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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1534
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 149: /----- Tp2g14270 [Thellungiella parvula] (2) /-------99------+ | \----- 676750298 [Sisymbrium irio] (84) | | /----- XP_009152200.1 [Brassica rapa] (16) | /-100+ /-74-+ | \----- GSBRNA2T00081590001 [Brassica napus] (88) | | /-100+ | | | | /----- XP_013596079.1 [Brassica oleracea] (57) | | | \-100+ | \-100-+ \----- GSBRNA2T00115304001 [Brassica napus] (76) | | | | /----- RrC1038_p2 [Raphanus raphanistrum] (62) /-100+ \---100---+ | | \----- Rsa1.0_01016.1_g00022.1 [Raphanus sativus] (65) | | | | /----- GSBRNA2T00063487001 [Brassica napus] (25) | | /---100---+ | | | \----- XP_013616172.1 [Brassica oleracea] (33) | | | | \----100---+ /----- XP_009129095.1 [Brassica rapa] (60) /-99-+ | /-100+ | | | | \----- GSBRNA2T00011734001 [Brassica napus] (77) | | \-50-+ | | | /----- RrC21319_p1 [Raphanus raphanistrum] (70) | | \-100+ | | \----- Rsa1.0_02766.1_g00006.1 [Raphanus sativus] (90) | | | \------------------------------- Thhalv10004015m [Eutrema salsugineum] (64) | /-100+ /----- Carubv10017039m [Capsella rubella] (3) | | /---100---+ | | | \----- Cagra.0391s0009.1.p [Capsella grandiflora] (80) | | | | | /-100-+ /---------- Csa09g005670.1 [Camelina sativa] (15) | | | | | | | | \-100+ /----- Csa06g004330.1 [Camelina sativa] (20) | | | \-100+ | | | \----- Csa04g008890.1 [Camelina sativa] (45) /---------100--------+ \------100-----+ | | | /--------------- Bostr.0556s0160.1.p [Boechera stricta] (32) | | | | | | | | /----- 484242 [Arabidopsis lyrata] (35) | | \--93-+ /-100+ | | | | \----- Araha.14782s0006.1.p [Arabidopsis halleri] (87) | | \-100+ | | \---------- AT2G03340.1 [Arabidopsis thaliana] (66) | | | \----------------------------------------- AA53G00752 [Aethionema arabicum] (53) | | /----- XP_010523478.1 [Tarenaya hassleriana] (4) | /-55-+ | | \----- XP_010527942.1 [Tarenaya hassleriana] (85) | /----------------------93----------------------+ | | \---------- XP_010554301.1 [Tarenaya hassleriana] (22) | | | | /----- Cotton_A_18314_BGI-A2_v1.0 [Gossypium arboreum] (5) | | /-100+ | | | \----- Gh_A05G3186 [Gossypium hirsutum] (19) | | /----100---+ --100+ | | | /----- Gh_D04G0418 [Gossypium hirsutum] (7) | | | \-100+ | | | \----- Gorai.012G051500.1 [Gossypium raimondii] (29) | | | | | | /----- Gorai.006G013300.1 [Gossypium raimondii] (9) | | | /-100+ | | /-100+ | \----- Gh_D09G0113 [Gossypium hirsutum] (11) | | | | /-100+ | | | | | | /----- Cotton_A_22072_BGI-A2_v1.0 [Gossypium arboreum] (49) | | | | | \-100+ | | | | | \----- Gh_A09G0118 [Gossypium hirsutum] (92) | | | | | | | | | | /----- Gorai.001G241200.1 [Gossypium raimondii] (50) | | | \--59-+ /-100+ | | /-100+ | | \----- Gh_D07G2107 [Gossypium hirsutum] (58) | | | | |-100+ | | | | | \---------- Gh_A07G1892 [Gossypium hirsutum] (68) | | | | | | | | | \--------------- Thecc1EG018667t1 [Theobroma cacao] (59) | | /-100+ | | | | | | /----- orange1.1g010802m [Citrus sinensis] (6) \-100+ | | \---------100--------+ | | | \----- Neem_435_f_4 [Azadirachta indica] (91) | | | | /-99-+ \------------------------------- Eucgr.I01998.1.p [Eucalyptus grandis] (83) | | | | | | /----- Eucgr.B03189.1.p [Eucalyptus grandis] (14) | | | /-100+ | | | | \----- EcS710815.10 [Eucalyptus camaldulensis] (41) | | \------------88-----------+ | /-98-+ \---------- Eucgr.G02469.1.p [Eucalyptus grandis] (23) | | | | | | /----- Neem_11232_f_2 [Azadirachta indica] (13) | | | /-100+ | | | | \----- Neem_19819_f_1 [Azadirachta indica] (40) | | \--------------100-------------+ | | | /----- Ciclev10031225m [Citrus clementina] (17) | | \-100+ | | \----- orange1.1g009051m [Citrus sinensis] (79) | | | /--98-+ /----- Gh_D04G1896 [Gossypium hirsutum] (27) | | | /-100+ | | | | \----- Gorai.012G186000.1 [Gossypium raimondii] (74) | | | /-100+ | | | | | /----- Gh_A04G1269 [Gossypium hirsutum] (30) | | | | \-100+ | | | /--96-+ \----- Cotton_A_11750_BGI-A2_v1.0 [Gossypium arboreum] (47) | | | | | | | | | \--------------- Thecc1EG011624t1 [Theobroma cacao] (48) \-100+ | | | \-----------100----------+ /----- Cotton_A_26644_BGI-A2_v1.0 [Gossypium arboreum] (34) | | /-100+ | | | \----- Gh_A13G0696 [Gossypium hirsutum] (55) | \----100---+ | | /----- Gh_D13G0820 [Gossypium hirsutum] (38) | \-100+ | \----- Gorai.013G090200.1 [Gossypium raimondii] (56) | \---------------------------------------------------- evm.model.supercontig_1.76 [Carica papaya] (31) Subtree rooted at node 175: /----- (149) /----------------------100---------------------+ | \----- AA14G00003 [Aethionema arabicum] (44) | | /----- GSBRNA2T00090545001 [Brassica napus] (10) | /-100+ | | \----- XP_013604490.1 [Brassica oleracea] (42) | /-100+ | | | /----- XP_009117949.1 [Brassica rapa] (63) | | \-100+ | /------100------+ \----- GSBRNA2T00055208001 [Brassica napus] (89) | | | | | | /----- Rsa1.0_03486.1_g00004.1 [Raphanus sativus] (24) | | \---100---+ | | \----- RrC4028_p2 [Raphanus raphanistrum] (75) | | | | /--------------- XP_013587047.1 [Brassica oleracea] (12) | | | | /-59-+ | /----- GSBRNA2T00105528001 [Brassica napus] (28) | | | /-100-+ /-100+ /-99-+ | | | | | \----- GSBRNA2T00062034001 [Brassica napus] (71) | | | | | \-86-+ | | | | /-99-+ \---------- XP_009148678.1 [Brassica rapa] (72) | | | | | | | | /-56-+ | | | /----- RrC252_p6 [Raphanus raphanistrum] (26) | | | | \-59-+ \------100------+ | | | | | \----- Rsa1.0_00825.1_g00014.1 [Raphanus sativus] (61) | | | | | | | | | \-------------------------- 676759968 [Sisymbrium irio] (43) | | | | | | | \------------------------------------ Tp1g12320 [Thellungiella parvula] (52) | | /-99-+ | | | | /----- XP_013600595.1 [Brassica oleracea] (18) | | | | /-100+ /-99-+ | | | | \----- GSBRNA2T00036069001 [Brassica napus] (81) | | | | | /-100+ | | | | | | | /----- GSBRNA2T00103117001 [Brassica napus] (36) | | | | | | \-100+ | | \--99-+ \-----------100-----------+ \----- XP_009110565.1 [Brassica rapa] (39) | | | | | | | | /----- Rsa1.0_02672.1_g00006.1 [Raphanus sativus] (21) | | | \---100---+ | | | \----- RrC824_p3 [Raphanus raphanistrum] (73) --99-+ | | | | \---------------------------------------------- Thhalv10007428m [Eutrema salsugineum] (54) | | | | /---------- AT1G13960.1 [Arabidopsis thaliana] (37) | | | | \----------------------100---------------------+ /----- 471557 [Arabidopsis lyrata] (46) | \-100+ | \----- 884549 [Arabidopsis lyrata] (51) | \-------------------------------------------------------------- Bostr.13671s0059.1.p [Boechera stricta] (8) Root part of tree: /------------------------------------------------------------------- Carubv10008859m [Capsella rubella] (1) | |------------------------------------------------------------------- Cagra.3501s0106.1.p [Capsella grandiflora] (78) | + /------------------------------------------------------ (175) | | | | /--------------------------- Csa03g017700.1 [Camelina sativa] (67) \-----100----+ | | /-----63-----+ /------------- Csa17g019340.1 [Camelina sativa] (69) | | \------98-----+ \------99-----+ \------------- Csa21393s010.1 [Camelina sativa] (86) | \---------------------------------------- Csa14g016930.1 [Camelina sativa] (82) |