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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1611
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 131: /----- Tp6g02500 [Thellungiella parvula] (2) /-----------------98----------------+ | \----- Thhalv10028821m [Eutrema salsugineum] (79) | | /------------------------------------ 676732794 [Sisymbrium irio] (4) | | | | /---------- GSBRNA2T00018443001 [Brassica napus] (6) | | | /-69-+ | | /----- GSBRNA2T00018220001 [Brassica napus] (47) | | | /-99-+-100+ | | | | | \----- XP_013612197.1 [Brassica oleracea] (86) | | | | | | | | /----98----+ \---------- XP_009111272.1 [Brassica rapa] (76) | | | | | | | | | | /----- Rsa1.0_00132.1_g00023.1 [Raphanus sativus] (40) | \-93-+ | \---100---+ | | | \----- RrC16674_p2 [Raphanus raphanistrum] (55) | | | | | /-95-+ /--------------- XP_009134422.1 [Brassica rapa] (20) | | | | | | | | | | /----- XP_013614535.1 [Brassica oleracea] (65) | | | | /-100-+ /-100+ | | | | | | | \----- GSBRNA2T00002398001 [Brassica napus] (71) | | | | | \-92-+ | | | \-100+ \---------- GSBRNA2T00151670001 [Brassica napus] (77) | | | | | \-56-+ | /----- RrC1223_p2 [Raphanus raphanistrum] (43) | | \------100------+ /--93-+ | \----- Rsa1.0_02362.1_g00004.1 [Raphanus sativus] (72) | | | | | | /----- XP_009144630.1 [Brassica rapa] (28) | | | /-100+ | | | | \----- GSBRNA2T00104317001 [Brassica napus] (42) | | \---------100--------+ | | | /----- GSBRNA2T00152541001 [Brassica napus] (53) | | \-100+ | | \----- XP_013615939.1 [Brassica oleracea] (82) | | | | /--------------- Bostr.2983s0202.1.p [Boechera stricta] (5) | | | | | | /----- Csa08g051850.1 [Camelina sativa] (11) | | | /-100+ /-93-+ | /--70-+ | \----- Csa02g005850.1 [Camelina sativa] (75) | | | | | | | | | | | | /----- Carubv10001523m [Capsella rubella] (31) | | | | \-100+-97-+ | | | | | \----- Cagra.0635s0023.1.p [Capsella grandiflora] (70) | | | | | | | \-----------100----------+ \---------- Csa13g054580.1 [Camelina sativa] (45) | | | | | |--------------------- Araha.9182s0005.1.p [Arabidopsis halleri] (18) | | | | | | /----- 490301 [Arabidopsis lyrata] (56) | | \-------76------+ | | \----- AT4G02590.1 [Arabidopsis thaliana] (73) | | /-96-+ \---------------------------------------------------- AA32G00287 [Aethionema arabicum] (17) | | | | /------------------------------------ AA7G00048 [Aethionema arabicum] (8) | | | | | | /----- RrC37_p11 [Raphanus raphanistrum] (12) | | | /----87---+ | | | | \----- Rsa1.0_00336.1_g00035.1 [Raphanus sativus] (49) | | | | | | | /-100-+ /----- XP_009119583.1 [Brassica rapa] (36) | | | | | /-95-+ | | | | | | \----- GSBRNA2T00150402001 [Brassica napus] (39) | | | | \-59-+ | | | /----56---+ | /----- GSBRNA2T00002665001 [Brassica napus] (58) | | | | | \-88-+ | \---------100--------+ | | \----- XP_013587292.1 [Brassica oleracea] (64) | | | | | | | \--------------------- KFK42664.1 [Arabis alpina] (32) | | | | | | /----- Csa14g003150.1 [Camelina sativa] (14) | | | /-68-+ | | | | \----- Csa03g003100.1 [Camelina sativa] (78) --96-+ | | /-100+ | | | | \---------- Csa17g004030.1 [Camelina sativa] (16) | | | /-100-+ | | | | | /----- Carubv10009831m [Capsella rubella] (21) | \-95-+ | \---100---+ | | | \----- Cagra.0897s0074.1.p [Capsella grandiflora] (22) | | /-100+ | | | | /----- 470281 [Arabidopsis lyrata] (23) | | | | /-70-+ | | | | | \----- Araha.39200s0006.1.p [Arabidopsis halleri] (88) | |-50-+ \----100---+ | | | \---------- AT1G03040.1 [Arabidopsis thaliana] (63) | | | | | \-------------------------- Thhalv10008279m [Eutrema