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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1606
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 153: /----- Rsa1.0_01376.1_g00010.1 [Raphanus sativus] (4) /------100------+ | \----- RrC4620_p2 [Raphanus raphanistrum] (24) | | /----- XP_013610850.1 [Brassica oleracea] (7) | /-100+ /--------100--------+ | \----- GSBRNA2T00033513001 [Brassica napus] (51) | | /-100+ | | | | /----- XP_009114291.1 [Brassica rapa] (15) | | | \-100+ | \-100-+ \----- XP_009114293.1 [Brassica rapa] (38) | | | \--------------- GSBRNA2T00076663001 [Brassica napus] (37) | | /----- XP_009101446.1 [Brassica rapa] (6) | /-100+ | | \----- GSBRNA2T00054768001 [Brassica napus] (16) | /-100+ /-100+ | | /----- XP_013593756.1 [Brassica oleracea] (70) | | | \-100+ | | /---------100--------+ \----- GSBRNA2T00128764001 [Brassica napus] (81) | | | | | | | | /----- Rsa1.0_00382.1_g00027.1 [Raphanus sativus] (10) | | | \---100---+ | | | \----- RrC12599_p1 [Raphanus raphanistrum] (54) | | | | | | /---------- GSBRNA2T00069896001 [Brassica napus] (26) | | | | | | | /-80-+ /----- XP_013612520.1 [Brassica oleracea] (44) | \-95-+ | \-100+ /-100-+ | /--80-+ \----- GSBRNA2T00097923001 [Brassica napus] (76) | | | | | | | | /-100+ \--------------- GSBRNA2T00041687001 [Brassica napus] (33) | | | | | | | | | \--------------------- XP_009128943.1 [Brassica rapa] (66) | | | /-100+ | | | | | /----- Rsa1.0_02041.1_g00003.1 [Raphanus sativus] (53) /-100+ | | | \---------100--------+ | | | \-99-+ \----- RrC9887_p2 [Raphanus raphanistrum] (55) | | | | | | | \------------------------------- 676774550 [Sisymbrium irio] (78) | | | | | \---------------------------------------------- Tp2g11950 [Thellungiella parvula] (27) | | | \---------------------------------------------------- Thhalv10000871m [Eutrema salsugineum] (25) | | /----- Cagra.3675s0017.1.p [Capsella grandiflora] (23) /-100+ /---100---+ | | | \----- Carubv10026597m [Capsella rubella] (30) | | | | | /-100-+ /----- Csa11g064680.1 [Camelina sativa] (52) | | | | /-100+ | | | | | \----- Csa18g002730.1 [Camelina sativa] (68) | | /-85-+ \-100+ | | | | \---------- Csa20g081520.1 [Camelina sativa] (73) | | | | | | | \--------------------- Bostr.28243s0001.1.p [Boechera stricta] (67) | \--------------100-------------+ | | /----- Araha.7205s0002.1.p [Arabidopsis halleri] (46) | | /-100+ | | | \----- 356279 [Arabidopsis lyrata] (65) | \------100------+ | \---------- AT5G47140.1 [Arabidopsis thaliana] (79) | | /----- Rsa1.0_00220.1_g00017.1 [Raphanus sativus] (5) | /---100---+ | | \----- RrC18592_p1 [Raphanus raphanistrum] (40) | | | /----100---+ /---------- XP_009108336.1 [Brassica rapa] (20) | | | | | | \-100+ /----- XP_013605663.1 [Brassica oleracea] (34) | | \-99-+ | | \----- GSBRNA2T00010972001 [Brassica napus] (36) | /-93-+ | | | /--------------------- 676728394 [Sisymbrium irio] (28) --100+ | | | | | | | /----- XP_013615880.1 [Brassica oleracea] (31) | | | | /-100+ | | \-99-+ | \----- GSBRNA2T00067662001 [Brassica napus] (59) | | | /-100+ | | | | | /----- GSBRNA2T00131243001 [Brassica napus] (47) | /-100+ | | \-99-+ | | | \-100-+ \----- XP_009130771.1 [Brassica rapa] (48) | | | | | | | | /----- RrC1846_p1 [Raphanus raphanistrum] (41) | | | \---100---+ | /-100+ | \----- Rsa1.0_00326.1_g00012.1 [Raphanus sativus] (43) | | | | | | | \------------------------------- Tp7g16590 [Thellungiella parvula] (21) | | | | | \------------------------------------ Thhalv10024940m [Eutrema salsugineum] (75) | | | | /---------- AT4G17570.2 [Arabidopsis thaliana] (12) | /-100+ | | | | /------100------+ /----- 493120 [Arabidopsis lyrata] (56) | | | | \-100+ | | | | \----- Araha.4507s0007.1.p [Arabidopsis halleri] (71) | | | | | | | | /----- Carubv10007115m [Capsella rubella] (17) | | | | /---100---+ | | \------100-----+ | \----- Cagra.3356s0048.1.p [Capsella grandiflora] (63) | | | | \------100------+ | /--59-+ /---------- Csa11g031090.1 [Camelina sativa] (19) | | | | | | | | \-100+ /----- Csa12g047050.1 [Camelina sativa] (62) | \-100+ \-99-+ | | \----- Csa10g027810.1 [Camelina sativa] (77) | | | \--------------------- Bostr.30275s0218.1.p [Boechera stricta] (60) | \---------------------------------------------- AA57G00030 [Aethionema arabicum] (45) Root part of tree: /------------------------------------------------------------------- Gh_D09G1872 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Gorai.006G214400.1 [Gossypium raimondii] (29) | | /------- Gh_A12G1945 [Gossypium hirsutum] (2) | /--100--+ | | \------- Cotton_A_07168_BGI-A2_v1.0 [Gossypium arboreum] (64) | /------100-----+ | | | /------- Gh_D12G2125 [Gossypium hirsutum] (11) | | \---94--+ | | \------- Gorai.008G231500.1 [Gossypium raimondii] (32) | | | | /------- Gorai.004G193200.1 [Gossypium raimondii] (9) | | /--100--+ | | | \------- Gh_D08G1783 [Gossypium hirsutum] (61) | | /--100-+ | | | | /------- Cotton_A_36873_BGI-A2_v1.0 [Gossypium arboreum] (22) | | | \--100--+ | /----------63---------+ | \------- Gh_A08G1484 [Gossypium hirsutum] (35) | | |---58--+ | | | | /------- Gh_A03G0054 [Gossypium hirsutum] (49) | | | | /--100--+ + | | | | \------- Cotton_A_16049_BGI-A2_v1.0 [Gossypium arboreum] (50) | | | \--100-+ | | | | /------- Gh_D03G1602 [Gossypium hirsutum] (58) | | | \--100--+ | | | \------- Gorai.003G177500.1 [Gossypium raimondii] (72) | | | | | \------------------------------ Thecc1EG015870t1 [Theobroma cacao] (42) | | | /--100--+ /------- Ciclev10019607m [Citrus clementina] (3) | | | /--100--+ | | | | \------- orange1.1g009151m [Citrus sinensis] (82) | | | /-------------100-------------+ | | | | | /------- Neem_7758_f_10 [Azadirachta indica] (8) | | | | \---94--+ | | | | \------- Neem_29926_f_1 [Azadirachta indica] (74) | | | | | | | | /---------------------- (153) | | | | | | | | | | /------- XP_010518703.1 [Tarenaya hassleriana] (18) | | \--100-+ /--100--+ /--100--+ | | | | | | \------- XP_010538480.1 [Tarenaya hassleriana] (84) | | | | \--100-+ \--100-+ | /--100-+ \--------------- XP_010529984.1 [Tarenaya hassleriana] (39) | | | | | | | \------------------------------ evm.model.supercontig_74.95 [Carica papaya] (13) | | | | \---98--+ /------- Eucgr.E00364.1.p [Eucalyptus grandis] (14) | | /--100--+ | | | \------- EcC023187.10 [Eucalyptus camaldulensis] (57) | \---------100---------+ | | /------- Eucgr.D02129.1.p [Eucalyptus grandis] (69) | \--100--+ | \------- EcC040945.10 [Eucalyptus camaldulensis] (80) | | /------- Cotton_A_16593_BGI-A2_v1.0 [Gossypium arboreum] (83) \-------------------------100------------------------+ \------- Gh_A09G1763 [Gossypium hirsutum] (85) |