PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1779
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 149: /----- Rsa1.0_00703.1_g00004.1 [Raphanus sativus] (8) /-100+ | \----- RrC2305_p2 [Raphanus raphanistrum] (11) /-68-+ | \---------- GSBRNA2T00125310001 [Brassica napus] (67) /----100---+ | | /----- XP_009134895.1 [Brassica rapa] (28) | \---100---+ | \----- GSBRNA2T00111860001 [Brassica napus] (44) | | /--------------- GSBRNA2T00027078001 [Brassica napus] (18) /-98-+ | | | | /----- XP_013638316.1 [Brassica oleracea] (37) | | /-100-+ /-100+ | | | | | \----- GSBRNA2T00120085001 [Brassica napus] (76) | | | \-100+ | \-100+ \---------- XP_009129667.1 [Brassica rapa] (57) | | | | /----- Rsa1.0_02180.1_g00003.1 [Raphanus sativus] (33) /-100+ \------100------+ | | \----- RrC53_p3 [Raphanus raphanistrum] (42) | | | | /----- Rsa1.0_00030.1_g00013.1 [Raphanus sativus] (31) | | /---100---+ | | | \----- RrC2860_p1 [Raphanus raphanistrum] (47) | | | /-100+ \------100------+ /----- GSBRNA2T00006039001 [Brassica napus] (71) | | | /-100+ | | | | \----- XP_009124920.1 [Brassica rapa] (81) | | \-100+ /-100+ | \---------- XP_013623284.1 [Brassica oleracea] (82) | | | | | \------------------------------------ 676720476 [Sisymbrium irio] (83) /-100-+ | | | \----------------------------------------- Tp3g05330 [Thellungiella parvula] (40) | | | \---------------------------------------------- Thhalv10020686m [Eutrema salsugineum] (32) | | /----- Cagra.0922s0006.1.p [Capsella grandiflora] (14) | /---100---+ | | \----- Carubv10013665m [Capsella rubella] (56) /-86-+ | | | /-100-+ /----- Csa19g010070.1 [Camelina sativa] (15) | | | | /-97-+ | | | | | \----- Csa01g007430.1 [Camelina sativa] (65) | | /-86-+ \-100+ | | | | \---------- Csa15g007970.1 [Camelina sativa] (17) | | | | | | | \--------------------- Bostr.2570s0019.1.p [Boechera stricta] (63) /-86-+ \------------86-----------+ | | | /---------- AT3G06410.1 [Arabidopsis thaliana] (64) | | | | | | \-------90------+ /----- 477944 [Arabidopsis lyrata] (85) | | \-100+ --85-+ | \----- Araha.6616s0011.1.p [Arabidopsis halleri] (86) | | | \--------------------------------------------------------- KFK38099.1 [Arabis alpina] (69) | \-------------------------------------------------------------- AA29G00028 [Aethionema arabicum] (79) Subtree rooted at node 154: /----- XP_010524751.1 [Tarenaya hassleriana] (2) /-64-+ | \----- XP_010546925.1 [Tarenaya hassleriana] (72) /----------------------100---------------------+ | \---------- XP_010558473.1 [Tarenaya hassleriana] (7) | | /----- XP_013622850.1 [Brassica oleracea] (4) | /-100+ | | \----- GSBRNA2T00140710001 [Brassica napus] (16) | /-100+ | | | /----- XP_009131673.1 [Brassica rapa] (38) | | \-100+ | | \----- GSBRNA2T00149029001 [Brassica napus] (60) | /-100-+ | | | /---------- Rsa1.0_52763.1_g00001.1 [Raphanus sativus] (53) | | | | | | \-100+ /----- Rsa1.0_03446.1_g00003.1 [Raphanus sativus] (75) | /----83---+ \-84-+ | | | \----- RrC38_p5 [Raphanus raphanistrum] (84) | | | | | \--------------------- 676708078 [Sisymbrium irio] (24) | | | | /----- GSBRNA2T00078356001 [Brassica napus] (5) | | /-100+ | | | \----- XP_013606670.1 [Brassica oleracea] (12) | | /-100+ | | | | /----- GSBRNA2T00154398001 [Brassica napus] (54) | | | \-99-+ | | /-100-+ \----- XP_009120963.1 [Brassica rapa] (59) | /-100+ | | | | | | | /----- RrC5597_p1 [Raphanus raphanistrum] (50) | | | | \---100---+ | | | | \----- Rsa1.0_00284.1_g00025.1 [Raphanus sativus] (51) | | | /-91-+ | | | | | /----- Rsa1.0_00550.1_g00011.1 [Raphanus sativus] (20) | | | | | /---100---+ /-100+ | | | | | \----- RrC4325_p1 [Raphanus raphanistrum] (55) | | | | | | | | | | | | \-100-+ /----- GSBRNA2T00114745001 [Brassica napus] (25) | | /-100+ | | | /-100+ | | | | \-99-+ | | \----- XP_013616843.1 [Brassica oleracea] (74) | | | | | \-92-+ | | | | | | /----- GSBRNA2T00023127001 [Brassica napus] (34) | | | | | \-100+ | | | | | \----- XP_009126264.1 [Brassica rapa] (39) | | | | | | | | | \-------------------------- Tp6g25780 [Thellungiella parvula] (66) | | | | | | | \------------------------------------ Thhalv10013460m [Eutrema salsugineum] (45) | | | | | | /----- 488738 [Arabidopsis lyrata] (6) | | | /-100+ | | /-100+ | \----- Araha.4425s0032.1.p [Arabidopsis halleri] (41) | | | | /---------100--------+ | | | | | \---------- AT5G18550.1 [Arabidopsis thaliana] (30) | | | | | | | | | | /----- Csa13g021460.1 [Camelina sativa] (26) | | | | | /-100+ --71-+ | | | | | \----- Csa13g021450.1 [Camelina sativa] (27) | | | | | /-100+ | | | | /-100+ | \---------- Csa08g011090.1 [Camelina sativa] (73) | | | | | | /-100-+ | | /--86-+ | | | | \--------------- Csa20g026940.1 [Camelina sativa] (80) | | | | | | | /-100+ | | | | | | | | | /----- Cagra.0712s0020.1.p [Capsella grandiflora] (29) | | | | \-72-+ | | \------100------+ | | | | | \-100+ \----- Carubv10000876m [Capsella rubella] (77) | | | | | | | \-84-+ | | \-------------------------- Bostr.26527s0356.1.p [Boechera stricta] (70) | | | | | | | \------------------------------------ KFK26093.1 [Arabis alpina] (10) | | | | | \---------------------------------------------- AA40G00257 [Aethionema arabicum] (36) | | | \---------------------------------------------------- (149) | | /----- EcC045502.50 [Eucalyptus camaldulensis] (13) | /-100+ | | \----- Eucgr.H03871.1.p [Eucalyptus grandis] (43) \-------------------------77------------------------+ \---------- Eucgr.B01280.1.p [Eucalyptus grandis] (22) Root part of tree: /------------------------------------------------------------------- Gh_D01G2271 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Gorai.002G027000.1 [Gossypium raimondii] (61) | | /----------------------------- (154) | | | | /---------- Ciclev10004882m [Citrus clementina] (3) | /---100--+ /---100--+ | | | | \---------- orange1.1g011853m [Citrus sinensis] (78) | | \---100---+ | /----70---+ \------------------- Neem_2496_f_3 [Azadirachta indica] (48) | | | + | \-------------------------------------- Thecc1EG021166t1 [Theobroma cacao] (49) | | | | /---------- Gh_A10G1439 [Gossypium hirsutum] (9) | | /---100--+ | /---100--+ | \---------- Cotton_A_34319_BGI-A2_v1.0 [Gossypium arboreum] (58) | | | /---100---+ | | | | | /---------- Gorai.011G188400.1 [Gossypium raimondii] (35) | | | | \---92---+ | | | | \---------- Gh_D10G1681 [Gossypium hirsutum] (62) | | \--------98--------+ | | | /---------- Gorai.005G058800.1 [Gossypium raimondii] (21) | | | /---100--+ \---100---+ | | \---------- Gh_D02G0519 [Gossypium hirsutum] (23) | \---100---+ | | /---------- Gh_A02G0464 [Gossypium hirsutum] (46) | \---100--+ | \---------- Cotton_A_04878_BGI-A2_v1.0 [Gossypium arboreum] (52) | | /---------- Cotton_A_17824_BGI-A2_v1.0 [Gossypium arboreum] (19) \----------------------93----------------------+ \---------- Gh_A01G0196 [Gossypium hirsutum] (68) |