---------- Csa08g056030.1 [Camelina sativa] (56) | | | | | |----64---+ \--------------------- Bostr.13129s0127.1.p [Boechera stricta] (34) | | | | | | /----- 908782 [Arabidopsis lyrata] (48) | | \---------100--------+ | | \----- AT5G08330.1 [Arabidopsis thaliana] (78) | | | | /----- Neem_3188_f_1 [Azadirachta indica] (20) /-80-+ | /------100------+ | | | | \----- Thecc1EG042116t1 [Theobroma cacao] (33) | | | | | | | | /----- Gh_A13G2021 [Gossypium hirsutum] (29) | | | | /-80-+ | | \------100-----+ | \----- Cotton_A_10509_BGI-A2_v1.0 [Gossypium arboreum] (37) | | | /-100+ | | | | | /----- Gorai.013G268200.1 [Gossypium raimondii] (35) | | | | \-66-+ | | \--51-+ \----- Gh_D13G2419 [Gossypium hirsutum] (76) | | | | | \--------------- XP_010535618.1 [Tarenaya hassleriana] (47) | | | \----------------------------------------- AA44G00156 [Aethionema arabicum] (4) | | /---------- Gh_D13G0602 [Gossypium hirsutum] (5) | | | | /----- Cotton_A_26482_BGI-A2_v1.0 [Gossypium arboreum] (28) | /-98-+-96-+ | | | \----- Gh_A13G0528 [Gossypium hirsutum] (68) | | | | | \---------- Gorai.013G068600.1 [Gossypium raimondii] (52) /--53-+ | | | | /----- Gh_D12G1337 [Gossypium hirsutum] (23) | | | /-95-+ | | /--57-+ | \----- Gorai.008G147800.1 [Gossypium raimondii] (55) | | | |-100+ | | | | | /----- Gh_A12G1214 [Gossypium hirsutum] (36) | | | | \-77-+ | | | | \----- Cotton_A_14593_BGI-A2_v1.0 [Gossypium arboreum] (44) | | | | | | /-91-+ \--------------- Thecc1EG007700t1 [Theobroma cacao] (60) | | | | | | | | /----- Gh_D02G1925 [Gossypium hirsutum] (7) | | | | /-99-+ | | | | | \----- Gorai.005G211900.1 [Gossypium raimondii] (25) | | | \----100---+ | | | | /----- Gh_A03G1464 [Gossypium hirsutum] (18) /-96-+ | /-91-+ \-100+ | | | | | \----- Cotton_A_08973_BGI-A2_v1.0 [Gossypium arboreum] (66) | | | | | | | | | | /---------- Neem_10310_f_2 [Azadirachta indica] (12) | | | | | | | | | | | /-100+ /----- orange1.1g024547m [Citrus sinensis] (26) | | \------91------+ | | \-100+ | | | \----79----+ \----- Ciclev10032441m [Citrus clementina] (54) | | | | | | | \--------------- evm.model.supercontig_60.75 [Carica papaya] (82) | | | | | | /----- XP_010546439.1 [Tarenaya hassleriana] (71) /-97-+ | \-----------100-----------+ | | | \----- XP_010521856.1 [Tarenaya hassleriana] (72) | | | | | \---------------------------------------------------- AA5G00219 [Aethionema arabicum] (19) | | | | /---------- GSBRNA2T00086429001 [Brassica napus] (41) | | | | | /-100+ /----- XP_013618051.1 [Brassica oleracea] (43) --56-+ | | \-100+ | | /-100-+ \----- GSBRNA2T00071717001 [Brassica napus] (49) | | | | | \----------------100----------------+ \--------------- XP_009130117.1 [Brassica rapa] (46) | | | \--------------------- Rsa1.0_05545.1_g00002.1 [Raphanus sativus] (61) | \-------------------------------------------------------------- Tp2g23870 [Thellungiella parvula] (13) Root part of tree: /------------------------------------------------------------------- XP_009141469.1 [Brassica rapa] (1) | |------------------------------------------------------------------- GSBRNA2T00094728001 [Brassica napus] (39) | | /------ XP_013597847.1 [Brassica oleracea] (2) | /-100-+ | | \------ GSBRNA2T00082683001 [Brassica napus] (22) | /-100-+ | | | /------ GSBRNA2T00147414001 [Brassica napus] (38) | | \--95-+ | /--------------100-------------+ \------ XP_009150861.1 [Brassica rapa] (64) | | | | | \------------------ Rsa1.0_00302.1_g00018.1 [Raphanus sativus] (80) | | | | /------------------------------------------- (144) | | | | | | /------ Csa20g038220.1 [Camelina sativa] (6) | | | /--92-+ | | | | \------ Csa13g027860.1 [Camelina sativa] (15) | | | /-100-+ + | | | \------------ Csa08g017630.1 [Camelina sativa] (83) | | | /-100-+ | | | | | /------ Carubv10001541m [Capsella rubella] (8) | |--90-+ | \----100----+ | /--99-+ | | \------ Cagra.4348s0009.1.p [Capsella grandiflora] (9) | | | | /--76-+ | | | | | | /------------ AT5G23280.1 [Arabidopsis thaliana] (27) | | | | | | | | | | | | \-----86----+ /------ 489189 [Arabidopsis lyrata] (59) | | | | /--100-+ \--53-+ | | | | | | \------ Araha.9462s0010.1.p [Arabidopsis halleri] (69) | | | | | | | | | \--51-+ \------------------------------ Bostr.10199s0106.1.p [Boechera stricta] (51) | /-100-+ | | | | | | | /------ Thhalv10004796m [Eutrema salsugineum] (57) | | | | \--------------59--------------+ | | | | \------ KFK39192.1 [Arabis alpina] (65) | | | | | | | \------------------------------------------------- 676729508 [Sisymbrium irio] (58) | | | \--85-+ | /------ Rsa1.0_00056.1_g00052.1 [Raphanus sativus] (70) | \-----------------------99-----------------------+ | \------ RrC4527_p3 [Raphanus raphanistrum] (85) | |------------------------------------------------------------- XP_013606593.1 [Brassica oleracea] (75) | \------------------------------------------------------------- GSBRNA2T00146105001 [Brassica napus] (79) |