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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1265
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 162: /------------------------------- Thhalv10007075m [Eutrema salsugineum] (3) | | /-------------------------- Tp1g28280 [Thellungiella parvula] (16) | | | | /----- XP_013605028.1 [Brassica oleracea] (28) | | /-100+ /-100+ | | \----- GSBRNA2T00139997001 [Brassica napus] (56) | | | /-100+ | | | | | /----- Rsa1.0_00815.1_g00003.1 [Raphanus sativus] (42) | | | | \-100+ | | | /--56-+ \----- RrC8230_p1 [Raphanus raphanistrum] (80) | | | | | | \-85-+ | | /----- Rsa1.0_02351.1_g00002.1 [Raphanus sativus] (75) | |-64-+ \---100---+ | | | \----- RrC11277_p1 [Raphanus raphanistrum] (83) | | | | | \--------------------- 676708010 [Sisymbrium irio] (84) | | | | /----- RrC1757_p5 [Raphanus raphanistrum] (46) | | /-100+ | | | \----- Rsa1.0_00043.1_g00007.1 [Raphanus sativus] (71) | \------100------+ /-100+ | /----- XP_009151447.1 [Brassica rapa] (57) | | \-100+ | | \----- XP_013586726.1 [Brassica oleracea] (92) | | | | /--------------------- Bostr.3359s0090.1.p [Boechera stricta] (4) | | | | | | /----- Carubv10008586m [Capsella rubella] (13) | | | /-100+ | | | | \----- Cagra.7865s0024.1.p [Capsella grandiflora] (96) | | /-100+ /-100+ | | | | | | /----- Csa17g053090.1 [Camelina sativa] (40) /-100+ | | | | \-100+ | | | | | | \----- Csa14g042820.1 [Camelina sativa] (53) | | | | \-100-+ | | | | | /---------- AT1G32640.1 [Arabidopsis thaliana] (81) | | \----51---+ | | | | | \-100+ /----- Araha.8375s0001.1.p [Arabidopsis halleri] (86) | | | \-84-+ | | | \----- 890840 [Arabidopsis lyrata] (95) /-100-+ | | | | | \-------------------------- KFK45000.1 [Arabis alpina] (90) | | | | | \----------------------------------------- AA53G00247 [Aethionema arabicum] (18) | | | | /----- XP_010540785.1 [Tarenaya hassleriana] (25) | | | | \-------------------100------------------+----- XP_010538366.1 [Tarenaya hassleriana] (35) | | | \----- XP_010531704.1 [Tarenaya hassleriana] (66) | | /----- Ciclev10011214m [Citrus clementina] (10) | /-100+ | | \----- orange1.1g005651m [Citrus sinensis] (43) | /-100+ | | | /----- Neem_22734_f_1 [Azadirachta indica] (11) | | \-100+ | /----72----+ \----- Neem_16938_f_1 [Azadirachta indica] (26) | | | | | | /----- EcC005899.20 [Eucalyptus camaldulensis] (47) | | \----82---+ | | \----- Eucgr.E00277.1.p [Eucalyptus grandis] (72) /-100+ | | | | /----- Gorai.004G184800.1 [Gossypium raimondii] (23) | | | /-97-+ | | | | \----- Gh_D08G1707 [Gossypium hirsutum] (59) | | | /-100+ | | | | \---------- Gh_A08G1412 [Gossypium hirsutum] (39) | | | | | | | | /----- Cotton_A_07316_BGI-A2_v1.0 [Gossypium arboreum] (27) | | /-72-+ | /-99-+ | | | | | | \----- Gh_A09G2341 [Gossypium hirsutum] (33) | | | | |-100+ | | | | | | /----- Gh_D09G1895 [Gossypium hirsutum] (32) | | | | /--51-+ \-99-+ | | | | | | \----- Gorai.006G216700.1 [Gossypium raimondii] (62) | | | | | | | | | | | |--------------- Thecc1EG015714t1 [Theobroma cacao] (38) | | | | | | | | | | | | /----- Gh_D12G2074 [Gossypium hirsutum] (77) | | | | | | /-66-+ /-99-+ | | | | | | \----- Gorai.008G226300.1 [Gossypium raimondii] (94) | | | | \-96-+ \-100+ | | \---------94---------+ | | /----- Cotton_A_07908_BGI-A2_v1.0 [Gossypium arboreum] (78) | | | | \-100+ | | | | \----- Gh_A12G1893 [Gossypium hirsutum] (91) | | | | | | | | /----- Gorai.003G182100.1 [Gossypium raimondii] (37) | | | | /-99-+ | | | | | \----- Gh_D03G1849 [Gossypium hirsutum] (70) | | | \----100---+ | | | | /----- Gh_A03G0010 [Gossypium hirsutum] (45) | | | \-100+ | | | \----- Cotton_A_23114_BGI-A2_v1.0 [Gossypium