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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1765
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Subtree rooted at node 97: /---------- Csa03g013650.1 [Camelina sativa] (2) | /-100+ /----- Csa14g011720.1 [Camelina sativa] (51) | \-68-+ | \----- Csa17g013860.1 [Camelina sativa] (71) /--99-+ | | /----- Cagra.4395s0212.1.p [Capsella grandiflora] (65) | \---100---+ /-100+ \----- Carubv10012599m [Capsella rubella] (67) | | | \--------------------- Bostr.13671s0465.1.p [Boechera stricta] (20) /-100+ | | /----- AT1G10240.1 [Arabidopsis thaliana] (19) | \---------100--------+ | \----- Araha.7305s0002.1.p [Arabidopsis halleri] (36) | | /---------- XP_013585848.1 [Brassica oleracea] (47) | | | |---------- XP_009148348.1 [Brassica rapa] (48) /-100+ /-100+ | | | | /----- RrC2514_p1 [Raphanus raphanistrum] (56) | | | \-100+ | | /-100-+ \----- Rsa1.0_00605.1_g00016.1 [Raphanus sativus] (63) | | | | | | /-100+ \--------------- 676723288 [Sisymbrium irio] (73) /-100+ | | | | | \-100+ \--------------------- Tp1g08850 [Thellungiella parvula] (72) | | | | | \-------------------------- Thhalv10006984m [Eutrema salsugineum] (74) /-100+ | | | \------------------------------------ AA65G00080 [Aethionema arabicum] (37) | | /-100-+ \----------------------------------------- XP_010543997.1 [Tarenaya hassleriana] (21) | | | \---------------------------------------------- evm.model.supercontig_113.2 [Carica papaya] (57) /-75-+ | | /----- Eucgr.G00085.1.p [Eucalyptus grandis] (17) | \----------------------100---------------------+ | \----- EcC081225.10 [Eucalyptus camaldulensis] (46) /-75-+ | | /---------- Neem_8611_f_1 [Azadirachta indica] (18) | | | | \----------------------100---------------------+ /----- orange1.1g047253m [Citrus sinensis] (22) | \-100+ --100+ \----- Ciclev10000456m [Citrus clementina] (24) | | /----- Cotton_A_01720_BGI-A2_v1.0 [Gossypium arboreum] (30) | /-100+ | | \----- Gorai.006G118900.1 [Gossypium raimondii] (70) \-------------------------88------------------------+ \---------- Thecc1EG041141t1 [Theobroma cacao] (41) Subtree rooted at node 132: /---------- Csa13g038050.1 [Camelina sativa] (3) | /-100+ /----- Csa20g057530.1 [Camelina sativa] (38) | \-97-+ | \----- Csa08g029960.1 [Camelina sativa] (45) /-100-+ | | /----- Carubv10000250m [Capsella rubella] (34) | \---100---+ /-94-+ \----- Cagra.13833s0001.1.p [Capsella grandiflora] (66) | | | | /----- Araha.14240s0001.1.p [Arabidopsis halleri] (7) /---100---+ \------100------+ | | \----- AT5G28530.1 [Arabidopsis thaliana] (12) | | | \-------------------------- Bostr.29827s0002.1.p [Boechera stricta] (60) | | /------------------------------- KFK28408.1 [Arabis alpina] (9) /-100+ | | | | /----- XP_013621323.1 [Brassica oleracea] (13) | | | /-100+ | | | | \----- XP_009129834.1 [Brassica rapa] (59) | | | /-100+ | \-96-+ | \---------- Rsa1.0_02096.1_g00005.1 [Raphanus sativus] (64) | | /-100-+ /-100+ | | \--------------- 676781928 [Sisymbrium irio] (43) | | | /-95-+ | | | | \--------------------- Tp2g20160 [Thellungiella parvula] (27) | | \-100+ /-100-+ | \-------------------------- Thhalv10003748m [Eutrema salsugineum] (33) | | | | | \----------------------------------------- AA65G00101 [Aethionema arabicum] (5) /-100+ | | | \---------------------------------------------- XP_010547203.1 [Tarenaya hassleriana] (31) | | | \---------------------------------------------------- Eucgr.H00883.1.p [Eucalyptus grandis] (40) /-100+ | | /----- Neem_2595_f_6 [Azadirachta indica] (42) | | /-100+ | | | \----- Neem_3991_f_2 [Azadirachta indica] (50) | \----------------------100---------------------+ | | /----- Ciclev10014479m [Citrus clementina] (52) --100+ \-100+ | \----- orange1.1g005579m [Citrus sinensis] (55) | | /---------- Thecc1EG020251t1 [Theobroma cacao] (35) | | \------------------------100------------------------+ /----- Cotton_A_30905_BGI-A2_v1.0 [Gossypium arboreum] (54) \-100+ \----- Gorai.005G129200.1 [Gossypium raimondii] (69) Root part of tree: /------------------------------------------------------------------- Eucgr.L00168.1.p [Eucalyptus grandis] (1) | |------------------------------------------------------------------- Eucgr.D01455.1.p [Eucalyptus grandis] (49) | | /------------------------------------- (97) | | | | /------ orange1.1g004420m [Citrus sinensis] (4) | | /-100-+ | | | \------ Ciclev10004395m [Citrus clementina] (6) | | /----100----+ | | | \------------ Neem_586_f_4 [Azadirachta indica] (14) | /-100-+ | | | | | /------ Gorai.011G195800.1 [Gossypium raimondii] (26) | | | /-100-+ /-100-+ | | | | | | \------ Cotton_A_19865_BGI-A2_v1.0 [Gossypium arboreum] (58) | | | | | /-100-+ | | | | | | \------------ Thecc1EG021310t3 [Theobroma cacao] (62) | | | | \--79-+ | | \--100-+ \------------------ XP_010524725.1 [Tarenaya hassleriana] (68) | | | | /-100-+ | /------ Neem_1766_f_2 [Azadirachta indica] (8) + | | | /--99-+ | | | | | \------ evm.model.supercontig_151.57 [Carica papaya] (44) | | | \-------100-------+ | | | | /------ Eucgr.K03522.1.p [Eucalyptus grandis] (29) | | | \-100-+ | | | \------ EcC066213.10 [Eucalyptus camaldulensis] (39) | /--55-+ | | | | \------------------------------------------- (132) | | | | | | /------ Neem_41287_f_2 [Azadirachta indica] (10) | | | /-100-+ | | | | \------ Neem_10098_f_2 [Azadirachta indica] (25) | | \-----------------100----------------+ | /-100-+ | /------ Ciclev10014474m [Citrus clementina] (16) | | | \-100-+ | | | \------ orange1.1g005549m [Citrus sinensis] (28) | | | | | | /------------------ Thecc1EG030416t1 [Theobroma cacao] (11) | | | | | | \-----------------100----------------+ /------------ Gorai.010G189600.1 [Gossypium raimondii] (15) \-100-+ | | | \-100-+ /------ Cotton_A_18282_BGI-A2_v1.0 [Gossypium arboreum] (53) | \--54-+ | \------ Gh_Sca040411G01 [Gossypium hirsutum] (61) | | /------ Eucgr.D01451.1.p [Eucalyptus grandis] (23) \--------------------------100-------------------------+ \------ EcC054762.100 [Eucalyptus camaldulensis] (32) |