salsugineum] (59) | | | |------------------------------- Tp1g02030 [Thellungiella parvula] (67) | | | \------------------------------- 676750598 [Sisymbrium irio] (81) | | /----- XP_010522761.1 [Tarenaya hassleriana] (44) \---------------------------100--------------------------+ \----- XP_010556765.1 [Tarenaya hassleriana] (68) Root part of tree: /------------------------------------------------------------------- Cotton_A_09305_BGI-A2_v1.0 [Gossypium arboreum] (1) | |------------------------------------------------------------------- Gh_D11G2556 [Gossypium hirsutum] (7) | |------------------------------------------------------------------- Gorai.007G277200.1 [Gossypium raimondii] (85) | | /--------------------------------- (131) | | | | /------ Ciclev10021443m [Citrus clementina] (3) | | /-100+ | | | \------ orange1.1g022649m [Citrus sinensis] (13) | | /-100-+ | | | \----------- Neem_2420_f_2 [Azadirachta indica] (10) | | /----66----+ | | | \----------------- Eucgr.B01487.1.p [Eucalyptus grandis] (35) | | | | | | /------ Gh_A08G1678 [Gossypium hirsutum] (9) | | | /-100+ | | | | \------ Cotton_A_20686_BGI-A2_v1.0 [Gossypium arboreum] (51) | /-100-+ | /-100-+ | | | | | | /------ Gh_D08G2028 [Gossypium hirsutum] (26) | | | | | \-99-+ | | | | | \------ Gorai.004G218900.1 [Gossypium raimondii] (33) | | | | /-91-+ | | | | | | /------ Gh_A08G2484 [Gossypium hirsutum] (24) | | | | | | /-100+ | | | | | | | \------ Cotton_A_26005_BGI-A2_v1.0 [Gossypium arboreum] (83) | | | | | \-100-+ | | | | | | /------ Gh_D08G0666 [Gossypium hirsutum] (27) | | | | | \-95-+ | | | | | \------ Gorai.004G075200.1 [Gossypium raimondii] (61) | | | | | | | \-68-+ | /------ Gh_D11G1319 [Gossypium hirsutum] (29) | | | | /-100+ | | | | | \------ Gorai.007G141800.1 [Gossypium raimondii] (38) | | | |----100---+ + | |-100-+ | /------ Cotton_A_26571_BGI-A2_v1.0 [Gossypium arboreum] (34) | | | | \-85-+ | | | | \------ Gh_A11G1163 [Gossypium hirsutum] (46) | /--56-+ | | | | | | | /------ Cotton_A_05966_BGI-A2_v1.0 [Gossypium arboreum] (30) | | | | | /-100+ | | | | | | \------ Gh_A07G2157 [Gossypium hirsutum] (41) | | | | |----100---+ | | | | | | /------ Gorai.001G242500.1 [Gossypium raimondii] (57) | | | | | \-100+ | | | | | \------ Gh_D07G2121 [Gossypium hirsutum] (60) | | | | | | | | | \---------------------- Thecc1EG004217t1 [Theobroma cacao] (74) | | | | | | | \---------------------------- evm.model.supercontig_52.97 [Carica papaya] (62) | | | | /-84-+ | /------ Ciclev10001768m [Citrus clementina] (25) | | | | /-100+ | | | | | \------ orange1.1g040019m [Citrus sinensis] (69) | | | |-------------78------------+ | | | | \----------- Neem_6855_f_10 [Azadirachta indica] (52) | | | | | | | | /------ Neem_29679_a_1 [Azadirachta indica] (50) | | | \---------------64---------------+ | | | \------ Araha.5618s0017.1.p [Arabidopsis halleri] (66) | | | | /-100-+ | /----------- Eucgr.H04337.1.p [Eucalyptus grandis] (15) | | | | | | | | \---------------100---------------+ /------ EcC009296.10 [Eucalyptus camaldulensis] (54) | | | \-96-+ | | | \------ EcC041921.20 [Eucalyptus camaldulensis] (80) | | | | /-100+ | /------ XP_010553329.1 [Tarenaya hassleriana] (37) | | | | /-99-+ | | | | | \------ XP_010553759.1 [Tarenaya hassleriana] (84) | | | \------------------89------------------+ \--93-+ | \----------- evm.model.supercontig_117.94 [Carica papaya] (48) | | | \-------------------------------------------------------- Thecc1EG026346t1 [Theobroma cacao] (87) | \------------------------------------------------------------- Gh_A11G2243 [Gossypium hirsutum] (19) |