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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1467
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 152: /------------------------------- Thhalv10020174m [Eutrema salsugineum] (3) | | /----- GSBRNA2T00048431001 [Brassica napus] (16) | /-100+ | | \----- XP_009145268.1 [Brassica rapa] (21) | /-100+ | | | /----- XP_013587689.1 [Brassica oleracea] (36) | | \-100+ | /-100-+ \----- GSBRNA2T00014688001 [Brassica napus] (73) | | | /-50-+ | | /----- RrC2359_p2 [Raphanus raphanistrum] (62) | | /-95-+ \---100---+ | | | | \----- Rsa1.0_01910.1_g00002.1 [Raphanus sativus] (68) | | | | | | | \--------------------- 676774398 [Sisymbrium irio] (69) | | | | | | /----- XP_013622497.1 [Brassica oleracea] (43) | | | /-100+ | | | | \----- GSBRNA2T00158450001 [Brassica napus] (74) | \-50-+------100------+ | | | /----- XP_009135824.1 [Brassica rapa] (46) /-50-+ | \-100+ | | | \----- GSBRNA2T00154828001 [Brassica napus] (66) | | | | | | /----- GSBRNA2T00041030001 [Brassica napus] (49) | | | | | | | |----- Rsa1.0_00181.1_g00004.1 [Raphanus sativus] (56) | | \---------50---------+ | | |----- RrC9163_p2 [Raphanus raphanistrum] (78) | | | | | \----- GSBRNA2T00056245001 [Brassica napus] (84) | | | \------------------------------------ KFK39564.1 [Arabis alpina] (28) /-50-+ | | /--------------------- Bostr.19424s0382.1.p [Boechera stricta] (7) | | | | | | /----- Csa19g032010.1 [Camelina sativa] (27) | | | /-100+ | | /-95-+ | \----- Csa01g026040.1 [Camelina sativa] (71) | | | | /-100+ | | | | | \---------- Csa15g040480.1 [Camelina sativa] (35) | | | \--99-+ | | | | /----- Carubv10013101m [Capsella rubella] (33) /--50-+ | | \---100---+ | | \------100-----+ \----- Cagra.1189s0050.1.p [Capsella grandiflora] (38) | | | | | | /----- Araha.1020s0004.1.p [Arabidopsis halleri] (11) | | | /-100+ | | | | \----- 479789 [Arabidopsis lyrata] (12) /-62-+ | \------100------+ | | | \---------- AT3G22780.1 [Arabidopsis thaliana] (13) | | | | | \---------------------------------------------- AA17G00077 [Aethionema arabicum] (22) | | | \---------------------------------------------------- Tp3g20480 [Thellungiella parvula] (65) | | /----- 898758 [Arabidopsis lyrata] (9) | /----98---+ /-51-+ | \----- AT3G22760.1 [Arabidopsis thaliana] (31) | | | | |--------------------72-------------------+ /----- Carubv10015868m [Capsella rubella] (29) | | | /-99-+ | | | | \----- Cagra.1189s0049.1.p [Capsella grandiflora] (53) | | \-74-+ | | \---------- Bostr.19424s0383.1.p [Boechera stricta] (81) | | | \--------------------------------------------------------- KFK39562.1 [Arabis alpina] (54) | | /----- GSBRNA2T00041026001 [Brassica napus] (4) | /-100+ | | \----- XP_013607437.1 [Brassica oleracea] (19) | /-100+ | | | /----- GSBRNA2T00067571001 [Brassica napus] (6) | | \-100+ | /-100-+ \----- XP_009108686.1 [Brassica rapa] (80) | | | --72-+ /----99---+ \--------------- Rsa1.0_00181.1_g00005.1 [Raphanus sativus] (85) | | | | | \--------------------- 676774396 [Sisymbrium irio] (20) | | | | /----- Rsa1.0_01910.1_g00001.1 [Raphanus sativus] (8) | | /---100---+ | | | \----- RrC12859_p1 [Raphanus raphanistrum] (52) | | | | | /-100-+ /----- GSBRNA2T00014689001 [Brassica napus] (40) | | | | /-100+ | /-100+ | | | \----- XP_013584927.1 [Brassica oleracea] (45) | | | | \-100+ | | | | | /----- GSBRNA2T00048430001 [Brassica napus] (58) | | | | \-100+ | | | /-100+ \----- XP_009145269.1 [Brassica rapa] (72) | | | | | | | | | | /----- XP_013627046.1 [Brassica oleracea] (14) | | | | | /-100+ \------------59-----------+ | | | | \----- XP_009135826.1 [Brassica rapa] (15) | \-59-+ \----100---+ | | | /----- RrC644_p8 [Raphanus raphanistrum] (79) | | \-100+ | | \----- Rsa1.0_08312.1_g00002.1 [Raphanus sativus] (86) | | | \-------------------------- Thhalv10020373m [Eutrema salsugineum] (59) | \------------------------------------ Csa15g040470.1 [Camelina sativa] (5) Root part of tree: /------------------------------------------------------------------- XP_010559032.1 [Tarenaya hassleriana] (1) | |------------------------------------------------------------------- XP_010525316.1 [Tarenaya hassleriana] (75) | | /----- Gh_A02G0324 [Gossypium hirsutum] (2) | /-100+ | | \----- Cotton_A_08350_BGI-A2_v1.0 [Gossypium arboreum] (67) | /-100+ | | | /----- Gh_D02G0389 [Gossypium hirsutum] (70) | | \-100+ | /-100-+ \----- Gorai.005G044800.1 [Gossypium raimondii] (90) | | | | | \--------------- Thecc1EG020677t1 [Theobroma cacao] (30) | | | /-82-+ /----- Neem_20032_f_1 [Azadirachta indica] (23) | | | /-100+ | | | | \----- Neem_10634_f_5 [Azadirachta indica] (41) | | \----100---+ | /-51-+ | /----- orange1.1g003968m [Citrus sinensis] (32) | | | \-100+ | | | \----- Ciclev10004441m [Citrus clementina] (76) | | | | /-53-+ \-------------------------- evm.model.supercontig_58.61 [Carica papaya] (89) | | | | | | /---------- Eucgr.H03425.1.p [Eucalyptus grandis] (47) | | | | | | \---------100--------+ /----- EcC047148.10 [Eucalyptus camaldulensis] (61) | | \-100+ | /---------93---------+ \----- Eucgr.B01031.1.p [Eucalyptus grandis] (91) | | | + | | /----- orange1.1g006300m [Citrus sinensis] (24) | | | /-100+ | | | | \----- Ciclev10001376m [Citrus clementina] (26) | | \------------57-----------+ | | \---------- evm.model.supercontig_264.4 [Carica papaya] (39) | | | | /---------------------------------------------------- (152) | | | | | | /----- Csa10g031620.1 [Camelina sativa] (10) | | | | | | | /-100+----- Csa11g037100.1 [Camelina sativa] (44) | /-100+ | | | | | | | | \----- Csa12g056900.1 [Camelina sativa] (82) | | | | /-100+ | | | | | | /----- Cagra.2641s0021.1.p [Capsella grandiflora] (60) | | | | | \-100+ | | | | | \----- Carubv10007448m [Capsella rubella] (77) | | | | /--93-+ | | | | | | /----- Araha.34278s0001.1.p [Arabidopsis halleri] (34) | | | | | | /-100+ | | | | | | | \----- 493420 [Arabidopsis lyrata] (50) | | | | /------100-----+ \-100+ | | | | | | \---------- AT4G14770.1 [Arabidopsis thaliana] (48) | | | | | | | | \-67-+ | \--------------------- Bostr.0597s0095.1.p [Boechera stricta] (57) | | | | | | | | /--------------------- 676713656 [Sisymbrium irio] (17) | | | | | | | | | | /----- GSBRNA2T00075344001 [Brassica napus] (18) | | | | | /-100+ \-100+ | /-100+ /-100+ | \----- XP_013601979.1 [Brassica oleracea] (63) | | | | | | /-99-+ | | | | | | | | /----- XP_009148228.1 [Brassica rapa] (25) | | | | | | | \-100+ | | | | | \-100-+ \----- GSBRNA2T00043627001 [Brassica napus] (64) | | | | /-100+ | | | | | | | | /----- Rsa1.0_00033.1_g00042.1 [Raphanus sativus] (87) | | /-100+ | | | \---100---+ | | | | | | | \----- RrC5380_p1 [Raphanus raphanistrum] (88) | | | | \-100+ | | | | | | \-------------------------- Tp7g12900 [Thellungiella parvula] (83) | | | | | | \-100-+ | \------------------------------- Thhalv10024624m [Eutrema salsugineum] (42) | | | | | \----------------------------------------- KFK43743.1 [Arabis alpina] (37) | | | \---------------------------------------------- AA87G00242 [Aethionema arabicum] (51) | \-------------------------------------------------------------- XP_010532574.1 [Tarenaya hassleriana] (55) |