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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1682
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 140: /----- Gorai.001G190000.1 [Gossypium raimondii] (2) /-100+ | \----- Gh_D07G1645 [Gossypium hirsutum] (9) /-100+ | | /----- Cotton_A_36596_BGI-A2_v1.0 [Gossypium arboreum] (5) | \-79-+ | \----- Gh_A07G1493 [Gossypium hirsutum] (13) /--78-+ | | /----- Gh_A08G0451 [Gossypium hirsutum] (29) | | /-99-+ | | | \----- Cotton_A_03265_BGI-A2_v1.0 [Gossypium arboreum] (48) | \-100+ | \---------- Gorai.004G061000.1 [Gossypium raimondii] (38) | | /----- Gh_A07G1753 [Gossypium hirsutum] (8) | /-100+ | | \----- Cotton_A_31698_BGI-A2_v1.0 [Gossypium arboreum] (62) |----100---+ /-100+ | /----- Gorai.001G223800.1 [Gossypium raimondii] (53) | | \-59-+ | | \----- Gh_D07G1957 [Gossypium hirsutum] (80) | | | | /----- Gorai.001G099700.1 [Gossypium raimondii] (14) | | /-63-+ | | | \----- Gh_D07G0867 [Gossypium hirsutum] (73) | | /-100+ | | | | /----- Gh_A07G0806 [Gossypium hirsutum] (32) | | | \-80-+ /-100+ | | \----- Cotton_A_26963_BGI-A2_v1.0 [Gossypium arboreum] (52) | | \--78-+ | | | /----- Cotton_A_03720_BGI-A2_v1.0 [Gossypium arboreum] (20) | | | /-100+ | | | | \----- Gh_A11G1370 [Gossypium hirsutum] (21) | | \-100+ | | | /----- Gorai.007G164600.1 [Gossypium raimondii] (41) | | \-100+ /-100+ | \----- Gh_D11G1518 [Gossypium hirsutum] (44) | | | | | \-------------------------- Thecc1EG002458t1 [Theobroma cacao] (86) | | | | /--------------- evm.model.supercontig_136.56 [Carica papaya] (6) | | | | | | /----- orange1.1g014662m [Citrus sinensis] (22) | \------100------+ /-100+ /-98-+ | | \----- Ciclev10015362m [Citrus clementina] (55) | | \-100+ | | \---------- Neem_1178_f_2 [Azadirachta indica] (63) | | | | /----- EcC054606.10 [Eucalyptus camaldulensis] (43) | | /-100+ /-100+ | | \----- EcC007140.10 [Eucalyptus camaldulensis] (71) | | \-----------100-----------+ | | \---------- Eucgr.A01371.1.p [Eucalyptus grandis] (83) | | | | /----- Eucgr.K01387.1.p [Eucalyptus grandis] (28) /-100-+ \----------------100----------------+ | | \----- EcC027602.10 [Eucalyptus camaldulensis] (56) | | | | /----- XP_010532949.1 [Tarenaya hassleriana] (15) | \-------------------100------------------+ /-100+ \----- XP_010542039.1 [Tarenaya hassleriana] (46) | | | | /----- XP_010548797.1 [Tarenaya hassleriana] (24) | | /-57-+ | | | \----- XP_010551970.1 [Tarenaya hassleriana] (27) | \-------------------100-------------------+ | \---------- XP_010524630.1 [Tarenaya hassleriana] (77) | | /---------- AT5G48250.1 [Arabidopsis thaliana] (10) | | | /------100------+ /----- Araha.23705s0002.1.p [Arabidopsis halleri] (23) | | \-100+ | | \----- 917718 [Arabidopsis lyrata] (57) | | | /---100---+ /--------------------- Bostr.13083s0065.1.p [Boechera stricta] (12) | | | | /-100+ | | | /----- Cagra.14026s0004.1.p [Capsella grandiflora] (33) | | | \-100+ /---100---+ | | | | | \----- Carubv10028191m [Capsella rubella] (51) | | | | | | | | \-100-+ /----- Csa11g074380.1 [Camelina sativa] (36) | | | | /-99-+ | | | | | \----- Csa18g014330.1 [Camelina sativa] (84) | | | \-100+ | | | \---------- Csa20g041160.1 [Camelina sativa] (50) | | | | | | /----- Rsa1.0_00923.1_g00011.1 [Raphanus sativus] (17) | | | /---100---+ | | | | \----- RrC586_p4 [Raphanus