arboreum] (50) | | | | | \------------------------------- evm.model.supercontig_71.72 [Carica papaya] (88) | | | | /---------- XP_010559309.1 [Tarenaya hassleriana] (15) | | | | \----------------------100---------------------+ /----- XP_010530031.1 [Tarenaya hassleriana] (29) | \-100+ | \----- XP_010538501.1 [Tarenaya hassleriana] (87) | | /----- Carubv10004392m [Capsella rubella] (8) --100+ /---100---+ | | \----- Cagra.3356s0080.1.p [Capsella grandiflora] (52) | | | /--53-+ /----- Csa10g027420.1 [Camelina sativa] (36) | | | /-55-+ | | | | \----- Csa11g030670.1 [Camelina sativa] (61) | /-100+ \-100+ | | | \---------- Csa12g045650.1 [Camelina sativa] (65) | | | | | \--------------------- Bostr.30275s0255.1.p [Boechera stricta] (54) | /------100-----+ | | | /---------- AT4G17880.1 [Arabidopsis thaliana] (9) | | | | | | \------100------+ /----- 493087 [Arabidopsis lyrata] (64) | | \-100+ | | \----- Araha.2292s0001.1.p [Arabidopsis halleri] (74) | | | | /----- RrC3065_p2 [Raphanus raphanistrum] (14) | | /---100---+ | | | \----- Rsa1.0_00191.1_g00036.1 [Raphanus sativus] (76) | | | | | /-100-+ /----- GSBRNA2T00131278001 [Brassica napus] (17) \---------100--------+ | | /-100+ | | | | \----- XP_009131125.1 [Brassica rapa] (60) | | \-100+ | /-100+ | /----- XP_013605597.1 [Brassica oleracea] (21) | | | \-100+ | | | \----- GSBRNA2T00080269001 [Brassica napus] (69) | /-71-+ | | | | \--------------------- 676728310 [Sisymbrium irio] (79) | | | | /-100+ \-------------------------- Tp7g16240 [Thellungiella parvula] (22) | | | \-99-+ \------------------------------- Thhalv10024688m [Eutrema salsugineum] (63) | \------------------------------------ KFK28472.1 [Arabis alpina] (67) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00058078001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009114329.1 [Brassica rapa] (7) | | /------ Rsa1.0_02220.1_g00001.1 [Raphanus sativus] (2) | /-----------------------100-----------------------+ | | \------ RrC4697_p2 [Raphanus raphanistrum] (12) | | | | /------ (162) | | /---------------100--------------+ | | | \------ AA56G00010 [Aethionema arabicum] (6) | | | | | | /------ Cagra.0751s0023.1.p [Capsella grandiflora] (5) | | | /----100---+ | | | | \------ Carubv10028441m [Capsella rubella] (30) | | | | | | | /-100+ /------ Csa18g003270.1 [Camelina sativa] (20) | | | | | /-100+ + | /-100-+ | | | \------ Csa11g065190.1 [Camelina sativa] (82) | | | | /-100-+ \-100-+ | | | | | | \----------- Csa20g080920.1 [Camelina sativa] (93) | /-100+ | | | | | | | | | | \---------------------- Bostr.28243s0060.1.p [Boechera stricta] (19) | | | | | /-100+ | | | | | | | /------ Araha.11658s0006.1.p [Arabidopsis halleri] (44) | | | | | | | /-100+ | | | | | | | | \------ 916752 [Arabidopsis lyrata] (85) | | | /-68-+ \-100-+ \-------100------+ | | | | | | \----------- AT5G46760.1 [Arabidopsis thaliana] (51) | | | | | | | | | | | \--------------------------------- KFK31432.1 [Arabis alpina] (41) | | | | | | | | | | /------ Tp_un0036_004 [Thellungiella parvula] (31) | | | | | /-100+ | | | | | | \------ Tp2g11570 [Thellungiella parvula] (68) \-100-+ | | \---------------100---------------+ | \-100-+ \----------- Thhalv10000808m [Eutrema salsugineum] (89) | | | | /------ GSBRNA2T00023683001 [Brassica napus] (24) | | /-100+ | | | \------ XP_009101493.1 [Brassica rapa] (49) | | /-100-+ | | | | /------ XP_013598243.1 [Brassica oleracea] (34) | | | \-100+ | \---------------100--------------+ \------ GSBRNA2T00128661001 [Brassica napus] (73) | | | \----------------- 676778854 [Sisymbrium irio] (48) | | /------ XP_013612311.1 [Brassica oleracea] (55) \--------------------------99--------------------------+ \------ GSBRNA2T00115684001 [Brassica napus] (58) |