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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1667
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 137: /---------- XP_013619277.1 [Brassica oleracea] (2) | /-100+ /----- XP_009123357.1 [Brassica rapa] (5) | \-100+ | \----- GSBRNA2T00013972001 [Brassica napus] (48) /--79-+ | | /----- Rsa1.0_01097.1_g00008.1 [Raphanus sativus] (57) | \---100---+ | \----- RrC641_p4 [Raphanus raphanistrum] (84) | /-67-+ /----- RrC14395_p2 [Raphanus raphanistrum] (22) | | /---100---+ | | | \----- Rsa1.0_00923.1_g00018.1 [Raphanus sativus] (67) | | | | \-100-+ /----- XP_013627192.1 [Brassica oleracea] (60) | | /-100+ | | | \----- GSBRNA2T00125127001 [Brassica napus] (85) | \-100+ | \---------- XP_009135055.1 [Brassica rapa] (79) | | /----- GSBRNA2T00073268001 [Brassica napus] (27) /-67-+ /-100+ | | | \----- XP_013638377.1 [Brassica oleracea] (75) | | /-100+ | | | | /----- GSBRNA2T00080677001 [Brassica napus] (43) | | | \-100+ | |----100---+ \----- XP_009146933.1 [Brassica rapa] (49) | | | /-68-+ | | /----- Rsa1.0_00363.1_g00017.1 [Raphanus sativus] (35) | | | \---100---+ | | | \----- RrC2737_p4 [Raphanus raphanistrum] (70) | | | /-68-+ | \-------------------------- 676765056 [Sisymbrium irio] (51) | | | | | \------------------------------- Tp3g07750 [Thellungiella parvula] (83) | | | \------------------------------------ Thhalv10020579m [Eutrema salsugineum] (77) | | /----- Araha.4860s0013.1.p [Arabidopsis halleri] (4) /---------68---------+ /---------100--------+ | | | \----- AT3G09370.2 [Arabidopsis thaliana] (33) | | | | | | /----- Csa01g010090.1 [Camelina sativa] (18) | | | /-99-+ | | | | \----- Csa15g010730.1 [Camelina sativa] (65) | \------100-----+ /-100+ | | | \---------- Csa19g012840.1 [Camelina sativa] (38) | | /-100-+ | | | | /----- Cagra.2515s0028.1.p [Capsella grandiflora] (52) | | | \---100---+ | \-100+ \----- Carubv10013377m [Capsella rubella] (62) | | | \--------------------- Bostr.22252s0130.1.p [Boechera stricta] (42) | | /----- Gh_Sca004939G02 [Gossypium hirsutum] (3) | /-66-+ | | \----- Cotton_A_03397_BGI-A2_v1.0 [Gossypium arboreum] (56) | /-100+ | | | /----- Gh_D12G1052 [Gossypium hirsutum] (25) | | \-99-+ | /-100-+ \----- Gorai.008G117400.1 [Gossypium raimondii] (36) | | | | | \--------------- Thecc1EG005402t1 [Theobroma cacao] (13) | | | /----------------100----------------+ /--------------- evm.model.supercontig_18.208 [Carica papaya] (14) | | | | | | | | /----- Neem_27542_f_3 [Azadirachta indica] (45) | | \--90-+ /-100+ | | | | \----- Neem_9891_f_9 [Azadirachta indica] (69) | | \-84-+ | | \---------- EcC054026.10 [Eucalyptus camaldulensis] (63) | | | | /--------------------- Carubv10002477m [Capsella rubella] (6) --75-+ | | | | | /---------- Csa13g056870.1 [Camelina sativa] (8) | | /-100+ | | | | | /-97-+ /----- Csa16g023230.1 [Camelina sativa] (24) | | | | | \-70-+ | | | \-100-+ \----- Csa02g001590.1 [Camelina sativa] (78) | | /-94-+ | | | | | \--------------- Csa08g001640.1 [Camelina sativa] (73) | | | | | | | \-------------------------- Bostr.10064s0051.1.p [Boechera stricta] (20) |-100+ /-100+ | | | | /----- 490512 [Arabidopsis lyrata] (16) | | | | /-100+ | | | | | \----- Araha.7109s0021.1.p [Arabidopsis halleri] (80) | | /-100+ \---------100--------+ | | | | \---------- AT4G00540.1 [Arabidopsis thaliana] (59) | | | | | | | \------------------------------------ KFK30632.1 [Arabis alpina] (10) | | | | | /-100+ /----- GSBRNA2T00012052001 [Brassica napus] (21) | | | | /-100+ | | | | | \----- XP_009128489.1 [Brassica rapa] (31) | | | | /-86-+ | | | | | \---------- GSBRNA2T00113286001 [Brassica napus] (28) | | /--99-+ \-----------100-----------+ | | | | | /----- GSBRNA2T00012053001 [Brassica napus] (30) | | | | \---100---+ | | | | \----- XP_009128621.1 [Brassica rapa] (74) | \-100+ | | | \---------------------------------------------- 676743408 [Sisymbrium irio] (26) | | | \---------------------------------------------------- Thhalv10029464m [Eutrema salsugineum] (82) | \-------------------------------------------------------------- AA93G00103 [Aethionema arabicum] (72) Root part of tree: /------------------------------------------------------------------- Gh_A09G1458 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Cotton_A_12042_BGI-A2_v1.0 [Gossypium arboreum] (7) | | /------------------------------------ (137) | | | | /----- 324904 [Arabidopsis lyrata] (11) | | /-100+ | | | \----- Araha.21080s0002.1.p [Arabidopsis halleri] (86) | | /-------98------+ | | | \---------- AT5G02320.1 [Arabidopsis thaliana] (17) | | | | | | /----- Csa13g002170.1 [Camelina sativa] (44) | | | /-100+ | /-75-+ | | \----- Csa08g062350.1 [Camelina sativa] (76) | | | /-100+ /-100+ | | | | | | \---------- Csa20g002380.1 [Camelina sativa] (66) | | | | | /-100-+ | | | | | | | /----- Carubv10000643m [Capsella rubella] (46) | | | | | | \---100---+ | | | | \-100+ \----- Cagra.0487s0012.1.p [Capsella grandiflora] (50) | | | | | | | | | \--------------------- Bostr.6251s0040.1.p [Boechera stricta] (47) | | | | | | \-100+ /----- XP_009122788.1 [Brassica rapa] (12) | | | /-100+ | /-100+ | | \----- GSBRNA2T00069535001 [Brassica napus] (32) | | | | /-100+ | | | | | | /----- GSBRNA2T00032377001 [Brassica napus] (15) + | | | | \-100+ | | | | /-100-+ \----- XP_013607324.1 [Brassica oleracea] (58) | | | | | | | | | \----95---+ \--------------- 676717716 [Sisymbrium irio] (34) | | | | | | | \--------------------- Thhalv10013211m [Eutrema salsugineum] (64) | /--74-+ | | | | | /---------- XP_010558324.1 [Tarenaya hassleriana] (19) | | | | | | | | \--------------100-------------+ /----- XP_010553045.1 [Tarenaya hassleriana] (23) | | | \-51-+ | | | \----- XP_010543303.1 [Tarenaya hassleriana] (40) | | | | /-100+ | /----- evm.model.supercontig_228.17 [Carica papaya] (37) | | | \-------------------100------------------+ | | | \----- Eucgr.K03133.1.p [Eucalyptus grandis] (55) | | | | | | /----- Neem_30914_f_1 [Azadirachta indica] (9) | | | /-100+ | | | | \----- Neem_11095_f_2 [Azadirachta indica] (81) | | \-------------------100-------------------+ | | | /----- orange1.1g009391m [Citrus sinensis] (41) | /-100+ \-100+ | | | \----- Ciclev10011446m [Citrus clementina] (61) | | | | | | /----- Gh_D13G1009 [Gossypium hirsutum] (29) | | | /-100+ | | | | \----- Gorai.001G249400.1 [Gossypium raimondii] (87) | | | /-100+ \-100+ | | | /----- Cotton_A_41147_BGI-A2_v1.0 [Gossypium arboreum] (53) | | | \-100+ | \--------------------96-------------------+ \----- Gh_A13G0754 [Gossypium hirsutum] (54) | | | \--------------- Thecc1EG021936t1 [Theobroma cacao] (71) | | /----- Gorai.006G172800.1 [Gossypium raimondii] (39) \---------------------------100--------------------------+ \----- Gh_D09G1467 [Gossypium hirsutum] (68) |