raphanistrum] (66) | | | | | | | /-100-+ /----- XP_009151626.1 [Brassica rapa] (25) | | | | | /-100+ | \---------100--------+ | | | \----- GSBRNA2T00144438001 [Brassica napus] (49) | | | \-100+ | | /-100+ | /----- XP_013598992.1 [Brassica oleracea] (35) | | | | \-100+ --100+ | | | \----- GSBRNA2T00142985001 [Brassica napus] (76) | | | | | | | \--------------------- 676782242 [Sisymbrium irio] (47) | | | | | | /----- Rsa1.0_06258.1_g00004.1 [Raphanus sativus] (26) | | | /-100+ | | | | \----- RrC15479_p1 [Raphanus raphanistrum] (64) | | /-84-+ | | | | | | /----- GSBRNA2T00091645001 [Brassica napus] (30) | | | |------100------+-100+ | | | | | \----- XP_009129717.1 [Brassica rapa] (54) | | | | | | | | | | /----- GSBRNA2T00120696001 [Brassica napus] (61) | \-100+ | \-100+ | | | \----- XP_013616451.1 [Brassica oleracea] (81) | | | | | \-------------------------- Tp2g18620 [Thellungiella parvula] (45) | | | \------------------------------- Thhalv10004422m [Eutrema salsugineum] (58) | \-------------------------------------------------------------- AA29G00151 [Aethionema arabicum] (34) Root part of tree: /------------------------------------------------------------------- XP_013622989.1 [Brassica oleracea] (1) | |------------------------------------------------------------------- GSBRNA2T00125199001 [Brassica napus] (68) | | /------------------------------- (140) | | | | /----- Cagra.0133s0112.1.p [Capsella grandiflora] (3) | | /---100---+ | | | \----- Carubv10013971m [Capsella rubella] (59) | | | | | /--99-+ /----- Csa01g008710.1 [Camelina sativa] (19) | /-100+ | | /-86-+ | | | | | | \----- Csa15g009400.1 [Camelina sativa] (74) | | | /-91-+ \-100+ | | | | | \---------- Csa19g011430.1 [Camelina sativa] (85) | | | | | | | | | \--------------------- Bostr.22252s0262.1.p [Boechera stricta] (75) | | \-100+ | /-97-+ | /----- 478095 [Arabidopsis lyrata] (4) | | | | /-100+ | | | | | \----- Araha.4706s0012.1.p [Arabidopsis halleri] (40) | | | \------100------+ | /-97-+ | \---------- AT3G07650.1 [Arabidopsis thaliana] (79) | | | | | | | \------------------------------------ Thhalv10020965m [Eutrema salsugineum] (60) + | | | | \----------------------------------------- Tp3g06590 [Thellungiella parvula] (37) | | | | /----- Rsa1.0_00105.1_g00017.1 [Raphanus sativus] (16) | /-100-+ /---100---+ | | | | \----- RrC508_p5 [Raphanus raphanistrum] (39) | | | | | | | /-100-+ /----- GSBRNA2T00038967001 [Brassica napus] (65) | | | | | /-100+ | | | | | | \----- XP_013586533.1 [Brassica oleracea] (69) | | | | \-86-+ | | \-----------100----------+ | /----- GSBRNA2T00059507001 [Brassica napus] (70) | | | \-100+ | /-100+ | \----- XP_009147047.1 [Brassica rapa] (72) | | | | | | | \--------------------- 676728644 [Sisymbrium irio] (31) | | | | | | /---------- XP_013619988.1 [Brassica oleracea] (18) | | | | | /-100+ | /-100+ /----- XP_009124232.1 [Brassica rapa] (67) | | | | | \-98-+ | | | \-----------------100----------------+ \----- GSBRNA2T00018514001 [Brassica napus] (78) | | | | | | | \--------------- Rsa1.0_00196.1_g00015.1 [Raphanus sativus] (82) \-100+ | | \--------------------------------------------------------- Rsa1.0_00394.1_g00021.1 [Raphanus sativus] (7) | | /----- XP_009134989.1 [Brassica rapa] (11) \---------------------------100--------------------------+ \----- GSBRNA2T00111777001 [Brassica napus] (42) |